RNA–Protein interactions for RNA: ENST00000562119.5

PDXDC1-207, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5

Gene PDXDC1, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-207ENST00000562119 NISCHQ9Y2I1 1504 aa51.39■■■■■ 5.82
PDXDC1-207ENST00000562119 ABCC9O60706 1549 aa47.04■■■■■ 5.12
PDXDC1-207ENST00000562119 CCDC180Q9P1Z9 1646 aa46.31■■■■■ 5
PDXDC1-207ENST00000562119 DNAJC5BQ9UF47 199 aa44.8■■■■■ 4.76
PDXDC1-207ENST00000562119 RB1CC1Q8TDY2 1594 aa44.42■■■■■ 4.7
PDXDC1-207ENST00000562119 NACADO15069 1562 aa43.97■■■■■ 4.63
PDXDC1-207ENST00000562119 PABPN1Q86U42 306 aaKnown RBP eCLIP43.74■■■■■ 4.598e-6■□□□□ 8.9
PDXDC1-207ENST00000562119 DCAF8L2P0C7V8 631 aa43.67■■■■■ 4.58
PDXDC1-207ENST00000562119 UNC13AQ9UPW8 1703 aa43.39■■■■■ 4.54
PDXDC1-207ENST00000562119 BICRAQ9NZM4 1560 aa43.23■■■■■ 4.51
PDXDC1-207ENST00000562119 MYO15BQ96JP2 1530 aa43.17■■■■■ 4.5
PDXDC1-207ENST00000562119 SHROOM4Q9ULL8 1493 aa42.49■■■■■ 4.39
PDXDC1-207ENST00000562119 ZCCHC6Q5VYS8 1495 aaKnown RBP42.46■■■■■ 4.39
PDXDC1-207ENST00000562119 CECR2Q9BXF3 1484 aa42.43■■■■■ 4.38
PDXDC1-207ENST00000562119 CC2D2AQ9P2K1 1620 aa42.43■■■■■ 4.38
PDXDC1-207ENST00000562119 DCAF1Q9Y4B6 1507 aa42.38■■■■■ 4.37
PDXDC1-207ENST00000562119 SCRIBQ14160 1630 aa42.22■■■■■ 4.35
PDXDC1-207ENST00000562119 EIF4G1Q04637 1599 aaKnown RBP42.18■■■■■ 4.34
PDXDC1-207ENST00000562119 DNAJC5Q9H3Z4 198 aa41.53■■■■■ 4.24
PDXDC1-207ENST00000562119 CUX2O14529 1486 aa40.77■■■■■ 4.12
PDXDC1-207ENST00000562119 NCAPD3P42695 1498 aa40.65■■■■■ 4.1
PDXDC1-207ENST00000562119 ERCC6Q03468 1493 aa40.62■■■■■ 4.09
PDXDC1-207ENST00000562119 ATAD2BQ9ULI0 1458 aa40.45■■■■■ 4.07
PDXDC1-207ENST00000562119 NESP48681 1621 aa40.25■■■■■ 4.03
PDXDC1-207ENST00000562119 HMGXB3Q12766 1538 aa40.25■■■■■ 4.03
PDXDC1-207ENST00000562119 SMARCA2P51531 1590 aa40.23■■■■■ 4.03
PDXDC1-207ENST00000562119 SMARCA4P51532 1647 aa40.2■■■■■ 4.03
PDXDC1-207ENST00000562119 BAZ1BQ9UIG0 1483 aaKnown RBP39.99■■■■□ 3.99
PDXDC1-207ENST00000562119 THOC2Q8NI27 1593 aaKnown RBP39.92■■■■□ 3.98
PDXDC1-207ENST00000562119 BAZ1AQ9NRL2 1556 aaPredicted RBP39.89■■■■□ 3.98
PDXDC1-207ENST00000562119 PEG3Q9GZU2 1588 aa39.82■■■■□ 3.97
PDXDC1-207ENST00000562119 LAMC3Q9Y6N6 1575 aa39.78■■■■□ 3.96
PDXDC1-207ENST00000562119 KIF21AQ7Z4S6 1674 aa39.63■■■■□ 3.93
PDXDC1-207ENST00000562119 MROH2BQ7Z745 1585 aa39.62■■■■□ 3.93
PDXDC1-207ENST00000562119 PDS5BQ9NTI5 1447 aa39.59■■■■□ 3.93
PDXDC1-207ENST00000562119 TRIM41Q8WV44 630 aa39.43■■■■□ 3.9
PDXDC1-207ENST00000562119 CADPSQ9ULU8 1353 aa39.39■■■■□ 3.9
PDXDC1-207ENST00000562119 MRC2Q9UBG0 1479 aa39.3■■■■□ 3.88
PDXDC1-207ENST00000562119 WDR62O43379 1518 aa39.24■■■■□ 3.87
PDXDC1-207ENST00000562119 WIZO95785 1651 aa39.08■■■■□ 3.85
PDXDC1-207ENST00000562119 CEP164Q9UPV0 1460 aa39.01■■■■□ 3.84
PDXDC1-207ENST00000562119 FANCD2Q9BXW9 1451 aa38.93■■■■□ 3.82
PDXDC1-207ENST00000562119 OSCARQ8IYS5 282 aa38.82■■■■□ 3.8
PDXDC1-207ENST00000562119 CFTRP13569 1480 aa38.8■■■■□ 3.8
PDXDC1-207ENST00000562119 URB2Q14146 1524 aaKnown RBP38.68■■■■□ 3.78
PDXDC1-207ENST00000562119 RSF1Q96T23 1441 aaPredicted RBP38.57■■■■□ 3.77
PDXDC1-207ENST00000562119 TOP2AP11388 1531 aaKnown RBP38.53■■■■□ 3.76
PDXDC1-207ENST00000562119 RIMBP3CA6NJZ7 1639 aa38.37■■■■□ 3.73
PDXDC1-207ENST00000562119 RIMBP3BA6NNM3 1639 aa38.37■■■■□ 3.73
PDXDC1-207ENST00000562119 RIMBP3Q9UFD9 1639 aa38.37■■■■□ 3.73
PDXDC1-207ENST00000562119 ZNF608Q9ULD9 1512 aaPredicted RBP38.33■■■■□ 3.73
PDXDC1-207ENST00000562119 IFT140Q96RY7 1462 aa38.26■■■■□ 3.72
PDXDC1-207ENST00000562119 PRDM2Q13029 1718 aa38.22■■■■□ 3.71
PDXDC1-207ENST00000562119 ARHGEF11O15085 1522 aa38.2■■■■□ 3.71
PDXDC1-207ENST00000562119 CCDC88BA6NC98 1476 aa38.15■■■■□ 3.7
PDXDC1-207ENST00000562119 TOPBP1Q92547 1522 aa38.13■■■■□ 3.69
PDXDC1-207ENST00000562119 EIF4G3O43432 1585 aaKnown RBP38.02■■■■□ 3.68
PDXDC1-207ENST00000562119 CYB5RLQ6IPT4 315 aa37.99■■■■□ 3.67
PDXDC1-207ENST00000562119 ABCC8Q09428 1581 aa37.93■■■■□ 3.66
PDXDC1-207ENST00000562119 AQRO60306 1485 aaKnown RBP eCLIP37.9■■■■□ 3.663e-7■■■■□ 23.4
PDXDC1-207ENST00000562119 DNMBPQ6XZF7 1577 aa37.89■■■■□ 3.66
PDXDC1-207ENST00000562119 TARBP1Q13395 1621 aaKnown RBP37.83■■■■□ 3.65
PDXDC1-207ENST00000562119 CHD1O14646 1710 aa37.81■■■■□ 3.64
PDXDC1-207ENST00000562119 ARAP1Q96P48 1450 aa37.8■■■■□ 3.64
PDXDC1-207ENST00000562119 FBLN2P98095 1184 aa37.74■■■■□ 3.63
PDXDC1-207ENST00000562119 TRHP20396 242 aaPredicted RBP37.73■■■■□ 3.63
PDXDC1-207ENST00000562119 POLA1P09884 1462 aaPredicted RBP37.71■■■■□ 3.63
PDXDC1-207ENST00000562119 RAD54L2Q9Y4B4 1467 aa37.61■■■■□ 3.61
PDXDC1-207ENST00000562119 TDRD9Q8NDG6 1382 aaKnown RBP37.56■■■■□ 3.6
PDXDC1-207ENST00000562119 SOGA1O94964 1423 aa37.52■■■■□ 3.6
PDXDC1-207ENST00000562119 SNAPC4Q5SXM2 1469 aa37.45■■■■□ 3.59
PDXDC1-207ENST00000562119 CLASP1Q7Z460 1538 aa37.43■■■■□ 3.58
PDXDC1-207ENST00000562119 FGD5Q6ZNL6 1462 aa37.37■■■■□ 3.57
PDXDC1-207ENST00000562119 CHMP7Q8WUX9 453 aaPredicted RBP37.34■■■■□ 3.57
PDXDC1-207ENST00000562119 WDR97A6NE52 1622 aa37.32■■■■□ 3.57
PDXDC1-207ENST00000562119 MAGI1Q96QZ7 1491 aaPredicted RBP37.3■■■■□ 3.56
PDXDC1-207ENST00000562119 SYNJ1O43426 1573 aa37.29■■■■□ 3.56
PDXDC1-207ENST00000562119 CUX1P39880 1505 aa37.26■■■■□ 3.55
PDXDC1-207ENST00000562119 GRIN2BQ13224 1484 aa37.25■■■■□ 3.55
PDXDC1-207ENST00000562119 SYNJ2O15056 1496 aa37.2■■■■□ 3.55
PDXDC1-207ENST00000562119 GAPVD1Q14C86 1478 aa37.07■■■■□ 3.53
PDXDC1-207ENST00000562119 AEBP2Q6ZN18 517 aaPredicted RBP37.07■■■■□ 3.52
PDXDC1-207ENST00000562119 PBRM1Q86U86 1689 aa36.99■■■■□ 3.51
PDXDC1-207ENST00000562119 ABCA10Q8WWZ4 1543 aa36.9■■■■□ 3.5
PDXDC1-207ENST00000562119 ABCA5Q8WWZ7 1642 aa36.9■■■■□ 3.5
PDXDC1-207ENST00000562119 ERCC6L2Q5T890 1561 aa36.84■■■■□ 3.49
PDXDC1-207ENST00000562119 GRIN2AQ12879 1464 aa36.78■■■■□ 3.48
PDXDC1-207ENST00000562119 NUP160Q12769 1436 aa36.69■■■■□ 3.46
PDXDC1-207ENST00000562119 CEP170Q5SW79 1584 aa36.69■■■■□ 3.46
PDXDC1-207ENST00000562119 ADAMTS12P58397 1594 aa36.66■■■■□ 3.46
PDXDC1-207ENST00000562119 WRNQ14191 1432 aaPredicted RBP eCLIP36.62■■■■□ 3.45
PDXDC1-207ENST00000562119 SHROOM2Q13796 1616 aa36.57■■■■□ 3.44
PDXDC1-207ENST00000562119 FHAD1B1AJZ9 1412 aa36.54■■■■□ 3.44
PDXDC1-207ENST00000562119 TOP2BQ02880 1626 aa36.44■■■■□ 3.42
PDXDC1-207ENST00000562119 BIVM-ERCC5R4GMW8 1640 aa36.43■■■■□ 3.42
PDXDC1-207ENST00000562119 ERICH3Q5RHP9 1530 aa36.4■■■■□ 3.42
PDXDC1-207ENST00000562119 KIF13AQ9H1H9 1805 aa36.4■■■■□ 3.42
PDXDC1-207ENST00000562119 PRG4Q92954 1404 aaPredicted RBP36.39■■■■□ 3.42
PDXDC1-207ENST00000562119 SUPT5HO00267 1087 aaKnown RBP36.38■■■■□ 3.41
PDXDC1-207ENST00000562119 JPH4Q96JJ6 628 aa36.32■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms