RNA–Protein interactions for RNA: ENST00000325823.11

PDXDC1-201, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5 BASIC

Gene PDXDC1, Length 1,113 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-201ENST00000325823 AEBP2Q6ZN18 517 aaPredicted RBP18.82■□□□□ 0.6
PDXDC1-201ENST00000325823 CHIC1Q5VXU3 224 aa18.16■□□□□ 0.5
PDXDC1-201ENST00000325823 SENP3Q9H4L4 574 aaPredicted RBP16.15■□□□□ 0.18
PDXDC1-201ENST00000325823 NISCHQ9Y2I1 1504 aa16.09■□□□□ 0.17
PDXDC1-201ENST00000325823 PHF23Q9BUL5 403 aaPredicted RBP15.97■□□□□ 0.15
PDXDC1-201ENST00000325823 PLPPR3Q6T4P5 718 aa15.14■□□□□ 0.01
PDXDC1-201ENST00000325823 FOXD1Q16676 465 aa14.96□□□□□ -0.01
PDXDC1-201ENST00000325823 MSH5O43196 834 aa14.08□□□□□ -0.16
PDXDC1-201ENST00000325823 PPP6R1Q9UPN7 881 aa13.99□□□□□ -0.17
PDXDC1-201ENST00000325823 ADRA2BP18089 450 aa13.98□□□□□ -0.17
PDXDC1-201ENST00000325823 PIAS4Q8N2W9 510 aaPredicted RBP13.97□□□□□ -0.17
PDXDC1-201ENST00000325823 CCDC180Q9P1Z9 1646 aa13.93□□□□□ -0.18
PDXDC1-201ENST00000325823 KCNA4P22459 653 aa13.89□□□□□ -0.19
PDXDC1-201ENST00000325823 EHMT2Q96KQ7 1210 aa13.85□□□□□ -0.19
PDXDC1-201ENST00000325823 ZCCHC6Q5VYS8 1495 aaKnown RBP13.57□□□□□ -0.24
PDXDC1-201ENST00000325823 POTEDQ86YR6 584 aa13.53□□□□□ -0.24
PDXDC1-201ENST00000325823 SLC4A1APQ9BWU0 796 aaKnown RBP13.44□□□□□ -0.26
PDXDC1-201ENST00000325823 PPP4R3CPQ6ZMV5 832 aa13.38□□□□□ -0.27
PDXDC1-201ENST00000325823 CSRNP3Q8WYN3 585 aa13.38□□□□□ -0.27
PDXDC1-201ENST00000325823 NCBP3Q53F19 620 aaKnown RBP13.37□□□□□ -0.27
PDXDC1-201ENST00000325823 DCAF1Q9Y4B6 1507 aa13.36□□□□□ -0.27
PDXDC1-201ENST00000325823 SHROOM4Q9ULL8 1493 aa13.24□□□□□ -0.29
PDXDC1-201ENST00000325823 DCAF8L2P0C7V8 631 aa13.16□□□□□ -0.3
PDXDC1-201ENST00000325823 MYO15BQ96JP2 1530 aa13.11□□□□□ -0.31
PDXDC1-201ENST00000325823 NPM3O75607 178 aaKnown RBP13.03□□□□□ -0.32
PDXDC1-201ENST00000325823 SUPT5HO00267 1087 aaKnown RBP12.92□□□□□ -0.34
PDXDC1-201ENST00000325823 NACADO15069 1562 aa12.91□□□□□ -0.34
PDXDC1-201ENST00000325823 SCAF1Q9H7N4 1312 aaKnown RBP12.9□□□□□ -0.34
PDXDC1-201ENST00000325823 CNKSR2Q8WXI2 1034 aa12.89□□□□□ -0.35
PDXDC1-201ENST00000325823 ABCC9O60706 1549 aa12.83□□□□□ -0.35
PDXDC1-201ENST00000325823 DMRT2Q9Y5R5 561 aa12.81□□□□□ -0.36
PDXDC1-201ENST00000325823 SCRIBQ14160 1630 aa12.77□□□□□ -0.37
PDXDC1-201ENST00000325823 ZBTB22O15209 634 aa12.75□□□□□ -0.37
PDXDC1-201ENST00000325823 MAPK8IP2Q13387 824 aaPredicted RBP12.74□□□□□ -0.37
PDXDC1-201ENST00000325823 DNAJC5BQ9UF47 199 aa12.73□□□□□ -0.37
PDXDC1-201ENST00000325823 RB1CC1Q8TDY2 1594 aa12.73□□□□□ -0.37
PDXDC1-201ENST00000325823 FOXD4L1Q9NU39 408 aa12.65□□□□□ -0.38
PDXDC1-201ENST00000325823 RSF1Q96T23 1441 aaPredicted RBP12.58□□□□□ -0.4
PDXDC1-201ENST00000325823 SLC24A1O60721 1099 aa12.47□□□□□ -0.41
PDXDC1-201ENST00000325823 AMER1Q5JTC6 1135 aaPredicted RBP12.46□□□□□ -0.41
PDXDC1-201ENST00000325823 RNF216Q9NWF9 866 aaPredicted RBP12.45□□□□□ -0.42
PDXDC1-201ENST00000325823 BAZ1AQ9NRL2 1556 aaPredicted RBP12.43□□□□□ -0.42
PDXDC1-201ENST00000325823 CECR2Q9BXF3 1484 aa12.42□□□□□ -0.42
PDXDC1-201ENST00000325823 MROH2BQ7Z745 1585 aa12.4□□□□□ -0.42
PDXDC1-201ENST00000325823 HOXD11P31277 338 aaPredicted RBP12.4□□□□□ -0.42
PDXDC1-201ENST00000325823 UNC13AQ9UPW8 1703 aa12.39□□□□□ -0.43
PDXDC1-201ENST00000325823 RTN4Q9NQC3 1192 aaKnown RBP12.31□□□□□ -0.44
PDXDC1-201ENST00000325823 WIZO95785 1651 aa12.3□□□□□ -0.44
PDXDC1-201ENST00000325823 SMARCA4P51532 1647 aa12.29□□□□□ -0.44
PDXDC1-201ENST00000325823 BICRAQ9NZM4 1560 aa12.27□□□□□ -0.44
PDXDC1-201ENST00000325823 TOP2AP11388 1531 aaKnown RBP12.24□□□□□ -0.45
PDXDC1-201ENST00000325823 ATXN8OSP0DMR3 200 aa12.23□□□□□ -0.45
PDXDC1-201ENST00000325823 TRIM41Q8WV44 630 aa12.19□□□□□ -0.46
PDXDC1-201ENST00000325823 PEG3Q9GZU2 1588 aa12.16□□□□□ -0.46
PDXDC1-201ENST00000325823 PABPN1Q86U42 306 aaKnown RBP eCLIP12.15□□□□□ -0.46
PDXDC1-201ENST00000325823 SMARCA2P51531 1590 aa12.11□□□□□ -0.47
PDXDC1-201ENST00000325823 EIF4G1Q04637 1599 aaKnown RBP12.11□□□□□ -0.47
PDXDC1-201ENST00000325823 MYCNP04198 464 aaPredicted RBP12.11□□□□□ -0.47
PDXDC1-201ENST00000325823 CCDC88BA6NC98 1476 aa12.1□□□□□ -0.47
PDXDC1-201ENST00000325823 SLC4A2P04920 1241 aa12.1□□□□□ -0.47
PDXDC1-201ENST00000325823 DCAF8L1A6NGE4 600 aa12.09□□□□□ -0.47
PDXDC1-201ENST00000325823 FKBP8Q14318 412 aa12.05□□□□□ -0.48
PDXDC1-201ENST00000325823 LOC105371045A0A1W2PR82 267 aa12.03□□□□□ -0.48
PDXDC1-201ENST00000325823 ATAD2BQ9ULI0 1458 aa12.02□□□□□ -0.48
PDXDC1-201ENST00000325823 RNF39Q9H2S5 420 aa11.99□□□□□ -0.49
PDXDC1-201ENST00000325823 BAZ1BQ9UIG0 1483 aaKnown RBP11.99□□□□□ -0.49
PDXDC1-201ENST00000325823 CACNB1Q02641 598 aaPredicted RBP11.92□□□□□ -0.5
PDXDC1-201ENST00000325823 HMGXB3Q12766 1538 aa11.91□□□□□ -0.5
PDXDC1-201ENST00000325823 EEA1Q15075 1411 aa11.91□□□□□ -0.5
PDXDC1-201ENST00000325823 NCAPD3P42695 1498 aa11.9□□□□□ -0.5
PDXDC1-201ENST00000325823 FAM9AQ8IZU1 332 aaPredicted RBP11.9□□□□□ -0.5
PDXDC1-201ENST00000325823 ABCC8Q09428 1581 aa11.89□□□□□ -0.51
PDXDC1-201ENST00000325823 C1QBPQ07021 282 aaKnown RBP11.87□□□□□ -0.51
PDXDC1-201ENST00000325823 WRNQ14191 1432 aaPredicted RBP eCLIP11.85□□□□□ -0.51
PDXDC1-201ENST00000325823 TRIM26Q12899 539 aaPredicted RBP11.82□□□□□ -0.52
PDXDC1-201ENST00000325823 PCGF6Q9BYE7 350 aa11.82□□□□□ -0.52
PDXDC1-201ENST00000325823 HRCP23327 699 aa11.76□□□□□ -0.53
PDXDC1-201ENST00000325823 SOGA1O94964 1423 aa11.75□□□□□ -0.53
PDXDC1-201ENST00000325823 SYNJ1O43426 1573 aa11.75□□□□□ -0.53
PDXDC1-201ENST00000325823 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.73□□□□□ -0.53
PDXDC1-201ENST00000325823 HNRNPUL2Q1KMD3 747 aaKnown RBP11.73□□□□□ -0.53
PDXDC1-201ENST00000325823 TNIKQ9UKE5 1360 aa11.73□□□□□ -0.53
PDXDC1-201ENST00000325823 TOP2BQ02880 1626 aa11.72□□□□□ -0.53
PDXDC1-201ENST00000325823 BIVM-ERCC5R4GMW8 1640 aa11.71□□□□□ -0.54
PDXDC1-201ENST00000325823 CFTRP13569 1480 aa11.7□□□□□ -0.54
PDXDC1-201ENST00000325823 GOLGA3Q08378 1498 aa11.7□□□□□ -0.54
PDXDC1-201ENST00000325823 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.69□□□□□ -0.542e-7■■□□□ 12.1
PDXDC1-201ENST00000325823 KIF21BO75037 1637 aa11.68□□□□□ -0.54
PDXDC1-201ENST00000325823 SAMD1Q6SPF0 538 aaPredicted RBP11.68□□□□□ -0.54
PDXDC1-201ENST00000325823 CEP164Q9UPV0 1460 aa11.68□□□□□ -0.54
PDXDC1-201ENST00000325823 PRDM2Q13029 1718 aa11.66□□□□□ -0.54
PDXDC1-201ENST00000325823 RUSC2Q8N2Y8 1516 aa11.65□□□□□ -0.54
PDXDC1-201ENST00000325823 CC2D2AQ9P2K1 1620 aa11.64□□□□□ -0.55
PDXDC1-201ENST00000325823 CEP162Q5TB80 1403 aa11.64□□□□□ -0.55
PDXDC1-201ENST00000325823 UBTFP17480 764 aaKnown RBP11.62□□□□□ -0.55
PDXDC1-201ENST00000325823 CADPSQ9ULU8 1353 aa11.62□□□□□ -0.55
PDXDC1-201ENST00000325823 CUX1P39880 1505 aa11.59□□□□□ -0.55
PDXDC1-201ENST00000325823 ZEB1P37275 1124 aaPredicted RBP11.58□□□□□ -0.56
PDXDC1-201ENST00000325823 ATF5Q9Y2D1 282 aaPredicted RBP11.57□□□□□ -0.56
PDXDC1-201ENST00000325823 ERICH3Q5RHP9 1530 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms