RNA–Protein interactions for RNA: ENST00000566426.1

PDXDC1-213, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5

Gene PDXDC1, Length 283 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-213ENST00000566426 NISCHQ9Y2I1 1504 aa51.17■■■■■ 5.78
PDXDC1-213ENST00000566426 ABCC9O60706 1549 aa46.58■■■■■ 5.05
PDXDC1-213ENST00000566426 CCDC180Q9P1Z9 1646 aa46.1■■■■■ 4.97
PDXDC1-213ENST00000566426 RB1CC1Q8TDY2 1594 aa44.16■■■■■ 4.66
PDXDC1-213ENST00000566426 DNAJC5BQ9UF47 199 aa44.11■■■■■ 4.65
PDXDC1-213ENST00000566426 NACADO15069 1562 aa43.75■■■■■ 4.59
PDXDC1-213ENST00000566426 DCAF8L2P0C7V8 631 aa43.51■■■■■ 4.56
PDXDC1-213ENST00000566426 PABPN1Q86U42 306 aaKnown RBP eCLIP43.33■■■■■ 4.53
PDXDC1-213ENST00000566426 UNC13AQ9UPW8 1703 aa43.03■■■■■ 4.48
PDXDC1-213ENST00000566426 MYO15BQ96JP2 1530 aa43.01■■■■■ 4.48
PDXDC1-213ENST00000566426 BICRAQ9NZM4 1560 aa42.81■■■■■ 4.44
PDXDC1-213ENST00000566426 SHROOM4Q9ULL8 1493 aa42.3■■■■■ 4.36
PDXDC1-213ENST00000566426 ZCCHC6Q5VYS8 1495 aaKnown RBP42.28■■■■■ 4.36
PDXDC1-213ENST00000566426 DCAF1Q9Y4B6 1507 aa42.26■■■■■ 4.36
PDXDC1-213ENST00000566426 CECR2Q9BXF3 1484 aa42.04■■■■■ 4.32
PDXDC1-213ENST00000566426 CC2D2AQ9P2K1 1620 aa42.03■■■■■ 4.32
PDXDC1-213ENST00000566426 SCRIBQ14160 1630 aa41.95■■■■■ 4.31
PDXDC1-213ENST00000566426 EIF4G1Q04637 1599 aaKnown RBP41.84■■■■■ 4.29
PDXDC1-213ENST00000566426 DNAJC5Q9H3Z4 198 aa40.94■■■■■ 4.14
PDXDC1-213ENST00000566426 NCAPD3P42695 1498 aa40.4■■■■■ 4.06
PDXDC1-213ENST00000566426 CUX2O14529 1486 aa40.39■■■■■ 4.06
PDXDC1-213ENST00000566426 ERCC6Q03468 1493 aa40.31■■■■■ 4.04
PDXDC1-213ENST00000566426 ATAD2BQ9ULI0 1458 aa40.19■■■■■ 4.02
PDXDC1-213ENST00000566426 SMARCA2P51531 1590 aa40.07■■■■■ 4.01
PDXDC1-213ENST00000566426 HMGXB3Q12766 1538 aa40.02■■■■■ 4
PDXDC1-213ENST00000566426 SMARCA4P51532 1647 aa39.99■■■■□ 3.99
PDXDC1-213ENST00000566426 NESP48681 1621 aa39.84■■■■□ 3.97
PDXDC1-213ENST00000566426 BAZ1BQ9UIG0 1483 aaKnown RBP39.79■■■■□ 3.96
PDXDC1-213ENST00000566426 BAZ1AQ9NRL2 1556 aaPredicted RBP39.77■■■■□ 3.96
PDXDC1-213ENST00000566426 PEG3Q9GZU2 1588 aa39.62■■■■□ 3.93
PDXDC1-213ENST00000566426 LAMC3Q9Y6N6 1575 aa39.55■■■■□ 3.92
PDXDC1-213ENST00000566426 THOC2Q8NI27 1593 aaKnown RBP39.51■■■■□ 3.92
PDXDC1-213ENST00000566426 PDS5BQ9NTI5 1447 aa39.4■■■■□ 3.9
PDXDC1-213ENST00000566426 MROH2BQ7Z745 1585 aa39.38■■■■□ 3.9
PDXDC1-213ENST00000566426 KIF21AQ7Z4S6 1674 aa39.29■■■■□ 3.88
PDXDC1-213ENST00000566426 CADPSQ9ULU8 1353 aa39.18■■■■□ 3.86
PDXDC1-213ENST00000566426 MRC2Q9UBG0 1479 aa39.03■■■■□ 3.84
PDXDC1-213ENST00000566426 TRIM41Q8WV44 630 aa38.94■■■■□ 3.82
PDXDC1-213ENST00000566426 WDR62O43379 1518 aa38.92■■■■□ 3.82
PDXDC1-213ENST00000566426 WIZO95785 1651 aa38.87■■■■□ 3.81
PDXDC1-213ENST00000566426 CEP164Q9UPV0 1460 aa38.79■■■■□ 3.8
PDXDC1-213ENST00000566426 FANCD2Q9BXW9 1451 aa38.69■■■■□ 3.78
PDXDC1-213ENST00000566426 CFTRP13569 1480 aa38.6■■■■□ 3.77
PDXDC1-213ENST00000566426 OSCARQ8IYS5 282 aa38.55■■■■□ 3.76
PDXDC1-213ENST00000566426 RSF1Q96T23 1441 aaPredicted RBP38.44■■■■□ 3.74
PDXDC1-213ENST00000566426 TOP2AP11388 1531 aaKnown RBP38.38■■■■□ 3.74
PDXDC1-213ENST00000566426 URB2Q14146 1524 aaKnown RBP38.36■■■■□ 3.73
PDXDC1-213ENST00000566426 PRDM2Q13029 1718 aa38.09■■■■□ 3.69
PDXDC1-213ENST00000566426 IFT140Q96RY7 1462 aa38.04■■■■□ 3.68
PDXDC1-213ENST00000566426 CCDC88BA6NC98 1476 aa37.98■■■■□ 3.67
PDXDC1-213ENST00000566426 ZNF608Q9ULD9 1512 aaPredicted RBP37.97■■■■□ 3.67
PDXDC1-213ENST00000566426 RIMBP3CA6NJZ7 1639 aa37.94■■■■□ 3.66
PDXDC1-213ENST00000566426 RIMBP3BA6NNM3 1639 aa37.94■■■■□ 3.66
PDXDC1-213ENST00000566426 RIMBP3Q9UFD9 1639 aa37.94■■■■□ 3.66
PDXDC1-213ENST00000566426 TOPBP1Q92547 1522 aa37.89■■■■□ 3.66
PDXDC1-213ENST00000566426 ABCC8Q09428 1581 aa37.87■■■■□ 3.65
PDXDC1-213ENST00000566426 ARHGEF11O15085 1522 aa37.81■■■■□ 3.64
PDXDC1-213ENST00000566426 EIF4G3O43432 1585 aaKnown RBP37.72■■■■□ 3.63
PDXDC1-213ENST00000566426 DNMBPQ6XZF7 1577 aa37.71■■■■□ 3.63
PDXDC1-213ENST00000566426 CYB5RLQ6IPT4 315 aa37.64■■■■□ 3.62
PDXDC1-213ENST00000566426 AQRO60306 1485 aaKnown RBP eCLIP37.6■■■■□ 3.611e-13■■■■■ 38.4
PDXDC1-213ENST00000566426 TARBP1Q13395 1621 aaKnown RBP37.55■■■■□ 3.6
PDXDC1-213ENST00000566426 FBLN2P98095 1184 aa37.53■■■■□ 3.6
PDXDC1-213ENST00000566426 CHD1O14646 1710 aa37.5■■■■□ 3.59
PDXDC1-213ENST00000566426 POLA1P09884 1462 aaPredicted RBP37.47■■■■□ 3.59
PDXDC1-213ENST00000566426 TRHP20396 242 aaPredicted RBP37.41■■■■□ 3.58
PDXDC1-213ENST00000566426 ARAP1Q96P48 1450 aa37.39■■■■□ 3.58
PDXDC1-213ENST00000566426 SOGA1O94964 1423 aa37.36■■■■□ 3.57
PDXDC1-213ENST00000566426 RAD54L2Q9Y4B4 1467 aa37.33■■■■□ 3.57
PDXDC1-213ENST00000566426 TDRD9Q8NDG6 1382 aaKnown RBP37.31■■■■□ 3.56
PDXDC1-213ENST00000566426 WDR97A6NE52 1622 aa37.21■■■■□ 3.55
PDXDC1-213ENST00000566426 CHMP7Q8WUX9 453 aaPredicted RBP37.2■■■■□ 3.55
PDXDC1-213ENST00000566426 SNAPC4Q5SXM2 1469 aa37.19■■■■□ 3.54
PDXDC1-213ENST00000566426 FGD5Q6ZNL6 1462 aa37.17■■■■□ 3.54
PDXDC1-213ENST00000566426 MAGI1Q96QZ7 1491 aaPredicted RBP37.12■■■■□ 3.53
PDXDC1-213ENST00000566426 CLASP1Q7Z460 1538 aa37.1■■■■□ 3.53
PDXDC1-213ENST00000566426 SYNJ1O43426 1573 aa37.09■■■■□ 3.53
PDXDC1-213ENST00000566426 GRIN2BQ13224 1484 aa37.07■■■■□ 3.52
PDXDC1-213ENST00000566426 CUX1P39880 1505 aa37.04■■■■□ 3.52
PDXDC1-213ENST00000566426 SYNJ2O15056 1496 aa37■■■■□ 3.51
PDXDC1-213ENST00000566426 GAPVD1Q14C86 1478 aa36.88■■■■□ 3.49
PDXDC1-213ENST00000566426 PBRM1Q86U86 1689 aa36.8■■■■□ 3.48
PDXDC1-213ENST00000566426 ABCA10Q8WWZ4 1543 aa36.74■■■■□ 3.47
PDXDC1-213ENST00000566426 AEBP2Q6ZN18 517 aaPredicted RBP36.71■■■■□ 3.47
PDXDC1-213ENST00000566426 ABCA5Q8WWZ7 1642 aa36.67■■■■□ 3.46
PDXDC1-213ENST00000566426 GRIN2AQ12879 1464 aa36.56■■■■□ 3.44
PDXDC1-213ENST00000566426 WRNQ14191 1432 aaPredicted RBP eCLIP36.55■■■■□ 3.44
PDXDC1-213ENST00000566426 NUP160Q12769 1436 aa36.46■■■■□ 3.43
PDXDC1-213ENST00000566426 ERCC6L2Q5T890 1561 aa36.44■■■■□ 3.42
PDXDC1-213ENST00000566426 SUPT5HO00267 1087 aaKnown RBP36.44■■■■□ 3.42
PDXDC1-213ENST00000566426 ADAMTS12P58397 1594 aa36.44■■■■□ 3.42
PDXDC1-213ENST00000566426 CEP170Q5SW79 1584 aa36.41■■■■□ 3.42
PDXDC1-213ENST00000566426 FHAD1B1AJZ9 1412 aa36.4■■■■□ 3.42
PDXDC1-213ENST00000566426 TOP2BQ02880 1626 aa36.34■■■■□ 3.41
PDXDC1-213ENST00000566426 BIVM-ERCC5R4GMW8 1640 aa36.31■■■■□ 3.4
PDXDC1-213ENST00000566426 SHROOM2Q13796 1616 aa36.3■■■■□ 3.4
PDXDC1-213ENST00000566426 ERICH3Q5RHP9 1530 aa36.29■■■■□ 3.4
PDXDC1-213ENST00000566426 PRG4Q92954 1404 aaPredicted RBP36.17■■■■□ 3.38
PDXDC1-213ENST00000566426 JPH4Q96JJ6 628 aa36.17■■■■□ 3.38
PDXDC1-213ENST00000566426 KIF13AQ9H1H9 1805 aa36.05■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms