RNA–Protein interactions for RNA: ENST00000563679.5

PDXDC1-210, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-210ENST00000563679 NISCHQ9Y2I1 1504 aa21.49■■□□□ 1.03
PDXDC1-210ENST00000563679 CCDC180Q9P1Z9 1646 aa18.58■□□□□ 0.56
PDXDC1-210ENST00000563679 ZCCHC6Q5VYS8 1495 aaKnown RBP18.19■□□□□ 0.5
PDXDC1-210ENST00000563679 DCAF1Q9Y4B6 1507 aa17.85■□□□□ 0.45
PDXDC1-210ENST00000563679 SHROOM4Q9ULL8 1493 aa17.69■□□□□ 0.42
PDXDC1-210ENST00000563679 MYO15BQ96JP2 1530 aa17.46■□□□□ 0.39
PDXDC1-210ENST00000563679 DCAF8L2P0C7V8 631 aa17.28■□□□□ 0.36
PDXDC1-210ENST00000563679 SUPT5HO00267 1087 aaKnown RBP17.24■□□□□ 0.35
PDXDC1-210ENST00000563679 ABCC9O60706 1549 aa17.14■□□□□ 0.33
PDXDC1-210ENST00000563679 NACADO15069 1562 aa17.13■□□□□ 0.33
PDXDC1-210ENST00000563679 SCRIBQ14160 1630 aa17.04■□□□□ 0.32
PDXDC1-210ENST00000563679 CHIC1Q5VXU3 224 aa16.89■□□□□ 0.29
PDXDC1-210ENST00000563679 RSF1Q96T23 1441 aaPredicted RBP16.85■□□□□ 0.29
PDXDC1-210ENST00000563679 RB1CC1Q8TDY2 1594 aa16.83■□□□□ 0.29
PDXDC1-210ENST00000563679 CECR2Q9BXF3 1484 aa16.62■□□□□ 0.25
PDXDC1-210ENST00000563679 MROH2BQ7Z745 1585 aa16.61■□□□□ 0.25
PDXDC1-210ENST00000563679 UNC13AQ9UPW8 1703 aa16.6■□□□□ 0.25
PDXDC1-210ENST00000563679 BAZ1AQ9NRL2 1556 aaPredicted RBP16.55■□□□□ 0.24
PDXDC1-210ENST00000563679 WIZO95785 1651 aa16.5■□□□□ 0.23
PDXDC1-210ENST00000563679 SMARCA4P51532 1647 aa16.43■□□□□ 0.22
PDXDC1-210ENST00000563679 EIF4G1Q04637 1599 aaKnown RBP16.41■□□□□ 0.22
PDXDC1-210ENST00000563679 BICRAQ9NZM4 1560 aa16.38■□□□□ 0.21
PDXDC1-210ENST00000563679 TOP2AP11388 1531 aaKnown RBP16.37■□□□□ 0.21
PDXDC1-210ENST00000563679 PEG3Q9GZU2 1588 aa16.27■□□□□ 0.2
PDXDC1-210ENST00000563679 SMARCA2P51531 1590 aa16.24■□□□□ 0.19
PDXDC1-210ENST00000563679 TRIM41Q8WV44 630 aa16.21■□□□□ 0.19
PDXDC1-210ENST00000563679 LOC105371045A0A1W2PR82 267 aa16.19■□□□□ 0.18
PDXDC1-210ENST00000563679 CCDC88BA6NC98 1476 aa16.17■□□□□ 0.18
PDXDC1-210ENST00000563679 PABPN1Q86U42 306 aaKnown RBP eCLIP16.01■□□□□ 0.158e-6■□□□□ 8.9
PDXDC1-210ENST00000563679 ATAD2BQ9ULI0 1458 aa16■□□□□ 0.15
PDXDC1-210ENST00000563679 HRCP23327 699 aa16■□□□□ 0.15
PDXDC1-210ENST00000563679 ABCC8Q09428 1581 aa15.97■□□□□ 0.15
PDXDC1-210ENST00000563679 PCGF6Q9BYE7 350 aa15.95■□□□□ 0.14
PDXDC1-210ENST00000563679 BAZ1BQ9UIG0 1483 aaKnown RBP15.9■□□□□ 0.14
PDXDC1-210ENST00000563679 TRIM26Q12899 539 aaPredicted RBP15.9■□□□□ 0.14
PDXDC1-210ENST00000563679 EEA1Q15075 1411 aa15.89■□□□□ 0.13
PDXDC1-210ENST00000563679 FAM9AQ8IZU1 332 aaPredicted RBP15.86■□□□□ 0.13
PDXDC1-210ENST00000563679 HMGXB3Q12766 1538 aa15.85■□□□□ 0.13
PDXDC1-210ENST00000563679 WRNQ14191 1432 aaPredicted RBP eCLIP15.8■□□□□ 0.12
PDXDC1-210ENST00000563679 NCAPD3P42695 1498 aa15.8■□□□□ 0.12
PDXDC1-210ENST00000563679 SYNJ1O43426 1573 aa15.78■□□□□ 0.12
PDXDC1-210ENST00000563679 SOGA1O94964 1423 aa15.76■□□□□ 0.11
PDXDC1-210ENST00000563679 TNIKQ9UKE5 1360 aa15.72■□□□□ 0.11
PDXDC1-210ENST00000563679 KIF21BO75037 1637 aa15.7■□□□□ 0.1
PDXDC1-210ENST00000563679 BIVM-ERCC5R4GMW8 1640 aa15.7■□□□□ 0.1
PDXDC1-210ENST00000563679 TOP2BQ02880 1626 aa15.69■□□□□ 0.1
PDXDC1-210ENST00000563679 RUSC2Q8N2Y8 1516 aa15.68■□□□□ 0.1
PDXDC1-210ENST00000563679 GOLGA3Q08378 1498 aa15.66■□□□□ 0.1
PDXDC1-210ENST00000563679 CSRNP3Q8WYN3 585 aa15.65■□□□□ 0.1
PDXDC1-210ENST00000563679 CEP162Q5TB80 1403 aa15.65■□□□□ 0.1
PDXDC1-210ENST00000563679 PRDM2Q13029 1718 aa15.63■□□□□ 0.09
PDXDC1-210ENST00000563679 CEP164Q9UPV0 1460 aa15.61■□□□□ 0.09
PDXDC1-210ENST00000563679 CFTRP13569 1480 aa15.58■□□□□ 0.08
PDXDC1-210ENST00000563679 EHMT2Q96KQ7 1210 aa15.54■□□□□ 0.08
PDXDC1-210ENST00000563679 ZEB1P37275 1124 aaPredicted RBP15.53■□□□□ 0.08
PDXDC1-210ENST00000563679 CUX1P39880 1505 aa15.51■□□□□ 0.07
PDXDC1-210ENST00000563679 ERICH3Q5RHP9 1530 aa15.49■□□□□ 0.07
PDXDC1-210ENST00000563679 PPARGC1BQ86YN6 1023 aaKnown RBP15.47■□□□□ 0.07
PDXDC1-210ENST00000563679 PRXQ9BXM0 1461 aa15.44■□□□□ 0.06
PDXDC1-210ENST00000563679 RAPGEF2Q9Y4G8 1499 aa15.43■□□□□ 0.06
PDXDC1-210ENST00000563679 CC2D2AQ9P2K1 1620 aa15.42■□□□□ 0.06
PDXDC1-210ENST00000563679 UBTFP17480 764 aaKnown RBP15.4■□□□□ 0.06
PDXDC1-210ENST00000563679 CLIP1P30622 1438 aa15.39■□□□□ 0.05
PDXDC1-210ENST00000563679 CADPSQ9ULU8 1353 aa15.37■□□□□ 0.05
PDXDC1-210ENST00000563679 VPS8Q8N3P4 1428 aa15.37■□□□□ 0.05
PDXDC1-210ENST00000563679 KIF27Q86VH2 1401 aa15.35■□□□□ 0.05
PDXDC1-210ENST00000563679 ARAP1Q96P48 1450 aa15.25■□□□□ 0.03
PDXDC1-210ENST00000563679 DNMBPQ6XZF7 1577 aa15.22■□□□□ 0.03
PDXDC1-210ENST00000563679 FGD5Q6ZNL6 1462 aa15.22■□□□□ 0.03
PDXDC1-210ENST00000563679 FANCD2Q9BXW9 1451 aa15.21■□□□□ 0.03
PDXDC1-210ENST00000563679 CUX2O14529 1486 aa15.18■□□□□ 0.02
PDXDC1-210ENST00000563679 LAMC3Q9Y6N6 1575 aa15.18■□□□□ 0.02
PDXDC1-210ENST00000563679 IGF1RP08069 1367 aa15.18■□□□□ 0.02
PDXDC1-210ENST00000563679 ABCA10Q8WWZ4 1543 aa15.14■□□□□ 0.01
PDXDC1-210ENST00000563679 ARHGAP35Q9NRY4 1499 aa15.14■□□□□ 0.01
PDXDC1-210ENST00000563679 TOPBP1Q92547 1522 aa15.13■□□□□ 0.01
PDXDC1-210ENST00000563679 WDR97A6NE52 1622 aa15.12■□□□□ 0.01
PDXDC1-210ENST00000563679 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.12■□□□□ 0.01
PDXDC1-210ENST00000563679 CCER1Q8TC90 406 aaPredicted RBP15.1■□□□□ 0.01
PDXDC1-210ENST00000563679 MAP3K1Q13233 1512 aa15.1■□□□□ 0.01
PDXDC1-210ENST00000563679 POLA1P09884 1462 aaPredicted RBP15.09■□□□□ 0.01
PDXDC1-210ENST00000563679 CUL7Q14999 1698 aa15.08■□□□□ 0.01
PDXDC1-210ENST00000563679 CARMIL1Q5VZK9 1371 aa15.08■□□□□ 0
PDXDC1-210ENST00000563679 NESP48681 1621 aa15.06■□□□□ 0
PDXDC1-210ENST00000563679 APLP2Q06481 763 aa15.05■□□□□ -0
PDXDC1-210ENST00000563679 TTBK1Q5TCY1 1321 aaPredicted RBP15.03■□□□□ -0
PDXDC1-210ENST00000563679 RRBP1Q9P2E9 1410 aaKnown RBP15.03■□□□□ -0
PDXDC1-210ENST00000563679 URB2Q14146 1524 aaKnown RBP15.03■□□□□ -0
PDXDC1-210ENST00000563679 ABCA5Q8WWZ7 1642 aa15.02□□□□□ -0.01
PDXDC1-210ENST00000563679 RAD54L2Q9Y4B4 1467 aa15□□□□□ -0.01
PDXDC1-210ENST00000563679 CTTNBP2Q8WZ74 1663 aa15□□□□□ -0.01
PDXDC1-210ENST00000563679 EFCAB5A4FU69 1503 aa14.99□□□□□ -0.01
PDXDC1-210ENST00000563679 TIAM1Q13009 1591 aa14.99□□□□□ -0.01
PDXDC1-210ENST00000563679 CFAP43Q8NDM7 1665 aa14.98□□□□□ -0.01
PDXDC1-210ENST00000563679 PDS5BQ9NTI5 1447 aa14.97□□□□□ -0.01
PDXDC1-210ENST00000563679 KIF21AQ7Z4S6 1674 aa14.95□□□□□ -0.02
PDXDC1-210ENST00000563679 AQRO60306 1485 aaKnown RBP eCLIP14.94□□□□□ -0.023e-7■■■■□ 23.4
PDXDC1-210ENST00000563679 FHAD1B1AJZ9 1412 aa14.94□□□□□ -0.02
PDXDC1-210ENST00000563679 KANK4Q5T7N3 995 aaPredicted RBP14.94□□□□□ -0.02
PDXDC1-210ENST00000563679 TARBP1Q13395 1621 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms