RNA–Protein interactions for RNA: ENST00000319801.9

PUM2-201, Transcript of pumilio RNA binding family member 2, humanhuman

TSL 1 (best) BASIC

Gene PUM2, Length 6,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM2-201ENST00000319801 NISCHQ9Y2I1 1504 aa11.37□□□□□ -0.59
PUM2-201ENST00000319801 DCAF8L2P0C7V8 631 aa11.1□□□□□ -0.63
PUM2-201ENST00000319801 SUPT5HO00267 1087 aaKnown RBP10.64□□□□□ -0.71
PUM2-201ENST00000319801 SHROOM4Q9ULL8 1493 aa10.46□□□□□ -0.74
PUM2-201ENST00000319801 PELP1Q8IZL8 1130 aaKnown RBP10.35□□□□□ -0.75
PUM2-201ENST00000319801 APLP2Q06481 763 aa10.29□□□□□ -0.76
PUM2-201ENST00000319801 FAM9AQ8IZU1 332 aaPredicted RBP10.23□□□□□ -0.77
PUM2-201ENST00000319801 ZEB1P37275 1124 aaPredicted RBP10.2□□□□□ -0.78
PUM2-201ENST00000319801 TRIM41Q8WV44 630 aa10.04□□□□□ -0.8
PUM2-201ENST00000319801 EHMT2Q96KQ7 1210 aa10□□□□□ -0.81
PUM2-201ENST00000319801 CENPBP07199 599 aaPredicted RBP9.97□□□□□ -0.81
PUM2-201ENST00000319801 PCGF6Q9BYE7 350 aa9.94□□□□□ -0.82
PUM2-201ENST00000319801 CCER1Q8TC90 406 aaPredicted RBP9.87□□□□□ -0.83
PUM2-201ENST00000319801 UBTFP17480 764 aaKnown RBP9.83□□□□□ -0.84
PUM2-201ENST00000319801 TRIM26Q12899 539 aaPredicted RBP9.81□□□□□ -0.84
PUM2-201ENST00000319801 MYT1Q01538 1121 aa9.79□□□□□ -0.84
PUM2-201ENST00000319801 TTBK1Q5TCY1 1321 aaPredicted RBP9.71□□□□□ -0.85
PUM2-201ENST00000319801 CHIC1Q5VXU3 224 aa9.69□□□□□ -0.86
PUM2-201ENST00000319801 NEFLP07196 543 aa9.69□□□□□ -0.86
PUM2-201ENST00000319801 ATP1B4Q9UN42 357 aaPredicted RBP9.68□□□□□ -0.86
PUM2-201ENST00000319801 RANGAP1P46060 587 aaPredicted RBP9.66□□□□□ -0.86
PUM2-201ENST00000319801 ERICH6Q7L0X2 663 aa9.66□□□□□ -0.86
PUM2-201ENST00000319801 HRCP23327 699 aa9.65□□□□□ -0.86
PUM2-201ENST00000319801 CCDC180Q9P1Z9 1646 aa9.49□□□□□ -0.89
PUM2-201ENST00000319801 ZCCHC6Q5VYS8 1495 aaKnown RBP9.47□□□□□ -0.89
PUM2-201ENST00000319801 ABCC9O60706 1549 aa9.47□□□□□ -0.89
PUM2-201ENST00000319801 LOC105371045A0A1W2PR82 267 aa9.42□□□□□ -0.9
PUM2-201ENST00000319801 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.4□□□□□ -0.9
PUM2-201ENST00000319801 HNRNPUL2Q1KMD3 747 aaKnown RBP9.4□□□□□ -0.9
PUM2-201ENST00000319801 YTHDC1Q96MU7 727 aaKnown RBP9.4□□□□□ -0.91
PUM2-201ENST00000319801 PPARGC1BQ86YN6 1023 aaKnown RBP9.39□□□□□ -0.91
PUM2-201ENST00000319801 ITGAEP38570 1179 aa9.35□□□□□ -0.91
PUM2-201ENST00000319801 DAXXQ9UER7 740 aaPredicted RBP9.34□□□□□ -0.91
PUM2-201ENST00000319801 DIEXFQ68CQ4 756 aaKnown RBP9.32□□□□□ -0.92
PUM2-201ENST00000319801 MYT1LQ9UL68 1186 aa9.32□□□□□ -0.92
PUM2-201ENST00000319801 DCAF1Q9Y4B6 1507 aa9.31□□□□□ -0.92
PUM2-201ENST00000319801 CSRNP3Q8WYN3 585 aa9.3□□□□□ -0.92
PUM2-201ENST00000319801 PABPN1Q86U42 306 aaKnown RBP eCLIP9.3□□□□□ -0.92
PUM2-201ENST00000319801 CLSPNQ9HAW4 1339 aa9.29□□□□□ -0.92
PUM2-201ENST00000319801 FAM50AQ14320 339 aaKnown RBP9.25□□□□□ -0.93
PUM2-201ENST00000319801 ACIN1Q9UKV3 1341 aaKnown RBP9.24□□□□□ -0.93
PUM2-201ENST00000319801 EEA1Q15075 1411 aa9.23□□□□□ -0.93
PUM2-201ENST00000319801 SCRIBQ14160 1630 aa9.23□□□□□ -0.93
PUM2-201ENST00000319801 POLR3GLQ9BT43 218 aa9.22□□□□□ -0.93
PUM2-201ENST00000319801 ZNF316A6NFI3 1004 aaPredicted RBP9.21□□□□□ -0.93
PUM2-201ENST00000319801 CDK11AQ9UQ88 783 aaPredicted RBP9.21□□□□□ -0.93
PUM2-201ENST00000319801 ANP32CO43423 234 aa9.21□□□□□ -0.94
PUM2-201ENST00000319801 TRIM52Q96A61 297 aa9.2□□□□□ -0.94
PUM2-201ENST00000319801 RB1CC1Q8TDY2 1594 aa9.19□□□□□ -0.94
PUM2-201ENST00000319801 NACADO15069 1562 aa9.18□□□□□ -0.94
PUM2-201ENST00000319801 RTL5Q5HYW3 569 aaPredicted RBP9.15□□□□□ -0.94
PUM2-201ENST00000319801 NEUROD1Q13562 356 aa9.09□□□□□ -0.95
PUM2-201ENST00000319801 SLC4A1APQ9BWU0 796 aaKnown RBP9.07□□□□□ -0.96
PUM2-201ENST00000319801 RSF1Q96T23 1441 aaPredicted RBP9.05□□□□□ -0.96
PUM2-201ENST00000319801 TONSLQ96HA7 1378 aa9.04□□□□□ -0.96
PUM2-201ENST00000319801 GOLGA3Q08378 1498 aa9.04□□□□□ -0.96
PUM2-201ENST00000319801 NEFMP07197 916 aa9.03□□□□□ -0.96
PUM2-201ENST00000319801 FBLN2P98095 1184 aa9.03□□□□□ -0.96
PUM2-201ENST00000319801 ZBTB47Q9UFB7 747 aaPredicted RBP9.02□□□□□ -0.97
PUM2-201ENST00000319801 GTF3C3Q9Y5Q9 886 aa9.02□□□□□ -0.97
PUM2-201ENST00000319801 CLIP1P30622 1438 aa9.01□□□□□ -0.97
PUM2-201ENST00000319801 BAZ1AQ9NRL2 1556 aaPredicted RBP9.01□□□□□ -0.97
PUM2-201ENST00000319801 TNIKQ9UKE5 1360 aa8.98□□□□□ -0.97
PUM2-201ENST00000319801 CNGB1Q14028 1251 aaPredicted RBP8.98□□□□□ -0.97
PUM2-201ENST00000319801 ZNF326Q5BKZ1 582 aaKnown RBP8.98□□□□□ -0.97
PUM2-201ENST00000319801 CEP164Q9UPV0 1460 aa8.98□□□□□ -0.97
PUM2-201ENST00000319801 MYO15BQ96JP2 1530 aa8.98□□□□□ -0.97
PUM2-201ENST00000319801 WRNQ14191 1432 aaPredicted RBP eCLIP8.97□□□□□ -0.97
PUM2-201ENST00000319801 P3H3Q8IVL6 736 aa8.96□□□□□ -0.97
PUM2-201ENST00000319801 BAZ1BQ9UIG0 1483 aaKnown RBP8.95□□□□□ -0.98
PUM2-201ENST00000319801 KIF27Q86VH2 1401 aa8.95□□□□□ -0.98
PUM2-201ENST00000319801 MTUS2Q5JR59 1369 aa8.95□□□□□ -0.98
PUM2-201ENST00000319801 ANP32AP39687 249 aaKnown RBP8.94□□□□□ -0.98
PUM2-201ENST00000319801 CANXP27824 592 aaKnown RBP8.93□□□□□ -0.98
PUM2-201ENST00000319801 CEP162Q5TB80 1403 aa8.93□□□□□ -0.98
PUM2-201ENST00000319801 ZNF777Q9ULD5 760 aaPredicted RBP8.92□□□□□ -0.98
PUM2-201ENST00000319801 TSPY4P0CV99 314 aa8.91□□□□□ -0.98
PUM2-201ENST00000319801 TSPY10P0CW01 314 aa8.91□□□□□ -0.98
PUM2-201ENST00000319801 NPM1P06748 294 aaKnown RBP eCLIP8.9□□□□□ -0.98
PUM2-201ENST00000319801 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.89□□□□□ -0.99
PUM2-201ENST00000319801 TIMELESSQ9UNS1 1208 aa8.89□□□□□ -0.99
PUM2-201ENST00000319801 FHAD1B1AJZ9 1412 aa8.87□□□□□ -0.99
PUM2-201ENST00000319801 ESF1Q9H501 851 aaKnown RBP8.86□□□□□ -0.99
PUM2-201ENST00000319801 BCANQ96GW7 911 aa8.85□□□□□ -0.99
PUM2-201ENST00000319801 UPF2Q9HAU5 1272 aaKnown RBP8.85□□□□□ -0.99
PUM2-201ENST00000319801 EIF4G2P78344 907 aaKnown RBP eCLIP8.84□□□□□ -0.99
PUM2-201ENST00000319801 ARID3CA6NKF2 412 aa8.84□□□□□ -1
PUM2-201ENST00000319801 SLC24A1O60721 1099 aa8.83□□□□□ -1
PUM2-201ENST00000319801 CHMP7Q8WUX9 453 aaPredicted RBP8.83□□□□□ -1
PUM2-201ENST00000319801 CDCA8Q53HL2 280 aa8.82□□□□□ -1
PUM2-201ENST00000319801 HNRNPUQ00839 825 aaKnown RBP eCLIP8.82□□□□□ -1
PUM2-201ENST00000319801 SMARCA2P51531 1590 aa8.82□□□□□ -1
PUM2-201ENST00000319801 EIF5BO60841 1220 aaKnown RBP8.81□□□□□ -1
PUM2-201ENST00000319801 TMC1Q8TDI8 760 aa8.81□□□□□ -1
PUM2-201ENST00000319801 PLEKHD1A6NEE1 506 aa8.81□□□□□ -1
PUM2-201ENST00000319801 DDX10Q13206 875 aaKnown RBP8.8□□□□□ -1
PUM2-201ENST00000319801 FKBP8Q14318 412 aa8.79□□□□□ -1
PUM2-201ENST00000319801 WDR43Q15061 677 aaKnown RBP eCLIP8.78□□□□□ -1
PUM2-201ENST00000319801 ANP32BQ92688 251 aaKnown RBP8.78□□□□□ -1
PUM2-201ENST00000319801 STAG3Q9UJ98 1225 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms