RNA–Protein interactions for RNA: ENST00000563667.5

PDXDC1-209, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 4

Gene PDXDC1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-209ENST00000563667 NISCHQ9Y2I1 1504 aa35.71■■■■□ 3.31
PDXDC1-209ENST00000563667 CCDC180Q9P1Z9 1646 aa31.77■■■□□ 2.68
PDXDC1-209ENST00000563667 ABCC9O60706 1549 aa31.44■■■□□ 2.62
PDXDC1-209ENST00000563667 DCAF8L2P0C7V8 631 aa30.11■■■□□ 2.41
PDXDC1-209ENST00000563667 RB1CC1Q8TDY2 1594 aa30.08■■■□□ 2.41
PDXDC1-209ENST00000563667 NACADO15069 1562 aa29.97■■■□□ 2.39
PDXDC1-209ENST00000563667 ZCCHC6Q5VYS8 1495 aaKnown RBP29.89■■■□□ 2.38
PDXDC1-209ENST00000563667 MYO15BQ96JP2 1530 aa29.66■■■□□ 2.34
PDXDC1-209ENST00000563667 DCAF1Q9Y4B6 1507 aa29.5■■■□□ 2.31
PDXDC1-209ENST00000563667 PABPN1Q86U42 306 aaKnown RBP eCLIP29.38■■■□□ 2.29
PDXDC1-209ENST00000563667 UNC13AQ9UPW8 1703 aa29.28■■■□□ 2.28
PDXDC1-209ENST00000563667 BICRAQ9NZM4 1560 aa29.11■■■□□ 2.25
PDXDC1-209ENST00000563667 SCRIBQ14160 1630 aa29.07■■■□□ 2.24
PDXDC1-209ENST00000563667 DNAJC5BQ9UF47 199 aa29.02■■■□□ 2.24
PDXDC1-209ENST00000563667 SHROOM4Q9ULL8 1493 aa28.93■■■□□ 2.22
PDXDC1-209ENST00000563667 EIF4G1Q04637 1599 aaKnown RBP28.41■■■□□ 2.14
PDXDC1-209ENST00000563667 CC2D2AQ9P2K1 1620 aa28.36■■■□□ 2.13
PDXDC1-209ENST00000563667 CECR2Q9BXF3 1484 aa28.26■■■□□ 2.11
PDXDC1-209ENST00000563667 SMARCA4P51532 1647 aa27.73■■■□□ 2.03
PDXDC1-209ENST00000563667 BAZ1AQ9NRL2 1556 aaPredicted RBP27.69■■■□□ 2.02
PDXDC1-209ENST00000563667 NCAPD3P42695 1498 aa27.66■■■□□ 2.02
PDXDC1-209ENST00000563667 ATAD2BQ9ULI0 1458 aa27.66■■■□□ 2.02
PDXDC1-209ENST00000563667 SUPT5HO00267 1087 aaKnown RBP27.66■■■□□ 2.02
PDXDC1-209ENST00000563667 SMARCA2P51531 1590 aa27.61■■■□□ 2.01
PDXDC1-209ENST00000563667 MROH2BQ7Z745 1585 aa27.57■■■□□ 2
PDXDC1-209ENST00000563667 RSF1Q96T23 1441 aaPredicted RBP27.55■■■□□ 2
PDXDC1-209ENST00000563667 HMGXB3Q12766 1538 aa27.49■■□□□ 1.99
PDXDC1-209ENST00000563667 BAZ1BQ9UIG0 1483 aaKnown RBP27.46■■□□□ 1.99
PDXDC1-209ENST00000563667 PEG3Q9GZU2 1588 aa27.41■■□□□ 1.98
PDXDC1-209ENST00000563667 WIZO95785 1651 aa27.33■■□□□ 1.97
PDXDC1-209ENST00000563667 DNAJC5Q9H3Z4 198 aa27.17■■□□□ 1.94
PDXDC1-209ENST00000563667 ERCC6Q03468 1493 aa27.15■■□□□ 1.94
PDXDC1-209ENST00000563667 NESP48681 1621 aa27.1■■□□□ 1.93
PDXDC1-209ENST00000563667 TOP2AP11388 1531 aaKnown RBP27.05■■□□□ 1.92
PDXDC1-209ENST00000563667 LAMC3Q9Y6N6 1575 aa26.97■■□□□ 1.91
PDXDC1-209ENST00000563667 CADPSQ9ULU8 1353 aa26.88■■□□□ 1.89
PDXDC1-209ENST00000563667 CUX2O14529 1486 aa26.87■■□□□ 1.89
PDXDC1-209ENST00000563667 PDS5BQ9NTI5 1447 aa26.85■■□□□ 1.89
PDXDC1-209ENST00000563667 CCDC88BA6NC98 1476 aa26.77■■□□□ 1.88
PDXDC1-209ENST00000563667 KIF21AQ7Z4S6 1674 aa26.72■■□□□ 1.87
PDXDC1-209ENST00000563667 THOC2Q8NI27 1593 aaKnown RBP26.68■■□□□ 1.86
PDXDC1-209ENST00000563667 CFTRP13569 1480 aa26.64■■□□□ 1.86
PDXDC1-209ENST00000563667 FANCD2Q9BXW9 1451 aa26.59■■□□□ 1.85
PDXDC1-209ENST00000563667 MRC2Q9UBG0 1479 aa26.58■■□□□ 1.85
PDXDC1-209ENST00000563667 CEP164Q9UPV0 1460 aa26.57■■□□□ 1.84
PDXDC1-209ENST00000563667 WDR62O43379 1518 aa26.45■■□□□ 1.83
PDXDC1-209ENST00000563667 PRDM2Q13029 1718 aa26.34■■□□□ 1.81
PDXDC1-209ENST00000563667 URB2Q14146 1524 aaKnown RBP26.3■■□□□ 1.8
PDXDC1-209ENST00000563667 CHIC1Q5VXU3 224 aa26.22■■□□□ 1.79
PDXDC1-209ENST00000563667 TOPBP1Q92547 1522 aa26.11■■□□□ 1.77
PDXDC1-209ENST00000563667 ABCC8Q09428 1581 aa26.09■■□□□ 1.77
PDXDC1-209ENST00000563667 DNMBPQ6XZF7 1577 aa26.05■■□□□ 1.76
PDXDC1-209ENST00000563667 TRIM41Q8WV44 630 aa26.04■■□□□ 1.76
PDXDC1-209ENST00000563667 IFT140Q96RY7 1462 aa26.02■■□□□ 1.76
PDXDC1-209ENST00000563667 WRNQ14191 1432 aaPredicted RBP eCLIP25.97■■□□□ 1.75
PDXDC1-209ENST00000563667 ZNF608Q9ULD9 1512 aaPredicted RBP25.91■■□□□ 1.74
PDXDC1-209ENST00000563667 POLA1P09884 1462 aaPredicted RBP25.87■■□□□ 1.73
PDXDC1-209ENST00000563667 SYNJ1O43426 1573 aa25.85■■□□□ 1.73
PDXDC1-209ENST00000563667 CUX1P39880 1505 aa25.82■■□□□ 1.72
PDXDC1-209ENST00000563667 SOGA1O94964 1423 aa25.8■■□□□ 1.72
PDXDC1-209ENST00000563667 FGD5Q6ZNL6 1462 aa25.8■■□□□ 1.72
PDXDC1-209ENST00000563667 RAD54L2Q9Y4B4 1467 aa25.79■■□□□ 1.72
PDXDC1-209ENST00000563667 TARBP1Q13395 1621 aaKnown RBP25.79■■□□□ 1.72
PDXDC1-209ENST00000563667 EIF4G3O43432 1585 aaKnown RBP25.78■■□□□ 1.72
PDXDC1-209ENST00000563667 TOP2BQ02880 1626 aa25.77■■□□□ 1.72
PDXDC1-209ENST00000563667 OSCARQ8IYS5 282 aa25.77■■□□□ 1.72
PDXDC1-209ENST00000563667 AQRO60306 1485 aaKnown RBP eCLIP25.77■■□□□ 1.721e-13■■■■□ 23.4
PDXDC1-209ENST00000563667 BIVM-ERCC5R4GMW8 1640 aa25.74■■□□□ 1.71
PDXDC1-209ENST00000563667 TDRD9Q8NDG6 1382 aaKnown RBP25.7■■□□□ 1.71
PDXDC1-209ENST00000563667 FBLN2P98095 1184 aa25.6■■□□□ 1.69
PDXDC1-209ENST00000563667 WDR97A6NE52 1622 aa25.57■■□□□ 1.68
PDXDC1-209ENST00000563667 FAM9AQ8IZU1 332 aaPredicted RBP25.57■■□□□ 1.68
PDXDC1-209ENST00000563667 SNAPC4Q5SXM2 1469 aa25.52■■□□□ 1.68
PDXDC1-209ENST00000563667 GRIN2BQ13224 1484 aa25.51■■□□□ 1.67
PDXDC1-209ENST00000563667 ABCA10Q8WWZ4 1543 aa25.5■■□□□ 1.67
PDXDC1-209ENST00000563667 GAPVD1Q14C86 1478 aa25.48■■□□□ 1.67
PDXDC1-209ENST00000563667 CHD1O14646 1710 aa25.47■■□□□ 1.67
PDXDC1-209ENST00000563667 CHMP7Q8WUX9 453 aaPredicted RBP25.46■■□□□ 1.67
PDXDC1-209ENST00000563667 MAGI1Q96QZ7 1491 aaPredicted RBP25.44■■□□□ 1.66
PDXDC1-209ENST00000563667 RUSC2Q8N2Y8 1516 aa25.43■■□□□ 1.66
PDXDC1-209ENST00000563667 EEA1Q15075 1411 aa25.4■■□□□ 1.66
PDXDC1-209ENST00000563667 ABCA5Q8WWZ7 1642 aa25.39■■□□□ 1.66
PDXDC1-209ENST00000563667 PBRM1Q86U86 1689 aa25.39■■□□□ 1.65
PDXDC1-209ENST00000563667 KIF27Q86VH2 1401 aa25.37■■□□□ 1.65
PDXDC1-209ENST00000563667 SYNJ2O15056 1496 aa25.36■■□□□ 1.65
PDXDC1-209ENST00000563667 CSRNP3Q8WYN3 585 aa25.33■■□□□ 1.65
PDXDC1-209ENST00000563667 RIMBP3CA6NJZ7 1639 aa25.31■■□□□ 1.64
PDXDC1-209ENST00000563667 RIMBP3BA6NNM3 1639 aa25.31■■□□□ 1.64
PDXDC1-209ENST00000563667 RIMBP3Q9UFD9 1639 aa25.31■■□□□ 1.64
PDXDC1-209ENST00000563667 ARHGEF11O15085 1522 aa25.3■■□□□ 1.64
PDXDC1-209ENST00000563667 EHMT2Q96KQ7 1210 aa25.24■■□□□ 1.63
PDXDC1-209ENST00000563667 LOC105371045A0A1W2PR82 267 aa25.22■■□□□ 1.63
PDXDC1-209ENST00000563667 CLASP1Q7Z460 1538 aa25.2■■□□□ 1.62
PDXDC1-209ENST00000563667 ADAMTS12P58397 1594 aa25.19■■□□□ 1.62
PDXDC1-209ENST00000563667 ERICH3Q5RHP9 1530 aa25.19■■□□□ 1.62
PDXDC1-209ENST00000563667 FHAD1B1AJZ9 1412 aa25.18■■□□□ 1.62
PDXDC1-209ENST00000563667 GRIN2AQ12879 1464 aa25.17■■□□□ 1.62
PDXDC1-209ENST00000563667 CYB5RLQ6IPT4 315 aa25.16■■□□□ 1.62
PDXDC1-209ENST00000563667 IGF1RP08069 1367 aa25.16■■□□□ 1.62
PDXDC1-209ENST00000563667 ARAP1Q96P48 1450 aa25.08■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms