RNA–Protein interactions for RNA: ENST00000627450.2

PDXDC1-218, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-218ENST00000627450 NISCHQ9Y2I1 1504 aa30.88■■■□□ 2.53
PDXDC1-218ENST00000627450 CCDC180Q9P1Z9 1646 aa26.88■■□□□ 1.89
PDXDC1-218ENST00000627450 ZCCHC6Q5VYS8 1495 aaKnown RBP25.89■■□□□ 1.73
PDXDC1-218ENST00000627450 DCAF8L2P0C7V8 631 aa25.81■■□□□ 1.72
PDXDC1-218ENST00000627450 ABCC9O60706 1549 aa25.81■■□□□ 1.72
PDXDC1-218ENST00000627450 DCAF1Q9Y4B6 1507 aa25.4■■□□□ 1.66
PDXDC1-218ENST00000627450 SHROOM4Q9ULL8 1493 aa25.32■■□□□ 1.64
PDXDC1-218ENST00000627450 MYO15BQ96JP2 1530 aa25.13■■□□□ 1.61
PDXDC1-218ENST00000627450 NACADO15069 1562 aa25.11■■□□□ 1.61
PDXDC1-218ENST00000627450 RB1CC1Q8TDY2 1594 aa24.96■■□□□ 1.59
PDXDC1-218ENST00000627450 SCRIBQ14160 1630 aa24.89■■□□□ 1.58
PDXDC1-218ENST00000627450 UNC13AQ9UPW8 1703 aa24.53■■□□□ 1.52
PDXDC1-218ENST00000627450 PABPN1Q86U42 306 aaKnown RBP eCLIP24.39■■□□□ 1.498e-6■□□□□ 8.9
PDXDC1-218ENST00000627450 BICRAQ9NZM4 1560 aa24.29■■□□□ 1.48
PDXDC1-218ENST00000627450 SUPT5HO00267 1087 aaKnown RBP24.27■■□□□ 1.48
PDXDC1-218ENST00000627450 CECR2Q9BXF3 1484 aa24.12■■□□□ 1.45
PDXDC1-218ENST00000627450 RSF1Q96T23 1441 aaPredicted RBP23.94■■□□□ 1.42
PDXDC1-218ENST00000627450 MROH2BQ7Z745 1585 aa23.92■■□□□ 1.42
PDXDC1-218ENST00000627450 BAZ1AQ9NRL2 1556 aaPredicted RBP23.82■■□□□ 1.4
PDXDC1-218ENST00000627450 SMARCA4P51532 1647 aa23.77■■□□□ 1.4
PDXDC1-218ENST00000627450 WIZO95785 1651 aa23.72■■□□□ 1.39
PDXDC1-218ENST00000627450 EIF4G1Q04637 1599 aaKnown RBP23.56■■□□□ 1.36
PDXDC1-218ENST00000627450 ATAD2BQ9ULI0 1458 aa23.44■■□□□ 1.34
PDXDC1-218ENST00000627450 PEG3Q9GZU2 1588 aa23.41■■□□□ 1.34
PDXDC1-218ENST00000627450 TOP2AP11388 1531 aaKnown RBP23.37■■□□□ 1.33
PDXDC1-218ENST00000627450 SMARCA2P51531 1590 aa23.35■■□□□ 1.33
PDXDC1-218ENST00000627450 BAZ1BQ9UIG0 1483 aaKnown RBP23.3■■□□□ 1.32
PDXDC1-218ENST00000627450 CC2D2AQ9P2K1 1620 aa23.28■■□□□ 1.32
PDXDC1-218ENST00000627450 NCAPD3P42695 1498 aa23.22■■□□□ 1.31
PDXDC1-218ENST00000627450 CCDC88BA6NC98 1476 aa23.21■■□□□ 1.31
PDXDC1-218ENST00000627450 HMGXB3Q12766 1538 aa23.13■■□□□ 1.29
PDXDC1-218ENST00000627450 CHIC1Q5VXU3 224 aa23.05■■□□□ 1.28
PDXDC1-218ENST00000627450 DNAJC5BQ9UF47 199 aa23.01■■□□□ 1.27
PDXDC1-218ENST00000627450 ABCC8Q09428 1581 aa22.74■■□□□ 1.23
PDXDC1-218ENST00000627450 TRIM41Q8WV44 630 aa22.74■■□□□ 1.23
PDXDC1-218ENST00000627450 CFTRP13569 1480 aa22.69■■□□□ 1.22
PDXDC1-218ENST00000627450 CADPSQ9ULU8 1353 aa22.66■■□□□ 1.22
PDXDC1-218ENST00000627450 NESP48681 1621 aa22.63■■□□□ 1.21
PDXDC1-218ENST00000627450 WRNQ14191 1432 aaPredicted RBP eCLIP22.53■■□□□ 1.2
PDXDC1-218ENST00000627450 PRDM2Q13029 1718 aa22.47■■□□□ 1.19
PDXDC1-218ENST00000627450 SYNJ1O43426 1573 aa22.46■■□□□ 1.19
PDXDC1-218ENST00000627450 FAM9AQ8IZU1 332 aaPredicted RBP22.45■■□□□ 1.18
PDXDC1-218ENST00000627450 LAMC3Q9Y6N6 1575 aa22.43■■□□□ 1.18
PDXDC1-218ENST00000627450 FANCD2Q9BXW9 1451 aa22.43■■□□□ 1.18
PDXDC1-218ENST00000627450 CUX1P39880 1505 aa22.36■■□□□ 1.17
PDXDC1-218ENST00000627450 TOP2BQ02880 1626 aa22.32■■□□□ 1.16
PDXDC1-218ENST00000627450 PDS5BQ9NTI5 1447 aa22.3■■□□□ 1.16
PDXDC1-218ENST00000627450 LOC105371045A0A1W2PR82 267 aa22.28■■□□□ 1.16
PDXDC1-218ENST00000627450 SOGA1O94964 1423 aa22.28■■□□□ 1.16
PDXDC1-218ENST00000627450 CEP164Q9UPV0 1460 aa22.28■■□□□ 1.16
PDXDC1-218ENST00000627450 KIF21AQ7Z4S6 1674 aa22.27■■□□□ 1.16
PDXDC1-218ENST00000627450 BIVM-ERCC5R4GMW8 1640 aa22.27■■□□□ 1.16
PDXDC1-218ENST00000627450 EHMT2Q96KQ7 1210 aa22.25■■□□□ 1.15
PDXDC1-218ENST00000627450 RUSC2Q8N2Y8 1516 aa22.24■■□□□ 1.15
PDXDC1-218ENST00000627450 URB2Q14146 1524 aaKnown RBP22.17■■□□□ 1.14
PDXDC1-218ENST00000627450 TOPBP1Q92547 1522 aa22.15■■□□□ 1.14
PDXDC1-218ENST00000627450 FGD5Q6ZNL6 1462 aa22.14■■□□□ 1.13
PDXDC1-218ENST00000627450 DNMBPQ6XZF7 1577 aa22.13■■□□□ 1.13
PDXDC1-218ENST00000627450 ERCC6Q03468 1493 aa22.1■■□□□ 1.13
PDXDC1-218ENST00000627450 POLA1P09884 1462 aaPredicted RBP22.06■■□□□ 1.12
PDXDC1-218ENST00000627450 CSRNP3Q8WYN3 585 aa22.05■■□□□ 1.12
PDXDC1-218ENST00000627450 RAD54L2Q9Y4B4 1467 aa22.05■■□□□ 1.12
PDXDC1-218ENST00000627450 MRC2Q9UBG0 1479 aa22.03■■□□□ 1.12
PDXDC1-218ENST00000627450 EEA1Q15075 1411 aa22■■□□□ 1.11
PDXDC1-218ENST00000627450 CUX2O14529 1486 aa21.98■■□□□ 1.11
PDXDC1-218ENST00000627450 KIF27Q86VH2 1401 aa21.95■■□□□ 1.1
PDXDC1-218ENST00000627450 WDR62O43379 1518 aa21.9■■□□□ 1.1
PDXDC1-218ENST00000627450 THOC2Q8NI27 1593 aaKnown RBP21.9■■□□□ 1.1
PDXDC1-218ENST00000627450 ABCA10Q8WWZ4 1543 aa21.88■■□□□ 1.09
PDXDC1-218ENST00000627450 TDRD9Q8NDG6 1382 aaKnown RBP21.86■■□□□ 1.09
PDXDC1-218ENST00000627450 UBTFP17480 764 aaKnown RBP21.82■■□□□ 1.08
PDXDC1-218ENST00000627450 TARBP1Q13395 1621 aaKnown RBP21.82■■□□□ 1.08
PDXDC1-218ENST00000627450 IGF1RP08069 1367 aa21.82■■□□□ 1.08
PDXDC1-218ENST00000627450 RAPGEF2Q9Y4G8 1499 aa21.81■■□□□ 1.08
PDXDC1-218ENST00000627450 WDR97A6NE52 1622 aa21.8■■□□□ 1.08
PDXDC1-218ENST00000627450 GOLGA3Q08378 1498 aa21.77■■□□□ 1.08
PDXDC1-218ENST00000627450 KIF21BO75037 1637 aa21.76■■□□□ 1.07
PDXDC1-218ENST00000627450 PRXQ9BXM0 1461 aa21.75■■□□□ 1.07
PDXDC1-218ENST00000627450 AQRO60306 1485 aaKnown RBP eCLIP21.75■■□□□ 1.073e-7■■■■□ 23.4
PDXDC1-218ENST00000627450 ZNF608Q9ULD9 1512 aaPredicted RBP21.74■■□□□ 1.07
PDXDC1-218ENST00000627450 GAPVD1Q14C86 1478 aa21.73■■□□□ 1.07
PDXDC1-218ENST00000627450 IFT140Q96RY7 1462 aa21.71■■□□□ 1.07
PDXDC1-218ENST00000627450 ABCA5Q8WWZ7 1642 aa21.71■■□□□ 1.07
PDXDC1-218ENST00000627450 CARMIL1Q5VZK9 1371 aa21.7■■□□□ 1.06
PDXDC1-218ENST00000627450 TNIKQ9UKE5 1360 aa21.67■■□□□ 1.06
PDXDC1-218ENST00000627450 RANGAP1P46060 587 aaPredicted RBP21.67■■□□□ 1.06
PDXDC1-218ENST00000627450 ERICH3Q5RHP9 1530 aa21.63■■□□□ 1.05
PDXDC1-218ENST00000627450 CEP162Q5TB80 1403 aa21.6■■□□□ 1.05
PDXDC1-218ENST00000627450 EIF4G3O43432 1585 aaKnown RBP21.58■■□□□ 1.05
PDXDC1-218ENST00000627450 PBRM1Q86U86 1689 aa21.58■■□□□ 1.04
PDXDC1-218ENST00000627450 CUL7Q14999 1698 aa21.55■■□□□ 1.04
PDXDC1-218ENST00000627450 GRIN2BQ13224 1484 aa21.54■■□□□ 1.04
PDXDC1-218ENST00000627450 SNAPC4Q5SXM2 1469 aa21.48■■□□□ 1.03
PDXDC1-218ENST00000627450 CLIP1P30622 1438 aa21.47■■□□□ 1.03
PDXDC1-218ENST00000627450 FHAD1B1AJZ9 1412 aa21.45■■□□□ 1.02
PDXDC1-218ENST00000627450 ADAMTS12P58397 1594 aa21.45■■□□□ 1.02
PDXDC1-218ENST00000627450 FBLN2P98095 1184 aa21.41■■□□□ 1.02
PDXDC1-218ENST00000627450 CHMP7Q8WUX9 453 aaPredicted RBP21.36■■□□□ 1.01
PDXDC1-218ENST00000627450 MAGI1Q96QZ7 1491 aaPredicted RBP21.35■■□□□ 1.01
PDXDC1-218ENST00000627450 PPARGC1BQ86YN6 1023 aaKnown RBP21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms