RNA–Protein interactions for RNA: ENST00000565362.5

PDXDC1-211, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5

Gene PDXDC1, Length 720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-211ENST00000565362 NISCHQ9Y2I1 1504 aa26.83■■□□□ 1.89
PDXDC1-211ENST00000565362 CCDC180Q9P1Z9 1646 aa23.99■■□□□ 1.43
PDXDC1-211ENST00000565362 ABCC9O60706 1549 aa23.89■■□□□ 1.41
PDXDC1-211ENST00000565362 RB1CC1Q8TDY2 1594 aa22.8■■□□□ 1.24
PDXDC1-211ENST00000565362 NACADO15069 1562 aa22.69■■□□□ 1.22
PDXDC1-211ENST00000565362 DCAF8L2P0C7V8 631 aa22.54■■□□□ 1.2
PDXDC1-211ENST00000565362 MYO15BQ96JP2 1530 aa22.47■■□□□ 1.19
PDXDC1-211ENST00000565362 DNAJC5BQ9UF47 199 aa22.38■■□□□ 1.17
PDXDC1-211ENST00000565362 PABPN1Q86U42 306 aaKnown RBP eCLIP22.27■■□□□ 1.16
PDXDC1-211ENST00000565362 ZCCHC6Q5VYS8 1495 aaKnown RBP22.26■■□□□ 1.15
PDXDC1-211ENST00000565362 UNC13AQ9UPW8 1703 aa22.23■■□□□ 1.15
PDXDC1-211ENST00000565362 DCAF1Q9Y4B6 1507 aa22.21■■□□□ 1.15
PDXDC1-211ENST00000565362 BICRAQ9NZM4 1560 aa22.15■■□□□ 1.14
PDXDC1-211ENST00000565362 SHROOM4Q9ULL8 1493 aa21.9■■□□□ 1.1
PDXDC1-211ENST00000565362 SCRIBQ14160 1630 aa21.84■■□□□ 1.09
PDXDC1-211ENST00000565362 EIF4G1Q04637 1599 aaKnown RBP21.59■■□□□ 1.05
PDXDC1-211ENST00000565362 CC2D2AQ9P2K1 1620 aa21.58■■□□□ 1.05
PDXDC1-211ENST00000565362 CECR2Q9BXF3 1484 aa21.53■■□□□ 1.04
PDXDC1-211ENST00000565362 NCAPD3P42695 1498 aa20.99■□□□□ 0.95
PDXDC1-211ENST00000565362 ATAD2BQ9ULI0 1458 aa20.91■□□□□ 0.94
PDXDC1-211ENST00000565362 SMARCA4P51532 1647 aa20.88■□□□□ 0.93
PDXDC1-211ENST00000565362 SMARCA2P51531 1590 aa20.84■□□□□ 0.93
PDXDC1-211ENST00000565362 BAZ1AQ9NRL2 1556 aaPredicted RBP20.8■□□□□ 0.92
PDXDC1-211ENST00000565362 HMGXB3Q12766 1538 aa20.8■□□□□ 0.92
PDXDC1-211ENST00000565362 PEG3Q9GZU2 1588 aa20.72■□□□□ 0.91
PDXDC1-211ENST00000565362 BAZ1BQ9UIG0 1483 aaKnown RBP20.68■□□□□ 0.9
PDXDC1-211ENST00000565362 MROH2BQ7Z745 1585 aa20.66■□□□□ 0.9
PDXDC1-211ENST00000565362 ERCC6Q03468 1493 aa20.6■□□□□ 0.89
PDXDC1-211ENST00000565362 CUX2O14529 1486 aa20.58■□□□□ 0.89
PDXDC1-211ENST00000565362 NESP48681 1621 aa20.56■□□□□ 0.88
PDXDC1-211ENST00000565362 DNAJC5Q9H3Z4 198 aa20.48■□□□□ 0.87
PDXDC1-211ENST00000565362 LAMC3Q9Y6N6 1575 aa20.45■□□□□ 0.86
PDXDC1-211ENST00000565362 WIZO95785 1651 aa20.38■□□□□ 0.85
PDXDC1-211ENST00000565362 PDS5BQ9NTI5 1447 aa20.35■□□□□ 0.85
PDXDC1-211ENST00000565362 CADPSQ9ULU8 1353 aa20.34■□□□□ 0.85
PDXDC1-211ENST00000565362 THOC2Q8NI27 1593 aaKnown RBP20.33■□□□□ 0.84
PDXDC1-211ENST00000565362 RSF1Q96T23 1441 aaPredicted RBP20.29■□□□□ 0.84
PDXDC1-211ENST00000565362 KIF21AQ7Z4S6 1674 aa20.26■□□□□ 0.83
PDXDC1-211ENST00000565362 TOP2AP11388 1531 aaKnown RBP20.17■□□□□ 0.82
PDXDC1-211ENST00000565362 MRC2Q9UBG0 1479 aa20.14■□□□□ 0.81
PDXDC1-211ENST00000565362 CFTRP13569 1480 aa20.13■□□□□ 0.81
PDXDC1-211ENST00000565362 WDR62O43379 1518 aa20.1■□□□□ 0.81
PDXDC1-211ENST00000565362 FANCD2Q9BXW9 1451 aa20.07■□□□□ 0.8
PDXDC1-211ENST00000565362 CEP164Q9UPV0 1460 aa20.07■□□□□ 0.8
PDXDC1-211ENST00000565362 CCDC88BA6NC98 1476 aa19.95■□□□□ 0.78
PDXDC1-211ENST00000565362 URB2Q14146 1524 aaKnown RBP19.91■□□□□ 0.78
PDXDC1-211ENST00000565362 PRDM2Q13029 1718 aa19.84■□□□□ 0.77
PDXDC1-211ENST00000565362 TOPBP1Q92547 1522 aa19.71■□□□□ 0.75
PDXDC1-211ENST00000565362 ABCC8Q09428 1581 aa19.7■□□□□ 0.74
PDXDC1-211ENST00000565362 IFT140Q96RY7 1462 aa19.69■□□□□ 0.74
PDXDC1-211ENST00000565362 OSCARQ8IYS5 282 aa19.67■□□□□ 0.74
PDXDC1-211ENST00000565362 ZNF608Q9ULD9 1512 aaPredicted RBP19.64■□□□□ 0.73
PDXDC1-211ENST00000565362 DNMBPQ6XZF7 1577 aa19.63■□□□□ 0.73
PDXDC1-211ENST00000565362 TRIM41Q8WV44 630 aa19.55■□□□□ 0.72
PDXDC1-211ENST00000565362 POLA1P09884 1462 aaPredicted RBP19.52■□□□□ 0.72
PDXDC1-211ENST00000565362 TARBP1Q13395 1621 aaKnown RBP19.51■□□□□ 0.71
PDXDC1-211ENST00000565362 EIF4G3O43432 1585 aaKnown RBP19.5■□□□□ 0.71
PDXDC1-211ENST00000565362 AQRO60306 1485 aaKnown RBP eCLIP19.48■□□□□ 0.711e-13■■■■□ 23.4
PDXDC1-211ENST00000565362 SOGA1O94964 1423 aa19.43■□□□□ 0.7
PDXDC1-211ENST00000565362 RAD54L2Q9Y4B4 1467 aa19.43■□□□□ 0.7
PDXDC1-211ENST00000565362 SUPT5HO00267 1087 aaKnown RBP19.42■□□□□ 0.7
PDXDC1-211ENST00000565362 FGD5Q6ZNL6 1462 aa19.4■□□□□ 0.7
PDXDC1-211ENST00000565362 CUX1P39880 1505 aa19.4■□□□□ 0.7
PDXDC1-211ENST00000565362 TDRD9Q8NDG6 1382 aaKnown RBP19.38■□□□□ 0.69
PDXDC1-211ENST00000565362 WDR97A6NE52 1622 aa19.35■□□□□ 0.69
PDXDC1-211ENST00000565362 RIMBP3CA6NJZ7 1639 aa19.35■□□□□ 0.69
PDXDC1-211ENST00000565362 RIMBP3BA6NNM3 1639 aa19.35■□□□□ 0.69
PDXDC1-211ENST00000565362 RIMBP3Q9UFD9 1639 aa19.35■□□□□ 0.69
PDXDC1-211ENST00000565362 ARHGEF11O15085 1522 aa19.33■□□□□ 0.68
PDXDC1-211ENST00000565362 CHD1O14646 1710 aa19.31■□□□□ 0.68
PDXDC1-211ENST00000565362 FBLN2P98095 1184 aa19.29■□□□□ 0.68
PDXDC1-211ENST00000565362 SNAPC4Q5SXM2 1469 aa19.27■□□□□ 0.67
PDXDC1-211ENST00000565362 GRIN2BQ13224 1484 aa19.25■□□□□ 0.67
PDXDC1-211ENST00000565362 MAGI1Q96QZ7 1491 aaPredicted RBP19.24■□□□□ 0.67
PDXDC1-211ENST00000565362 ABCA10Q8WWZ4 1543 aa19.21■□□□□ 0.67
PDXDC1-211ENST00000565362 CHMP7Q8WUX9 453 aaPredicted RBP19.2■□□□□ 0.66
PDXDC1-211ENST00000565362 GAPVD1Q14C86 1478 aa19.19■□□□□ 0.66
PDXDC1-211ENST00000565362 CYB5RLQ6IPT4 315 aa19.18■□□□□ 0.66
PDXDC1-211ENST00000565362 SYNJ2O15056 1496 aa19.17■□□□□ 0.66
PDXDC1-211ENST00000565362 ARAP1Q96P48 1450 aa19.16■□□□□ 0.66
PDXDC1-211ENST00000565362 CLASP1Q7Z460 1538 aa19.15■□□□□ 0.66
PDXDC1-211ENST00000565362 WRNQ14191 1432 aaPredicted RBP eCLIP19.14■□□□□ 0.65
PDXDC1-211ENST00000565362 SYNJ1O43426 1573 aa19.14■□□□□ 0.65
PDXDC1-211ENST00000565362 ABCA5Q8WWZ7 1642 aa19.14■□□□□ 0.65
PDXDC1-211ENST00000565362 PBRM1Q86U86 1689 aa19.11■□□□□ 0.65
PDXDC1-211ENST00000565362 TOP2BQ02880 1626 aa19.11■□□□□ 0.65
PDXDC1-211ENST00000565362 BIVM-ERCC5R4GMW8 1640 aa19.11■□□□□ 0.65
PDXDC1-211ENST00000565362 GRIN2AQ12879 1464 aa19■□□□□ 0.63
PDXDC1-211ENST00000565362 ADAMTS12P58397 1594 aa18.98■□□□□ 0.63
PDXDC1-211ENST00000565362 FHAD1B1AJZ9 1412 aa18.97■□□□□ 0.63
PDXDC1-211ENST00000565362 ERICH3Q5RHP9 1530 aa18.96■□□□□ 0.63
PDXDC1-211ENST00000565362 NUP160Q12769 1436 aa18.96■□□□□ 0.63
PDXDC1-211ENST00000565362 CEP170Q5SW79 1584 aa18.91■□□□□ 0.62
PDXDC1-211ENST00000565362 TRHP20396 242 aaPredicted RBP18.9■□□□□ 0.62
PDXDC1-211ENST00000565362 ERCC6L2Q5T890 1561 aa18.85■□□□□ 0.61
PDXDC1-211ENST00000565362 SHROOM2Q13796 1616 aa18.83■□□□□ 0.61
PDXDC1-211ENST00000565362 IGF1RP08069 1367 aa18.78■□□□□ 0.6
PDXDC1-211ENST00000565362 JPH4Q96JJ6 628 aa18.77■□□□□ 0.6
PDXDC1-211ENST00000565362 KIF27Q86VH2 1401 aa18.76■□□□□ 0.59
PDXDC1-211ENST00000565362 PRG4Q92954 1404 aaPredicted RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms