Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 SPDL1-216ENST00000629457 340 ntTSL 5 BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 RAB43-205ENST00000393308 4193 ntAPPRIS P1 TSL 4 BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 CDK5RAP2-201ENST00000349780 6228 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 KLHL3-207ENST00000506491 6566 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 CENPO-206ENST00000473706 4272 ntTSL 2 BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 LINC01511-202ENST00000504989 1616 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 GNG12-AS1-203ENST00000420587 2232 ntTSL 2 BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 SPATS2L-205ENST00000409151 1979 ntTSL 2 BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 POC5-213ENST00000514838 1984 ntTSL 5 BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 TXNL1-201ENST00000217515 6894 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 LINC01686-201ENST00000566297 1376 ntBASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 FAM156B-203ENST00000593751 2942 ntAPPRIS P2 TSL 2 BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 FAM156A-201ENST00000596733 2942 ntAPPRIS P2 TSL 2 BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 PALM2-202ENST00000374531 4492 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 HFE-204ENST00000349999 1704 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 LINC00477-201ENST00000483544 1710 ntTSL 2 BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 C9orf64-201ENST00000314700 2067 ntTSL 2 BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 PRAMEF18-202ENST00000624297 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 NIP7-201ENST00000254940 2402 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 QARS-202ENST00000414533 2412 ntTSL 2 BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 RIC8A-203ENST00000526104 3703 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 HP-203ENST00000357763 1482 ntTSL 5 BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 DHX8-201ENST00000262415 5558 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 TBC1D16-201ENST00000310924 10936 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 AP000821.1-201ENST00000567082 1909 ntBASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 AC004847.1-201ENST00000568457 1911 ntBASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 AP3S2-201ENST00000336418 5891 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 CAPN1-208ENST00000527323 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 ZNF800-202ENST00000393312 2375 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 CLEC4F-202ENST00000426626 2012 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 OXNAD1-206ENST00000605932 1681 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 SLC12A8-202ENST00000430155 2831 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 TYR-201ENST00000263321 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 PTPN7-202ENST00000367279 3265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 C4orf50-201ENST00000324058 5201 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 ADAMTSL2-202ENST00000393060 3725 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 COL4A5-201ENST00000328300 6483 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 COL4A5-202ENST00000361603 6469 ntAPPRIS P3 TSL 2 BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 TUFT1-202ENST00000368848 3033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 UBE2A-211ENST00000631185 1435 ntTSL 5 BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 SEH1L-201ENST00000262124 3494 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 AL645944.2-201ENST00000641702 1953 ntBASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 HKR1-204ENST00000544914 2854 ntTSL 2 BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 KLC2-202ENST00000394065 3755 ntTSL 2 BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 MAST4-203ENST00000403666 7586 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 GTF2H2-202ENST00000330280 2077 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 PCYOX1-204ENST00000433351 5345 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 SNU13-201ENST00000215956 1630 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 MTMR12-202ENST00000280285 4966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 ZBTB43-202ENST00000373464 5965 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 PHACTR3-203ENST00000361300 2162 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 CHMP3-201ENST00000263856 3171 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 PRPF40B-202ENST00000380281 3154 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 SPATA13-213ENST00000439928 1721 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 POLA2-201ENST00000265465 3744 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 DIAPH2-203ENST00000373049 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 FAM25A-201ENST00000343959 345 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 RN7SKP90-201ENST00000363013 335 ntBASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 LHX9-202ENST00000367388 758 ntTSL 2 BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 RIPPLY2-201ENST00000369687 521 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 PDCD4-AS1-201ENST00000420367 778 ntTSL 2 BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 RBPMSLP-201ENST00000433427 502 ntBASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 SYP-AS1-201ENST00000433499 542 ntTSL 2 BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 ESR1-208ENST00000443427 6357 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 SYNPR-205ENST00000465156 829 ntTSL 5 BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 ST3GAL6-207ENST00000468553 715 ntTSL 3 BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 RN7SL328P-201ENST00000484033 300 ntBASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 FAM153C-208ENST00000511189 926 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 AC016924.1-202ENST00000512435 447 ntTSL 3 BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 CETN3-203ENST00000522083 1026 ntTSL 2 BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 CETN3-204ENST00000522565 867 ntTSL 2 BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 AP002336.2-201ENST00000528607 539 ntTSL 5 BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 ACRBP-204ENST00000536350 1053 ntTSL 2 BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 HMGB1P8-201ENST00000558211 949 ntBASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 RABGGTA-218ENST00000560777 1197 ntTSL 5 BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 C16orf52-204ENST00000562695 695 ntTSL 2 BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 AL121992.3-201ENST00000606186 346 ntBASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 PTCHD1-AS-202ENST00000608254 557 ntTSL 4 BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 AL121658.1-201ENST00000608489 712 ntBASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 LDAH-213ENST00000626491 1179 ntTSL 2 BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 FAM102A-202ENST00000373084 3352 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 AL050303.4-201ENST00000624520 1839 ntBASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 RNF144A-AS1-201ENST00000418970 2374 ntTSL 5 BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 AC021752.1-202ENST00000613161 2398 ntTSL 2 BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 ADAMTSL3-201ENST00000286744 7336 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 PSMD1-202ENST00000373635 3230 ntTSL 5 BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 NLRP2-206ENST00000427260 3411 ntTSL 2 BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 NPAP1P3-201ENST00000432327 1586 ntBASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 ZFAT-208ENST00000520356 4273 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 ACO1-202ENST00000379923 3601 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 AL109618.1-201ENST00000434910 1683 ntBASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 ALOXE3-201ENST00000318227 3053 ntTSL 2 BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 PGGHG-202ENST00000409479 3062 ntTSL 5 BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 CDKL1-203ENST00000395834 1775 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 PMEL-218ENST00000552882 2516 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 192.1 ms