RNA–Protein interactions for RNA: ENST00000629457.2

SPDL1-216, Transcript of spindle apparatus coiled-coil protein 1, humanhuman

TSL 5 BASIC

Gene SPDL1, Length 340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1-216ENST00000629457 NISCHQ9Y2I1 1504 aa29.45■■■□□ 2.31
SPDL1-216ENST00000629457 ABCC9O60706 1549 aa26.39■■□□□ 1.81
SPDL1-216ENST00000629457 CCDC180Q9P1Z9 1646 aa26.35■■□□□ 1.81
SPDL1-216ENST00000629457 RB1CC1Q8TDY2 1594 aa25.06■■□□□ 1.6
SPDL1-216ENST00000629457 NACADO15069 1562 aa24.91■■□□□ 1.58
SPDL1-216ENST00000629457 DCAF8L2P0C7V8 631 aa24.86■■□□□ 1.57
SPDL1-216ENST00000629457 DNAJC5BQ9UF47 199 aa24.8■■□□□ 1.56
SPDL1-216ENST00000629457 PABPN1Q86U42 306 aaKnown RBP eCLIP24.61■■□□□ 1.53
SPDL1-216ENST00000629457 MYO15BQ96JP2 1530 aa24.57■■□□□ 1.52
SPDL1-216ENST00000629457 UNC13AQ9UPW8 1703 aa24.55■■□□□ 1.52
SPDL1-216ENST00000629457 ZCCHC6Q5VYS8 1495 aaKnown RBP24.42■■□□□ 1.5
SPDL1-216ENST00000629457 BICRAQ9NZM4 1560 aa24.42■■□□□ 1.5
SPDL1-216ENST00000629457 DCAF1Q9Y4B6 1507 aa24.29■■□□□ 1.48
SPDL1-216ENST00000629457 SCRIBQ14160 1630 aa24.07■■□□□ 1.44
SPDL1-216ENST00000629457 SHROOM4Q9ULL8 1493 aa23.96■■□□□ 1.43
SPDL1-216ENST00000629457 CC2D2AQ9P2K1 1620 aa23.82■■□□□ 1.4
SPDL1-216ENST00000629457 EIF4G1Q04637 1599 aaKnown RBP23.78■■□□□ 1.4
SPDL1-216ENST00000629457 CECR2Q9BXF3 1484 aa23.74■■□□□ 1.39
SPDL1-216ENST00000629457 AEBP2Q6ZN18 517 aaPredicted RBP23.53■■□□□ 1.36
SPDL1-216ENST00000629457 NCAPD3P42695 1498 aa23.04■■□□□ 1.28
SPDL1-216ENST00000629457 ATAD2BQ9ULI0 1458 aa22.98■■□□□ 1.27
SPDL1-216ENST00000629457 SMARCA4P51532 1647 aa22.96■■□□□ 1.27
SPDL1-216ENST00000629457 SMARCA2P51531 1590 aa22.86■■□□□ 1.25
SPDL1-216ENST00000629457 HMGXB3Q12766 1538 aa22.83■■□□□ 1.25
SPDL1-216ENST00000629457 BAZ1AQ9NRL2 1556 aaPredicted RBP22.82■■□□□ 1.24
SPDL1-216ENST00000629457 BAZ1BQ9UIG0 1483 aaKnown RBP22.73■■□□□ 1.23
SPDL1-216ENST00000629457 MROH2BQ7Z745 1585 aa22.73■■□□□ 1.23
SPDL1-216ENST00000629457 PEG3Q9GZU2 1588 aa22.72■■□□□ 1.23
SPDL1-216ENST00000629457 ERCC6Q03468 1493 aa22.71■■□□□ 1.23
SPDL1-216ENST00000629457 NESP48681 1621 aa22.71■■□□□ 1.23
SPDL1-216ENST00000629457 DNAJC5Q9H3Z4 198 aa22.65■■□□□ 1.22
SPDL1-216ENST00000629457 CUX2O14529 1486 aa22.65■■□□□ 1.22
SPDL1-216ENST00000629457 LAMC3Q9Y6N6 1575 aa22.46■■□□□ 1.19
SPDL1-216ENST00000629457 WIZO95785 1651 aa22.46■■□□□ 1.19
SPDL1-216ENST00000629457 THOC2Q8NI27 1593 aaKnown RBP22.42■■□□□ 1.18
SPDL1-216ENST00000629457 KIF21AQ7Z4S6 1674 aa22.37■■□□□ 1.17
SPDL1-216ENST00000629457 CADPSQ9ULU8 1353 aa22.34■■□□□ 1.17
SPDL1-216ENST00000629457 PDS5BQ9NTI5 1447 aa22.33■■□□□ 1.17
SPDL1-216ENST00000629457 RSF1Q96T23 1441 aaPredicted RBP22.27■■□□□ 1.16
SPDL1-216ENST00000629457 CHIC1Q5VXU3 224 aa22.25■■□□□ 1.15
SPDL1-216ENST00000629457 MRC2Q9UBG0 1479 aa22.16■■□□□ 1.14
SPDL1-216ENST00000629457 TOP2AP11388 1531 aaKnown RBP22.13■■□□□ 1.13
SPDL1-216ENST00000629457 WDR62O43379 1518 aa22.11■■□□□ 1.13
SPDL1-216ENST00000629457 CFTRP13569 1480 aa22.09■■□□□ 1.13
SPDL1-216ENST00000629457 FANCD2Q9BXW9 1451 aa22.08■■□□□ 1.12
SPDL1-216ENST00000629457 CEP164Q9UPV0 1460 aa22.07■■□□□ 1.12
SPDL1-216ENST00000629457 CCDC88BA6NC98 1476 aa21.93■■□□□ 1.1
SPDL1-216ENST00000629457 URB2Q14146 1524 aaKnown RBP21.92■■□□□ 1.1
SPDL1-216ENST00000629457 PRDM2Q13029 1718 aa21.82■■□□□ 1.08
SPDL1-216ENST00000629457 TRIM41Q8WV44 630 aa21.68■■□□□ 1.06
SPDL1-216ENST00000629457 TOPBP1Q92547 1522 aa21.68■■□□□ 1.06
SPDL1-216ENST00000629457 ZNF608Q9ULD9 1512 aaPredicted RBP21.66■■□□□ 1.06
SPDL1-216ENST00000629457 OSCARQ8IYS5 282 aa21.65■■□□□ 1.06
SPDL1-216ENST00000629457 IFT140Q96RY7 1462 aa21.63■■□□□ 1.05
SPDL1-216ENST00000629457 DNMBPQ6XZF7 1577 aa21.57■■□□□ 1.04
SPDL1-216ENST00000629457 ABCC8Q09428 1581 aa21.57■■□□□ 1.04
SPDL1-216ENST00000629457 EIF4G3O43432 1585 aaKnown RBP21.49■■□□□ 1.03
SPDL1-216ENST00000629457 TARBP1Q13395 1621 aaKnown RBP21.49■■□□□ 1.03
SPDL1-216ENST00000629457 AQRO60306 1485 aaKnown RBP eCLIP21.46■■□□□ 1.03
SPDL1-216ENST00000629457 POLA1P09884 1462 aaPredicted RBP21.45■■□□□ 1.03
SPDL1-216ENST00000629457 RAD54L2Q9Y4B4 1467 aa21.42■■□□□ 1.02
SPDL1-216ENST00000629457 RIMBP3CA6NJZ7 1639 aa21.38■■□□□ 1.01
SPDL1-216ENST00000629457 RIMBP3BA6NNM3 1639 aa21.38■■□□□ 1.01
SPDL1-216ENST00000629457 RIMBP3Q9UFD9 1639 aa21.38■■□□□ 1.01
SPDL1-216ENST00000629457 SOGA1O94964 1423 aa21.36■■□□□ 1.01
SPDL1-216ENST00000629457 CUX1P39880 1505 aa21.34■■□□□ 1.01
SPDL1-216ENST00000629457 TDRD9Q8NDG6 1382 aaKnown RBP21.34■■□□□ 1.01
SPDL1-216ENST00000629457 FGD5Q6ZNL6 1462 aa21.33■■□□□ 1.01
SPDL1-216ENST00000629457 CHD1O14646 1710 aa21.33■■□□□ 1.01
SPDL1-216ENST00000629457 SUPT5HO00267 1087 aaKnown RBP21.33■■□□□ 1.01
SPDL1-216ENST00000629457 ARHGEF11O15085 1522 aa21.32■■□□□ 1
SPDL1-216ENST00000629457 FBLN2P98095 1184 aa21.28■■□□□ 1
SPDL1-216ENST00000629457 SNAPC4Q5SXM2 1469 aa21.21■□□□□ 0.99
SPDL1-216ENST00000629457 CYB5RLQ6IPT4 315 aa21.18■□□□□ 0.98
SPDL1-216ENST00000629457 WDR97A6NE52 1622 aa21.18■□□□□ 0.98
SPDL1-216ENST00000629457 GRIN2BQ13224 1484 aa21.14■□□□□ 0.98
SPDL1-216ENST00000629457 ARAP1Q96P48 1450 aa21.13■□□□□ 0.97
SPDL1-216ENST00000629457 MAGI1Q96QZ7 1491 aaPredicted RBP21.12■□□□□ 0.97
SPDL1-216ENST00000629457 CHMP7Q8WUX9 453 aaPredicted RBP21.11■□□□□ 0.97
SPDL1-216ENST00000629457 CLASP1Q7Z460 1538 aa21.1■□□□□ 0.97
SPDL1-216ENST00000629457 GAPVD1Q14C86 1478 aa21.09■□□□□ 0.97
SPDL1-216ENST00000629457 ABCA10Q8WWZ4 1543 aa21.08■□□□□ 0.96
SPDL1-216ENST00000629457 SYNJ2O15056 1496 aa21.07■□□□□ 0.96
SPDL1-216ENST00000629457 PBRM1Q86U86 1689 aa21.07■□□□□ 0.96
SPDL1-216ENST00000629457 ABCA5Q8WWZ7 1642 aa21.05■□□□□ 0.96
SPDL1-216ENST00000629457 SYNJ1O43426 1573 aa21.03■□□□□ 0.96
SPDL1-216ENST00000629457 WRNQ14191 1432 aaPredicted RBP eCLIP20.98■□□□□ 0.95
SPDL1-216ENST00000629457 TOP2BQ02880 1626 aa20.97■□□□□ 0.95
SPDL1-216ENST00000629457 BIVM-ERCC5R4GMW8 1640 aa20.97■□□□□ 0.95
SPDL1-216ENST00000629457 TRHP20396 242 aaPredicted RBP20.89■□□□□ 0.93
SPDL1-216ENST00000629457 GRIN2AQ12879 1464 aa20.88■□□□□ 0.93
SPDL1-216ENST00000629457 ADAMTS12P58397 1594 aa20.88■□□□□ 0.93
SPDL1-216ENST00000629457 CEP170Q5SW79 1584 aa20.84■□□□□ 0.93
SPDL1-216ENST00000629457 ERCC6L2Q5T890 1561 aa20.84■□□□□ 0.93
SPDL1-216ENST00000629457 NUP160Q12769 1436 aa20.82■□□□□ 0.92
SPDL1-216ENST00000629457 FHAD1B1AJZ9 1412 aa20.81■□□□□ 0.92
SPDL1-216ENST00000629457 ERICH3Q5RHP9 1530 aa20.79■□□□□ 0.92
SPDL1-216ENST00000629457 SHROOM2Q13796 1616 aa20.72■□□□□ 0.91
SPDL1-216ENST00000629457 PRG4Q92954 1404 aaPredicted RBP20.62■□□□□ 0.89
SPDL1-216ENST00000629457 JPH4Q96JJ6 628 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms