RNA–Protein interactions for RNA: ENST00000368848.6

TUFT1-202, Transcript of tuftelin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TUFT1, Length 3,033 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUFT1-202ENST00000368848 NISCHQ9Y2I1 1504 aa24.59■■□□□ 1.53
TUFT1-202ENST00000368848 SHROOM4Q9ULL8 1493 aa21.88■■□□□ 1.09
TUFT1-202ENST00000368848 SUPT5HO00267 1087 aaKnown RBP21.64■■□□□ 1.05
TUFT1-202ENST00000368848 MYO15BQ96JP2 1530 aa21.12■□□□□ 0.97
TUFT1-202ENST00000368848 HRCP23327 699 aa21.12■□□□□ 0.97
TUFT1-202ENST00000368848 PCGF6Q9BYE7 350 aa21.04■□□□□ 0.96
TUFT1-202ENST00000368848 CHIC1Q5VXU3 224 aa21■□□□□ 0.95
TUFT1-202ENST00000368848 PPARGC1BQ86YN6 1023 aaKnown RBP20.98■□□□□ 0.95
TUFT1-202ENST00000368848 CCDC180Q9P1Z9 1646 aa20.95■□□□□ 0.94
TUFT1-202ENST00000368848 DCAF8L2P0C7V8 631 aa20.9■□□□□ 0.94
TUFT1-202ENST00000368848 ZCCHC6Q5VYS8 1495 aaKnown RBP20.8■□□□□ 0.92
TUFT1-202ENST00000368848 LOC105371045A0A1W2PR82 267 aa20.66■□□□□ 0.9
TUFT1-202ENST00000368848 DCAF1Q9Y4B6 1507 aa20.33■□□□□ 0.84
TUFT1-202ENST00000368848 TRIM26Q12899 539 aaPredicted RBP20.24■□□□□ 0.83
TUFT1-202ENST00000368848 EHMT2Q96KQ7 1210 aa20.16■□□□□ 0.82
TUFT1-202ENST00000368848 FAM9AQ8IZU1 332 aaPredicted RBP20.08■□□□□ 0.81
TUFT1-202ENST00000368848 SCAF1Q9H7N4 1312 aaKnown RBP19.91■□□□□ 0.78
TUFT1-202ENST00000368848 TRIM41Q8WV44 630 aa19.91■□□□□ 0.78
TUFT1-202ENST00000368848 ZEB1P37275 1124 aaPredicted RBP19.83■□□□□ 0.77
TUFT1-202ENST00000368848 ABCC9O60706 1549 aa19.71■□□□□ 0.75
TUFT1-202ENST00000368848 RSF1Q96T23 1441 aaPredicted RBP19.71■□□□□ 0.75
TUFT1-202ENST00000368848 RB1CC1Q8TDY2 1594 aa19.65■□□□□ 0.74
TUFT1-202ENST00000368848 SCRIBQ14160 1630 aa19.65■□□□□ 0.74
TUFT1-202ENST00000368848 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.64■□□□□ 0.73
TUFT1-202ENST00000368848 PELP1Q8IZL8 1130 aaKnown RBP19.64■□□□□ 0.73
TUFT1-202ENST00000368848 TTBK1Q5TCY1 1321 aaPredicted RBP19.58■□□□□ 0.72
TUFT1-202ENST00000368848 CCER1Q8TC90 406 aaPredicted RBP19.51■□□□□ 0.71
TUFT1-202ENST00000368848 NEUROD1Q13562 356 aa19.5■□□□□ 0.71
TUFT1-202ENST00000368848 ACIN1Q9UKV3 1341 aaKnown RBP19.43■□□□□ 0.7
TUFT1-202ENST00000368848 NACADO15069 1562 aa19.38■□□□□ 0.69
TUFT1-202ENST00000368848 CECR2Q9BXF3 1484 aa19.36■□□□□ 0.69
TUFT1-202ENST00000368848 GTF3C3Q9Y5Q9 886 aa19.36■□□□□ 0.69
TUFT1-202ENST00000368848 DIEXFQ68CQ4 756 aaKnown RBP19.33■□□□□ 0.68
TUFT1-202ENST00000368848 MROH2BQ7Z745 1585 aa19.25■□□□□ 0.67
TUFT1-202ENST00000368848 YTHDC1Q96MU7 727 aaKnown RBP19.19■□□□□ 0.66
TUFT1-202ENST00000368848 WIZO95785 1651 aa19.19■□□□□ 0.66
TUFT1-202ENST00000368848 CENPBP07199 599 aaPredicted RBP19.17■□□□□ 0.66
TUFT1-202ENST00000368848 ABCC8Q09428 1581 aa19.05■□□□□ 0.64
TUFT1-202ENST00000368848 CCDC88BA6NC98 1476 aa19.01■□□□□ 0.63
TUFT1-202ENST00000368848 CEP162Q5TB80 1403 aa19■□□□□ 0.63
TUFT1-202ENST00000368848 UBTFP17480 764 aaKnown RBP18.98■□□□□ 0.63
TUFT1-202ENST00000368848 ZNF316A6NFI3 1004 aaPredicted RBP18.97■□□□□ 0.63
TUFT1-202ENST00000368848 SOGA1O94964 1423 aa18.96■□□□□ 0.63
TUFT1-202ENST00000368848 HNRNPUL2Q1KMD3 747 aaKnown RBP18.94■□□□□ 0.62
TUFT1-202ENST00000368848 MIER1Q8N108 512 aa18.92■□□□□ 0.62
TUFT1-202ENST00000368848 EIF4G1Q04637 1599 aaKnown RBP18.9■□□□□ 0.62
TUFT1-202ENST00000368848 RUSC2Q8N2Y8 1516 aa18.89■□□□□ 0.61
TUFT1-202ENST00000368848 BAZ1AQ9NRL2 1556 aaPredicted RBP18.89■□□□□ 0.61
TUFT1-202ENST00000368848 WRNQ14191 1432 aaPredicted RBP eCLIP18.87■□□□□ 0.61
TUFT1-202ENST00000368848 RANGAP1P46060 587 aaPredicted RBP18.83■□□□□ 0.6
TUFT1-202ENST00000368848 CSRNP3Q8WYN3 585 aa18.81■□□□□ 0.6
TUFT1-202ENST00000368848 TNIKQ9UKE5 1360 aa18.8■□□□□ 0.6
TUFT1-202ENST00000368848 UNC13AQ9UPW8 1703 aa18.75■□□□□ 0.59
TUFT1-202ENST00000368848 SMARCA4P51532 1647 aa18.72■□□□□ 0.59
TUFT1-202ENST00000368848 TOP2AP11388 1531 aaKnown RBP18.7■□□□□ 0.58
TUFT1-202ENST00000368848 SMARCA2P51531 1590 aa18.68■□□□□ 0.58
TUFT1-202ENST00000368848 MYT1Q01538 1121 aa18.66■□□□□ 0.58
TUFT1-202ENST00000368848 GOLGA3Q08378 1498 aa18.62■□□□□ 0.57
TUFT1-202ENST00000368848 APLP2Q06481 763 aa18.55■□□□□ 0.56
TUFT1-202ENST00000368848 CLIP1P30622 1438 aa18.54■□□□□ 0.56
TUFT1-202ENST00000368848 EEA1Q15075 1411 aa18.53■□□□□ 0.56
TUFT1-202ENST00000368848 BICRAQ9NZM4 1560 aa18.53■□□□□ 0.56
TUFT1-202ENST00000368848 PABPN1Q86U42 306 aaKnown RBP eCLIP18.52■□□□□ 0.56
TUFT1-202ENST00000368848 SUPT16HQ9Y5B9 1047 aaKnown RBP18.44■□□□□ 0.54
TUFT1-202ENST00000368848 CEP164Q9UPV0 1460 aa18.43■□□□□ 0.54
TUFT1-202ENST00000368848 VPS8Q8N3P4 1428 aa18.43■□□□□ 0.54
TUFT1-202ENST00000368848 PEG3Q9GZU2 1588 aa18.42■□□□□ 0.54
TUFT1-202ENST00000368848 SYNJ1O43426 1573 aa18.42■□□□□ 0.54
TUFT1-202ENST00000368848 RAPGEF2Q9Y4G8 1499 aa18.42■□□□□ 0.54
TUFT1-202ENST00000368848 ITGAEP38570 1179 aa18.36■□□□□ 0.53
TUFT1-202ENST00000368848 KCNH8Q96L42 1107 aa18.36■□□□□ 0.53
TUFT1-202ENST00000368848 DHX57Q6P158 1386 aaKnown RBP18.35■□□□□ 0.53
TUFT1-202ENST00000368848 KANK4Q5T7N3 995 aaPredicted RBP18.34■□□□□ 0.53
TUFT1-202ENST00000368848 BCANQ96GW7 911 aa18.31■□□□□ 0.52
TUFT1-202ENST00000368848 KIF21BO75037 1637 aa18.31■□□□□ 0.52
TUFT1-202ENST00000368848 TSHZ2Q9NRE2 1034 aa18.28■□□□□ 0.52
TUFT1-202ENST00000368848 ATAD2BQ9ULI0 1458 aa18.26■□□□□ 0.51
TUFT1-202ENST00000368848 BAZ1BQ9UIG0 1483 aaKnown RBP18.18■□□□□ 0.5
TUFT1-202ENST00000368848 ARAP1Q96P48 1450 aa18.14■□□□□ 0.49
TUFT1-202ENST00000368848 CLSPNQ9HAW4 1339 aa18.13■□□□□ 0.49
TUFT1-202ENST00000368848 HIRIP3Q9BW71 556 aaPredicted RBP18.12■□□□□ 0.49
TUFT1-202ENST00000368848 FKBP8Q14318 412 aa18.1■□□□□ 0.49
TUFT1-202ENST00000368848 DDX10Q13206 875 aaKnown RBP18.09■□□□□ 0.49
TUFT1-202ENST00000368848 ANP32EQ9BTT0 268 aa18.09■□□□□ 0.49
TUFT1-202ENST00000368848 SIN3AQ96ST3 1273 aa18.04■□□□□ 0.48
TUFT1-202ENST00000368848 CCNB3Q8WWL7 1395 aa18.03■□□□□ 0.48
TUFT1-202ENST00000368848 TRIM52Q96A61 297 aa18.01■□□□□ 0.47
TUFT1-202ENST00000368848 RAB3GAP2Q9H2M9 1393 aa18.01■□□□□ 0.47
TUFT1-202ENST00000368848 RRBP1Q9P2E9 1410 aaKnown RBP18■□□□□ 0.47
TUFT1-202ENST00000368848 PRXQ9BXM0 1461 aa17.99■□□□□ 0.47
TUFT1-202ENST00000368848 TOP2BQ02880 1626 aa17.99■□□□□ 0.47
TUFT1-202ENST00000368848 NCAPD3P42695 1498 aa17.94■□□□□ 0.46
TUFT1-202ENST00000368848 FAM50AQ14320 339 aaKnown RBP17.94■□□□□ 0.46
TUFT1-202ENST00000368848 MAPKBP1O60336 1514 aa17.93■□□□□ 0.46
TUFT1-202ENST00000368848 ATP1B4Q9UN42 357 aaPredicted RBP17.93■□□□□ 0.46
TUFT1-202ENST00000368848 HMGXB3Q12766 1538 aa17.92■□□□□ 0.46
TUFT1-202ENST00000368848 WDR97A6NE52 1622 aa17.91■□□□□ 0.46
TUFT1-202ENST00000368848 ARHGAP35Q9NRY4 1499 aa17.91■□□□□ 0.46
TUFT1-202ENST00000368848 ERICH3Q5RHP9 1530 aa17.91■□□□□ 0.46
TUFT1-202ENST00000368848 BIVM-ERCC5R4GMW8 1640 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms