RNA–Protein interactions for RNA: ENST00000552882.5

PMEL-218, Transcript of premelanosome protein, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PMEL, Length 2,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMEL-218ENST00000552882 NISCHQ9Y2I1 1504 aa27.33■■□□□ 1.97
PMEL-218ENST00000552882 CCDC180Q9P1Z9 1646 aa23.56■■□□□ 1.36
PMEL-218ENST00000552882 ZCCHC6Q5VYS8 1495 aaKnown RBP22.97■■□□□ 1.27
PMEL-218ENST00000552882 DCAF8L2P0C7V8 631 aa22.92■■□□□ 1.26
PMEL-218ENST00000552882 SHROOM4Q9ULL8 1493 aa22.8■■□□□ 1.24
PMEL-218ENST00000552882 ABCC9O60706 1549 aa22.57■■□□□ 1.2
PMEL-218ENST00000552882 DCAF1Q9Y4B6 1507 aa22.39■■□□□ 1.17
PMEL-218ENST00000552882 SCRIBQ14160 1630 aa22.02■■□□□ 1.12
PMEL-218ENST00000552882 MYO15BQ96JP2 1530 aa22.02■■□□□ 1.12
PMEL-218ENST00000552882 NACADO15069 1562 aa21.97■■□□□ 1.11
PMEL-218ENST00000552882 SUPT5HO00267 1087 aaKnown RBP21.96■■□□□ 1.11
PMEL-218ENST00000552882 RB1CC1Q8TDY2 1594 aa21.8■■□□□ 1.08
PMEL-218ENST00000552882 UNC13AQ9UPW8 1703 aa21.49■■□□□ 1.03
PMEL-218ENST00000552882 PABPN1Q86U42 306 aaKnown RBP eCLIP21.44■■□□□ 1.02
PMEL-218ENST00000552882 CECR2Q9BXF3 1484 aa21.42■■□□□ 1.02
PMEL-218ENST00000552882 RSF1Q96T23 1441 aaPredicted RBP21.35■■□□□ 1.01
PMEL-218ENST00000552882 BICRAQ9NZM4 1560 aa21.28■■□□□ 1
PMEL-218ENST00000552882 MROH2BQ7Z745 1585 aa21.25■□□□□ 0.99
PMEL-218ENST00000552882 WIZO95785 1651 aa21.09■□□□□ 0.97
PMEL-218ENST00000552882 BAZ1AQ9NRL2 1556 aaPredicted RBP21.03■□□□□ 0.96
PMEL-218ENST00000552882 SMARCA4P51532 1647 aa20.98■□□□□ 0.95
PMEL-218ENST00000552882 CHIC1Q5VXU3 224 aa20.96■□□□□ 0.95
PMEL-218ENST00000552882 TOP2AP11388 1531 aaKnown RBP20.71■□□□□ 0.91
PMEL-218ENST00000552882 ATAD2BQ9ULI0 1458 aa20.64■□□□□ 0.89
PMEL-218ENST00000552882 CCDC88BA6NC98 1476 aa20.63■□□□□ 0.89
PMEL-218ENST00000552882 EIF4G1Q04637 1599 aaKnown RBP20.6■□□□□ 0.89
PMEL-218ENST00000552882 PEG3Q9GZU2 1588 aa20.59■□□□□ 0.89
PMEL-218ENST00000552882 SMARCA2P51531 1590 aa20.59■□□□□ 0.89
PMEL-218ENST00000552882 BAZ1BQ9UIG0 1483 aaKnown RBP20.52■□□□□ 0.88
PMEL-218ENST00000552882 TRIM41Q8WV44 630 aa20.47■□□□□ 0.87
PMEL-218ENST00000552882 NCAPD3P42695 1498 aa20.35■□□□□ 0.85
PMEL-218ENST00000552882 LOC105371045A0A1W2PR82 267 aa20.35■□□□□ 0.85
PMEL-218ENST00000552882 ABCC8Q09428 1581 aa20.35■□□□□ 0.85
PMEL-218ENST00000552882 FAM9AQ8IZU1 332 aaPredicted RBP20.34■□□□□ 0.85
PMEL-218ENST00000552882 CC2D2AQ9P2K1 1620 aa20.3■□□□□ 0.84
PMEL-218ENST00000552882 HMGXB3Q12766 1538 aa20.27■□□□□ 0.84
PMEL-218ENST00000552882 EHMT2Q96KQ7 1210 aa20.23■□□□□ 0.83
PMEL-218ENST00000552882 DNAJC5BQ9UF47 199 aa20.13■□□□□ 0.81
PMEL-218ENST00000552882 WRNQ14191 1432 aaPredicted RBP eCLIP20.06■□□□□ 0.8
PMEL-218ENST00000552882 SYNJ1O43426 1573 aa20.02■□□□□ 0.8
PMEL-218ENST00000552882 SOGA1O94964 1423 aa20■□□□□ 0.79
PMEL-218ENST00000552882 CFTRP13569 1480 aa19.98■□□□□ 0.79
PMEL-218ENST00000552882 RUSC2Q8N2Y8 1516 aa19.97■□□□□ 0.79
PMEL-218ENST00000552882 CADPSQ9ULU8 1353 aa19.91■□□□□ 0.78
PMEL-218ENST00000552882 NESP48681 1621 aa19.89■□□□□ 0.78
PMEL-218ENST00000552882 CUX1P39880 1505 aa19.83■□□□□ 0.76
PMEL-218ENST00000552882 TOP2BQ02880 1626 aa19.8■□□□□ 0.76
PMEL-218ENST00000552882 CSRNP3Q8WYN3 585 aa19.76■□□□□ 0.75
PMEL-218ENST00000552882 BIVM-ERCC5R4GMW8 1640 aa19.74■□□□□ 0.75
PMEL-218ENST00000552882 PRDM2Q13029 1718 aa19.74■□□□□ 0.75
PMEL-218ENST00000552882 FANCD2Q9BXW9 1451 aa19.73■□□□□ 0.75
PMEL-218ENST00000552882 EEA1Q15075 1411 aa19.64■□□□□ 0.74
PMEL-218ENST00000552882 UBTFP17480 764 aaKnown RBP19.62■□□□□ 0.73
PMEL-218ENST00000552882 LAMC3Q9Y6N6 1575 aa19.59■□□□□ 0.73
PMEL-218ENST00000552882 FGD5Q6ZNL6 1462 aa19.58■□□□□ 0.73
PMEL-218ENST00000552882 CEP164Q9UPV0 1460 aa19.54■□□□□ 0.72
PMEL-218ENST00000552882 RAPGEF2Q9Y4G8 1499 aa19.54■□□□□ 0.72
PMEL-218ENST00000552882 GOLGA3Q08378 1498 aa19.52■□□□□ 0.72
PMEL-218ENST00000552882 TOPBP1Q92547 1522 aa19.52■□□□□ 0.71
PMEL-218ENST00000552882 RANGAP1P46060 587 aaPredicted RBP19.52■□□□□ 0.71
PMEL-218ENST00000552882 PPARGC1BQ86YN6 1023 aaKnown RBP19.52■□□□□ 0.71
PMEL-218ENST00000552882 URB2Q14146 1524 aaKnown RBP19.51■□□□□ 0.71
PMEL-218ENST00000552882 RAD54L2Q9Y4B4 1467 aa19.51■□□□□ 0.71
PMEL-218ENST00000552882 KIF21AQ7Z4S6 1674 aa19.51■□□□□ 0.71
PMEL-218ENST00000552882 PCGF6Q9BYE7 350 aa19.51■□□□□ 0.71
PMEL-218ENST00000552882 CUX2O14529 1486 aa19.5■□□□□ 0.71
PMEL-218ENST00000552882 CEP162Q5TB80 1403 aa19.5■□□□□ 0.71
PMEL-218ENST00000552882 PDS5BQ9NTI5 1447 aa19.49■□□□□ 0.71
PMEL-218ENST00000552882 TNIKQ9UKE5 1360 aa19.49■□□□□ 0.71
PMEL-218ENST00000552882 KIF27Q86VH2 1401 aa19.48■□□□□ 0.71
PMEL-218ENST00000552882 DNMBPQ6XZF7 1577 aa19.48■□□□□ 0.71
PMEL-218ENST00000552882 POLA1P09884 1462 aaPredicted RBP19.46■□□□□ 0.71
PMEL-218ENST00000552882 KIF21BO75037 1637 aa19.46■□□□□ 0.71
PMEL-218ENST00000552882 PRXQ9BXM0 1461 aa19.4■□□□□ 0.7
PMEL-218ENST00000552882 IGF1RP08069 1367 aa19.38■□□□□ 0.69
PMEL-218ENST00000552882 TTBK1Q5TCY1 1321 aaPredicted RBP19.35■□□□□ 0.69
PMEL-218ENST00000552882 TDRD9Q8NDG6 1382 aaKnown RBP19.33■□□□□ 0.68
PMEL-218ENST00000552882 ABCA10Q8WWZ4 1543 aa19.31■□□□□ 0.68
PMEL-218ENST00000552882 CLIP1P30622 1438 aa19.29■□□□□ 0.68
PMEL-218ENST00000552882 CARMIL1Q5VZK9 1371 aa19.28■□□□□ 0.68
PMEL-218ENST00000552882 ERICH3Q5RHP9 1530 aa19.28■□□□□ 0.68
PMEL-218ENST00000552882 TRIM26Q12899 539 aaPredicted RBP19.25■□□□□ 0.67
PMEL-218ENST00000552882 MRC2Q9UBG0 1479 aa19.25■□□□□ 0.67
PMEL-218ENST00000552882 ERCC6Q03468 1493 aa19.24■□□□□ 0.67
PMEL-218ENST00000552882 WDR97A6NE52 1622 aa19.21■□□□□ 0.67
PMEL-218ENST00000552882 TARBP1Q13395 1621 aaKnown RBP19.18■□□□□ 0.66
PMEL-218ENST00000552882 AQRO60306 1485 aaKnown RBP eCLIP19.17■□□□□ 0.66
PMEL-218ENST00000552882 GAPVD1Q14C86 1478 aa19.16■□□□□ 0.66
PMEL-218ENST00000552882 ABCA5Q8WWZ7 1642 aa19.14■□□□□ 0.66
PMEL-218ENST00000552882 ZNF608Q9ULD9 1512 aaPredicted RBP19.13■□□□□ 0.65
PMEL-218ENST00000552882 WDR62O43379 1518 aa19.12■□□□□ 0.65
PMEL-218ENST00000552882 ARAP1Q96P48 1450 aa19.1■□□□□ 0.65
PMEL-218ENST00000552882 VPS8Q8N3P4 1428 aa19.09■□□□□ 0.65
PMEL-218ENST00000552882 THOC2Q8NI27 1593 aaKnown RBP19.08■□□□□ 0.65
PMEL-218ENST00000552882 P3H3Q8IVL6 736 aa19.08■□□□□ 0.64
PMEL-218ENST00000552882 ARHGAP35Q9NRY4 1499 aa19.07■□□□□ 0.64
PMEL-218ENST00000552882 HRCP23327 699 aa19.06■□□□□ 0.64
PMEL-218ENST00000552882 CUL7Q14999 1698 aa19.03■□□□□ 0.64
PMEL-218ENST00000552882 IFT140Q96RY7 1462 aa19.01■□□□□ 0.63
PMEL-218ENST00000552882 PBRM1Q86U86 1689 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms