RNA–Protein interactions for RNA: ENST00000544914.5

HKR1-204, Transcript of HKR1, GLI-Kruppel zinc finger family member, humanhuman

TSL 2 BASIC

Gene HKR1, Length 2,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HKR1-204ENST00000544914 NISCHQ9Y2I1 1504 aa25.75■■□□□ 1.71
HKR1-204ENST00000544914 SHROOM4Q9ULL8 1493 aa22.2■■□□□ 1.14
HKR1-204ENST00000544914 ZCCHC6Q5VYS8 1495 aaKnown RBP21.75■■□□□ 1.07
HKR1-204ENST00000544914 SUPT5HO00267 1087 aaKnown RBP21.75■■□□□ 1.07
HKR1-204ENST00000544914 CCDC180Q9P1Z9 1646 aa21.75■■□□□ 1.07
HKR1-204ENST00000544914 DCAF8L2P0C7V8 631 aa21.65■■□□□ 1.06
HKR1-204ENST00000544914 CHIC1Q5VXU3 224 aa21.04■□□□□ 0.96
HKR1-204ENST00000544914 DCAF1Q9Y4B6 1507 aa20.99■□□□□ 0.95
HKR1-204ENST00000544914 MYO15BQ96JP2 1530 aa20.98■□□□□ 0.95
HKR1-204ENST00000544914 SCRIBQ14160 1630 aa20.6■□□□□ 0.89
HKR1-204ENST00000544914 LOC105371045A0A1W2PR82 267 aa20.54■□□□□ 0.88
HKR1-204ENST00000544914 ABCC9O60706 1549 aa20.49■□□□□ 0.87
HKR1-204ENST00000544914 PCGF6Q9BYE7 350 aa20.48■□□□□ 0.87
HKR1-204ENST00000544914 HRCP23327 699 aa20.44■□□□□ 0.86
HKR1-204ENST00000544914 RSF1Q96T23 1441 aaPredicted RBP20.44■□□□□ 0.86
HKR1-204ENST00000544914 PPARGC1BQ86YN6 1023 aaKnown RBP20.25■□□□□ 0.83
HKR1-204ENST00000544914 CECR2Q9BXF3 1484 aa20.22■□□□□ 0.83
HKR1-204ENST00000544914 RB1CC1Q8TDY2 1594 aa20.22■□□□□ 0.83
HKR1-204ENST00000544914 NACADO15069 1562 aa20.17■□□□□ 0.82
HKR1-204ENST00000544914 TRIM41Q8WV44 630 aa20.16■□□□□ 0.82
HKR1-204ENST00000544914 FAM9AQ8IZU1 332 aaPredicted RBP20.14■□□□□ 0.81
HKR1-204ENST00000544914 MROH2BQ7Z745 1585 aa20.1■□□□□ 0.81
HKR1-204ENST00000544914 EHMT2Q96KQ7 1210 aa20.07■□□□□ 0.8
HKR1-204ENST00000544914 WIZO95785 1651 aa19.98■□□□□ 0.79
HKR1-204ENST00000544914 TRIM26Q12899 539 aaPredicted RBP19.92■□□□□ 0.78
HKR1-204ENST00000544914 BAZ1AQ9NRL2 1556 aaPredicted RBP19.73■□□□□ 0.75
HKR1-204ENST00000544914 PABPN1Q86U42 306 aaKnown RBP eCLIP19.66■□□□□ 0.74
HKR1-204ENST00000544914 UNC13AQ9UPW8 1703 aa19.63■□□□□ 0.73
HKR1-204ENST00000544914 SMARCA4P51532 1647 aa19.6■□□□□ 0.73
HKR1-204ENST00000544914 EIF4G1Q04637 1599 aaKnown RBP19.6■□□□□ 0.73
HKR1-204ENST00000544914 CCDC88BA6NC98 1476 aa19.58■□□□□ 0.73
HKR1-204ENST00000544914 ABCC8Q09428 1581 aa19.58■□□□□ 0.72
HKR1-204ENST00000544914 TOP2AP11388 1531 aaKnown RBP19.56■□□□□ 0.72
HKR1-204ENST00000544914 SMARCA2P51531 1590 aa19.5■□□□□ 0.71
HKR1-204ENST00000544914 BICRAQ9NZM4 1560 aa19.42■□□□□ 0.7
HKR1-204ENST00000544914 SOGA1O94964 1423 aa19.41■□□□□ 0.7
HKR1-204ENST00000544914 TTBK1Q5TCY1 1321 aaPredicted RBP19.39■□□□□ 0.69
HKR1-204ENST00000544914 ZEB1P37275 1124 aaPredicted RBP19.38■□□□□ 0.69
HKR1-204ENST00000544914 RUSC2Q8N2Y8 1516 aa19.34■□□□□ 0.69
HKR1-204ENST00000544914 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.27■□□□□ 0.68
HKR1-204ENST00000544914 CSRNP3Q8WYN3 585 aa19.26■□□□□ 0.67
HKR1-204ENST00000544914 UBTFP17480 764 aaKnown RBP19.24■□□□□ 0.67
HKR1-204ENST00000544914 CEP162Q5TB80 1403 aa19.23■□□□□ 0.67
HKR1-204ENST00000544914 WRNQ14191 1432 aaPredicted RBP eCLIP19.18■□□□□ 0.66
HKR1-204ENST00000544914 TNIKQ9UKE5 1360 aa19.16■□□□□ 0.66
HKR1-204ENST00000544914 ATAD2BQ9ULI0 1458 aa19.15■□□□□ 0.66
HKR1-204ENST00000544914 PEG3Q9GZU2 1588 aa19.15■□□□□ 0.66
HKR1-204ENST00000544914 CCER1Q8TC90 406 aaPredicted RBP19.14■□□□□ 0.65
HKR1-204ENST00000544914 SCAF1Q9H7N4 1312 aaKnown RBP19.09■□□□□ 0.65
HKR1-204ENST00000544914 SYNJ1O43426 1573 aa19.09■□□□□ 0.65
HKR1-204ENST00000544914 BAZ1BQ9UIG0 1483 aaKnown RBP19.09■□□□□ 0.65
HKR1-204ENST00000544914 EEA1Q15075 1411 aa19.08■□□□□ 0.65
HKR1-204ENST00000544914 GOLGA3Q08378 1498 aa19.03■□□□□ 0.64
HKR1-204ENST00000544914 RANGAP1P46060 587 aaPredicted RBP19.01■□□□□ 0.63
HKR1-204ENST00000544914 CEP164Q9UPV0 1460 aa18.92■□□□□ 0.62
HKR1-204ENST00000544914 RAPGEF2Q9Y4G8 1499 aa18.9■□□□□ 0.62
HKR1-204ENST00000544914 CLIP1P30622 1438 aa18.88■□□□□ 0.61
HKR1-204ENST00000544914 HNRNPUL2Q1KMD3 747 aaKnown RBP18.85■□□□□ 0.61
HKR1-204ENST00000544914 KIF21BO75037 1637 aa18.85■□□□□ 0.61
HKR1-204ENST00000544914 NEUROD1Q13562 356 aa18.81■□□□□ 0.6
HKR1-204ENST00000544914 DIEXFQ68CQ4 756 aaKnown RBP18.81■□□□□ 0.6
HKR1-204ENST00000544914 TOP2BQ02880 1626 aa18.78■□□□□ 0.6
HKR1-204ENST00000544914 ACIN1Q9UKV3 1341 aaKnown RBP18.76■□□□□ 0.59
HKR1-204ENST00000544914 VPS8Q8N3P4 1428 aa18.75■□□□□ 0.59
HKR1-204ENST00000544914 NCAPD3P42695 1498 aa18.73■□□□□ 0.59
HKR1-204ENST00000544914 APLP2Q06481 763 aa18.72■□□□□ 0.59
HKR1-204ENST00000544914 PELP1Q8IZL8 1130 aaKnown RBP18.71■□□□□ 0.59
HKR1-204ENST00000544914 CUX1P39880 1505 aa18.68■□□□□ 0.58
HKR1-204ENST00000544914 BIVM-ERCC5R4GMW8 1640 aa18.68■□□□□ 0.58
HKR1-204ENST00000544914 HMGXB3Q12766 1538 aa18.66■□□□□ 0.58
HKR1-204ENST00000544914 GTF3C3Q9Y5Q9 886 aa18.66■□□□□ 0.58
HKR1-204ENST00000544914 PRXQ9BXM0 1461 aa18.64■□□□□ 0.57
HKR1-204ENST00000544914 CFTRP13569 1480 aa18.6■□□□□ 0.57
HKR1-204ENST00000544914 CENPBP07199 599 aaPredicted RBP18.6■□□□□ 0.57
HKR1-204ENST00000544914 KANK4Q5T7N3 995 aaPredicted RBP18.6■□□□□ 0.57
HKR1-204ENST00000544914 YTHDC1Q96MU7 727 aaKnown RBP18.6■□□□□ 0.57
HKR1-204ENST00000544914 ARAP1Q96P48 1450 aa18.57■□□□□ 0.56
HKR1-204ENST00000544914 ZNF316A6NFI3 1004 aaPredicted RBP18.56■□□□□ 0.56
HKR1-204ENST00000544914 KIF27Q86VH2 1401 aa18.56■□□□□ 0.56
HKR1-204ENST00000544914 ERICH3Q5RHP9 1530 aa18.54■□□□□ 0.56
HKR1-204ENST00000544914 CUX2O14529 1486 aa18.44■□□□□ 0.54
HKR1-204ENST00000544914 ARHGAP35Q9NRY4 1499 aa18.43■□□□□ 0.54
HKR1-204ENST00000544914 IGF1RP08069 1367 aa18.43■□□□□ 0.54
HKR1-204ENST00000544914 CADPSQ9ULU8 1353 aa18.43■□□□□ 0.54
HKR1-204ENST00000544914 MIER1Q8N108 512 aa18.41■□□□□ 0.54
HKR1-204ENST00000544914 ITGAEP38570 1179 aa18.4■□□□□ 0.54
HKR1-204ENST00000544914 FGD5Q6ZNL6 1462 aa18.36■□□□□ 0.53
HKR1-204ENST00000544914 DHX57Q6P158 1386 aaKnown RBP18.36■□□□□ 0.53
HKR1-204ENST00000544914 CARMIL1Q5VZK9 1371 aa18.34■□□□□ 0.53
HKR1-204ENST00000544914 P3H3Q8IVL6 736 aa18.33■□□□□ 0.53
HKR1-204ENST00000544914 CC2D2AQ9P2K1 1620 aa18.32■□□□□ 0.52
HKR1-204ENST00000544914 PRDM2Q13029 1718 aa18.3■□□□□ 0.52
HKR1-204ENST00000544914 RRBP1Q9P2E9 1410 aaKnown RBP18.3■□□□□ 0.52
HKR1-204ENST00000544914 CCNB3Q8WWL7 1395 aa18.27■□□□□ 0.52
HKR1-204ENST00000544914 FANCD2Q9BXW9 1451 aa18.25■□□□□ 0.51
HKR1-204ENST00000544914 RAD54L2Q9Y4B4 1467 aa18.25■□□□□ 0.51
HKR1-204ENST00000544914 ATP1B4Q9UN42 357 aaPredicted RBP18.25■□□□□ 0.51
HKR1-204ENST00000544914 NESP48681 1621 aa18.24■□□□□ 0.51
HKR1-204ENST00000544914 CLSPNQ9HAW4 1339 aa18.18■□□□□ 0.5
HKR1-204ENST00000544914 DNAJC5BQ9UF47 199 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms