RNA–Protein interactions for RNA: ENST00000624297.2

PRAMEF18-202, Transcript of PRAME family member 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF18, Length 2,067 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF18-202ENST00000624297 NISCHQ9Y2I1 1504 aa26.87■■□□□ 1.89
PRAMEF18-202ENST00000624297 CCDC180Q9P1Z9 1646 aa23.18■■□□□ 1.3
PRAMEF18-202ENST00000624297 ZCCHC6Q5VYS8 1495 aaKnown RBP22.67■■□□□ 1.22
PRAMEF18-202ENST00000624297 SHROOM4Q9ULL8 1493 aa22.41■■□□□ 1.18
PRAMEF18-202ENST00000624297 DCAF8L2P0C7V8 631 aa22.13■■□□□ 1.13
PRAMEF18-202ENST00000624297 DCAF1Q9Y4B6 1507 aa22.11■■□□□ 1.13
PRAMEF18-202ENST00000624297 SUPT5HO00267 1087 aaKnown RBP21.71■■□□□ 1.07
PRAMEF18-202ENST00000624297 ABCC9O60706 1549 aa21.66■■□□□ 1.06
PRAMEF18-202ENST00000624297 MYO15BQ96JP2 1530 aa21.64■■□□□ 1.05
PRAMEF18-202ENST00000624297 SCRIBQ14160 1630 aa21.53■■□□□ 1.04
PRAMEF18-202ENST00000624297 NACADO15069 1562 aa21.45■■□□□ 1.02
PRAMEF18-202ENST00000624297 RB1CC1Q8TDY2 1594 aa21.19■□□□□ 0.98
PRAMEF18-202ENST00000624297 RSF1Q96T23 1441 aaPredicted RBP21.04■□□□□ 0.96
PRAMEF18-202ENST00000624297 CHIC1Q5VXU3 224 aa20.97■□□□□ 0.95
PRAMEF18-202ENST00000624297 UNC13AQ9UPW8 1703 aa20.95■□□□□ 0.94
PRAMEF18-202ENST00000624297 CECR2Q9BXF3 1484 aa20.94■□□□□ 0.94
PRAMEF18-202ENST00000624297 MROH2BQ7Z745 1585 aa20.85■□□□□ 0.93
PRAMEF18-202ENST00000624297 WIZO95785 1651 aa20.74■□□□□ 0.91
PRAMEF18-202ENST00000624297 BAZ1AQ9NRL2 1556 aaPredicted RBP20.68■□□□□ 0.9
PRAMEF18-202ENST00000624297 BICRAQ9NZM4 1560 aa20.65■□□□□ 0.9
PRAMEF18-202ENST00000624297 SMARCA4P51532 1647 aa20.6■□□□□ 0.89
PRAMEF18-202ENST00000624297 PABPN1Q86U42 306 aaKnown RBP eCLIP20.53■□□□□ 0.88
PRAMEF18-202ENST00000624297 TOP2AP11388 1531 aaKnown RBP20.44■□□□□ 0.86
PRAMEF18-202ENST00000624297 EIF4G1Q04637 1599 aaKnown RBP20.36■□□□□ 0.85
PRAMEF18-202ENST00000624297 SMARCA2P51531 1590 aa20.3■□□□□ 0.84
PRAMEF18-202ENST00000624297 TRIM41Q8WV44 630 aa20.29■□□□□ 0.84
PRAMEF18-202ENST00000624297 LOC105371045A0A1W2PR82 267 aa20.26■□□□□ 0.83
PRAMEF18-202ENST00000624297 CCDC88BA6NC98 1476 aa20.26■□□□□ 0.83
PRAMEF18-202ENST00000624297 PEG3Q9GZU2 1588 aa20.24■□□□□ 0.83
PRAMEF18-202ENST00000624297 ATAD2BQ9ULI0 1458 aa20.11■□□□□ 0.81
PRAMEF18-202ENST00000624297 ABCC8Q09428 1581 aa20.08■□□□□ 0.81
PRAMEF18-202ENST00000624297 FAM9AQ8IZU1 332 aaPredicted RBP20.07■□□□□ 0.8
PRAMEF18-202ENST00000624297 BAZ1BQ9UIG0 1483 aaKnown RBP20.03■□□□□ 0.8
PRAMEF18-202ENST00000624297 EHMT2Q96KQ7 1210 aa19.87■□□□□ 0.77
PRAMEF18-202ENST00000624297 HMGXB3Q12766 1538 aa19.84■□□□□ 0.77
PRAMEF18-202ENST00000624297 NCAPD3P42695 1498 aa19.8■□□□□ 0.76
PRAMEF18-202ENST00000624297 PCGF6Q9BYE7 350 aa19.79■□□□□ 0.76
PRAMEF18-202ENST00000624297 WRNQ14191 1432 aaPredicted RBP eCLIP19.77■□□□□ 0.76
PRAMEF18-202ENST00000624297 SYNJ1O43426 1573 aa19.76■□□□□ 0.75
PRAMEF18-202ENST00000624297 SOGA1O94964 1423 aa19.75■□□□□ 0.75
PRAMEF18-202ENST00000624297 RUSC2Q8N2Y8 1516 aa19.69■□□□□ 0.74
PRAMEF18-202ENST00000624297 EEA1Q15075 1411 aa19.62■□□□□ 0.73
PRAMEF18-202ENST00000624297 CC2D2AQ9P2K1 1620 aa19.57■□□□□ 0.72
PRAMEF18-202ENST00000624297 TOP2BQ02880 1626 aa19.57■□□□□ 0.72
PRAMEF18-202ENST00000624297 TRIM26Q12899 539 aaPredicted RBP19.56■□□□□ 0.72
PRAMEF18-202ENST00000624297 BIVM-ERCC5R4GMW8 1640 aa19.55■□□□□ 0.72
PRAMEF18-202ENST00000624297 HRCP23327 699 aa19.54■□□□□ 0.72
PRAMEF18-202ENST00000624297 CSRNP3Q8WYN3 585 aa19.54■□□□□ 0.72
PRAMEF18-202ENST00000624297 CFTRP13569 1480 aa19.52■□□□□ 0.72
PRAMEF18-202ENST00000624297 PRDM2Q13029 1718 aa19.5■□□□□ 0.71
PRAMEF18-202ENST00000624297 CEP162Q5TB80 1403 aa19.47■□□□□ 0.71
PRAMEF18-202ENST00000624297 GOLGA3Q08378 1498 aa19.47■□□□□ 0.71
PRAMEF18-202ENST00000624297 CUX1P39880 1505 aa19.46■□□□□ 0.71
PRAMEF18-202ENST00000624297 TNIKQ9UKE5 1360 aa19.46■□□□□ 0.71
PRAMEF18-202ENST00000624297 KIF21BO75037 1637 aa19.45■□□□□ 0.7
PRAMEF18-202ENST00000624297 CEP164Q9UPV0 1460 aa19.4■□□□□ 0.7
PRAMEF18-202ENST00000624297 AEBP2Q6ZN18 517 aaPredicted RBP19.39■□□□□ 0.69
PRAMEF18-202ENST00000624297 UBTFP17480 764 aaKnown RBP19.37■□□□□ 0.69
PRAMEF18-202ENST00000624297 PPARGC1BQ86YN6 1023 aaKnown RBP19.36■□□□□ 0.69
PRAMEF18-202ENST00000624297 CADPSQ9ULU8 1353 aa19.34■□□□□ 0.69
PRAMEF18-202ENST00000624297 RAPGEF2Q9Y4G8 1499 aa19.32■□□□□ 0.68
PRAMEF18-202ENST00000624297 PRXQ9BXM0 1461 aa19.21■□□□□ 0.67
PRAMEF18-202ENST00000624297 ERICH3Q5RHP9 1530 aa19.2■□□□□ 0.66
PRAMEF18-202ENST00000624297 KIF27Q86VH2 1401 aa19.19■□□□□ 0.66
PRAMEF18-202ENST00000624297 FANCD2Q9BXW9 1451 aa19.19■□□□□ 0.66
PRAMEF18-202ENST00000624297 NESP48681 1621 aa19.19■□□□□ 0.66
PRAMEF18-202ENST00000624297 CLIP1P30622 1438 aa19.19■□□□□ 0.66
PRAMEF18-202ENST00000624297 FGD5Q6ZNL6 1462 aa19.16■□□□□ 0.66
PRAMEF18-202ENST00000624297 TTBK1Q5TCY1 1321 aaPredicted RBP19.13■□□□□ 0.65
PRAMEF18-202ENST00000624297 CUX2O14529 1486 aa19.11■□□□□ 0.65
PRAMEF18-202ENST00000624297 DNMBPQ6XZF7 1577 aa19.09■□□□□ 0.65
PRAMEF18-202ENST00000624297 LAMC3Q9Y6N6 1575 aa19.08■□□□□ 0.64
PRAMEF18-202ENST00000624297 DNAJC5BQ9UF47 199 aa19.07■□□□□ 0.64
PRAMEF18-202ENST00000624297 VPS8Q8N3P4 1428 aa19.07■□□□□ 0.64
PRAMEF18-202ENST00000624297 RANGAP1P46060 587 aaPredicted RBP19.07■□□□□ 0.64
PRAMEF18-202ENST00000624297 TOPBP1Q92547 1522 aa19.04■□□□□ 0.64
PRAMEF18-202ENST00000624297 IGF1RP08069 1367 aa19■□□□□ 0.63
PRAMEF18-202ENST00000624297 ARAP1Q96P48 1450 aa19■□□□□ 0.63
PRAMEF18-202ENST00000624297 POLA1P09884 1462 aaPredicted RBP18.99■□□□□ 0.63
PRAMEF18-202ENST00000624297 RAD54L2Q9Y4B4 1467 aa18.98■□□□□ 0.63
PRAMEF18-202ENST00000624297 URB2Q14146 1524 aaKnown RBP18.97■□□□□ 0.63
PRAMEF18-202ENST00000624297 KIF21AQ7Z4S6 1674 aa18.95■□□□□ 0.62
PRAMEF18-202ENST00000624297 ABCA10Q8WWZ4 1543 aa18.94■□□□□ 0.62
PRAMEF18-202ENST00000624297 WDR97A6NE52 1622 aa18.91■□□□□ 0.62
PRAMEF18-202ENST00000624297 ZEB1P37275 1124 aaPredicted RBP18.91■□□□□ 0.62
PRAMEF18-202ENST00000624297 CARMIL1Q5VZK9 1371 aa18.91■□□□□ 0.62
PRAMEF18-202ENST00000624297 ARHGAP35Q9NRY4 1499 aa18.89■□□□□ 0.61
PRAMEF18-202ENST00000624297 PDS5BQ9NTI5 1447 aa18.88■□□□□ 0.61
PRAMEF18-202ENST00000624297 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.85■□□□□ 0.61
PRAMEF18-202ENST00000624297 APLP2Q06481 763 aa18.81■□□□□ 0.6
PRAMEF18-202ENST00000624297 CUL7Q14999 1698 aa18.81■□□□□ 0.6
PRAMEF18-202ENST00000624297 ABCA5Q8WWZ7 1642 aa18.8■□□□□ 0.6
PRAMEF18-202ENST00000624297 CCER1Q8TC90 406 aaPredicted RBP18.77■□□□□ 0.59
PRAMEF18-202ENST00000624297 TARBP1Q13395 1621 aaKnown RBP18.74■□□□□ 0.59
PRAMEF18-202ENST00000624297 CTTNBP2Q8WZ74 1663 aa18.74■□□□□ 0.59
PRAMEF18-202ENST00000624297 TDRD9Q8NDG6 1382 aaKnown RBP18.73■□□□□ 0.59
PRAMEF18-202ENST00000624297 KANK4Q5T7N3 995 aaPredicted RBP18.72■□□□□ 0.59
PRAMEF18-202ENST00000624297 GAPVD1Q14C86 1478 aa18.7■□□□□ 0.58
PRAMEF18-202ENST00000624297 MRC2Q9UBG0 1479 aa18.67■□□□□ 0.58
PRAMEF18-202ENST00000624297 HNRNPUL2Q1KMD3 747 aaKnown RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms