RNA–Protein interactions for RNA: ENST00000336418.8

AP3S2-201, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP3S2, Length 5,891 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-201ENST00000336418 DCAF8L2P0C7V8 631 aa19.18■□□□□ 0.66
AP3S2-201ENST00000336418 SUPT5HO00267 1087 aaKnown RBP18.69■□□□□ 0.58
AP3S2-201ENST00000336418 PELP1Q8IZL8 1130 aaKnown RBP18.62■□□□□ 0.57
AP3S2-201ENST00000336418 EHMT2Q96KQ7 1210 aa18.56■□□□□ 0.56
AP3S2-201ENST00000336418 PCGF6Q9BYE7 350 aa18.2■□□□□ 0.5
AP3S2-201ENST00000336418 ERICH6Q7L0X2 663 aa18.18■□□□□ 0.5
AP3S2-201ENST00000336418 SHROOM4Q9ULL8 1493 aa18.16■□□□□ 0.5
AP3S2-201ENST00000336418 MYT1Q01538 1121 aa18.01■□□□□ 0.47
AP3S2-201ENST00000336418 TTBK1Q5TCY1 1321 aaPredicted RBP18.01■□□□□ 0.47
AP3S2-201ENST00000336418 CENPBP07199 599 aaPredicted RBP17.99■□□□□ 0.47
AP3S2-201ENST00000336418 YTHDC1Q96MU7 727 aaKnown RBP17.87■□□□□ 0.45
AP3S2-201ENST00000336418 CCER1Q8TC90 406 aaPredicted RBP17.76■□□□□ 0.43
AP3S2-201ENST00000336418 FAM9AQ8IZU1 332 aaPredicted RBP17.76■□□□□ 0.43
AP3S2-201ENST00000336418 APLP2Q06481 763 aa17.65■□□□□ 0.42
AP3S2-201ENST00000336418 NISCHQ9Y2I1 1504 aa17.62■□□□□ 0.41
AP3S2-201ENST00000336418 ZEB1P37275 1124 aaPredicted RBP17.6■□□□□ 0.41
AP3S2-201ENST00000336418 NEFLP07196 543 aa17.47■□□□□ 0.39
AP3S2-201ENST00000336418 RANGAP1P46060 587 aaPredicted RBP17.4■□□□□ 0.38
AP3S2-201ENST00000336418 PPARGC1BQ86YN6 1023 aaKnown RBP17.31■□□□□ 0.36
AP3S2-201ENST00000336418 HRCP23327 699 aa17.31■□□□□ 0.36
AP3S2-201ENST00000336418 TRIM41Q8WV44 630 aa17.06■□□□□ 0.32
AP3S2-201ENST00000336418 DAXXQ9UER7 740 aaPredicted RBP17.06■□□□□ 0.32
AP3S2-201ENST00000336418 ATP1B4Q9UN42 357 aaPredicted RBP17.06■□□□□ 0.32
AP3S2-201ENST00000336418 TRIM26Q12899 539 aaPredicted RBP17.03■□□□□ 0.32
AP3S2-201ENST00000336418 UBTFP17480 764 aaKnown RBP16.91■□□□□ 0.3
AP3S2-201ENST00000336418 RTL5Q5HYW3 569 aaPredicted RBP16.9■□□□□ 0.3
AP3S2-201ENST00000336418 GTF3C3Q9Y5Q9 886 aa16.9■□□□□ 0.3
AP3S2-201ENST00000336418 CNGB1Q14028 1251 aaPredicted RBP16.88■□□□□ 0.29
AP3S2-201ENST00000336418 BCANQ96GW7 911 aa16.86■□□□□ 0.29
AP3S2-201ENST00000336418 POLR3GLQ9BT43 218 aa16.81■□□□□ 0.28
AP3S2-201ENST00000336418 DIEXFQ68CQ4 756 aaKnown RBP16.81■□□□□ 0.28
AP3S2-201ENST00000336418 LOC105371045A0A1W2PR82 267 aa16.78■□□□□ 0.28
AP3S2-201ENST00000336418 ZNF316A6NFI3 1004 aaPredicted RBP16.73■□□□□ 0.27
AP3S2-201ENST00000336418 ITGAEP38570 1179 aa16.73■□□□□ 0.27
AP3S2-201ENST00000336418 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.72■□□□□ 0.27
AP3S2-201ENST00000336418 HNRNPUL2Q1KMD3 747 aaKnown RBP16.68■□□□□ 0.26
AP3S2-201ENST00000336418 CLSPNQ9HAW4 1339 aa16.55■□□□□ 0.24
AP3S2-201ENST00000336418 EIF5BO60841 1220 aaKnown RBP16.53■□□□□ 0.24
AP3S2-201ENST00000336418 ACIN1Q9UKV3 1341 aaKnown RBP16.48■□□□□ 0.23
AP3S2-201ENST00000336418 CDK11AQ9UQ88 783 aaPredicted RBP16.45■□□□□ 0.22
AP3S2-201ENST00000336418 CHIC1Q5VXU3 224 aa16.39■□□□□ 0.21
AP3S2-201ENST00000336418 NPM2Q86SE8 214 aaKnown RBP16.29■□□□□ 0.2
AP3S2-201ENST00000336418 SLC4A1APQ9BWU0 796 aaKnown RBP16.26■□□□□ 0.19
AP3S2-201ENST00000336418 NEUROD1Q13562 356 aa16.25■□□□□ 0.19
AP3S2-201ENST00000336418 SCAF1Q9H7N4 1312 aaKnown RBP16.22■□□□□ 0.19
AP3S2-201ENST00000336418 NBR1Q14596 966 aa16.2■□□□□ 0.18
AP3S2-201ENST00000336418 BCL11AQ9H165 835 aa16.19■□□□□ 0.18
AP3S2-201ENST00000336418 ANP32AP39687 249 aaKnown RBP16.18■□□□□ 0.18
AP3S2-201ENST00000336418 ANP32CO43423 234 aa16.16■□□□□ 0.18
AP3S2-201ENST00000336418 FKBP8Q14318 412 aa16.15■□□□□ 0.18
AP3S2-201ENST00000336418 MYT1LQ9UL68 1186 aa16.13■□□□□ 0.17
AP3S2-201ENST00000336418 GLIPR1L2Q4G1C9 344 aa16.09■□□□□ 0.17
AP3S2-201ENST00000336418 FAM50AQ14320 339 aaKnown RBP16.07■□□□□ 0.16
AP3S2-201ENST00000336418 ARXQ96QS3 562 aa16.05■□□□□ 0.16
AP3S2-201ENST00000336418 PABPN1Q86U42 306 aaKnown RBP eCLIP15.99■□□□□ 0.15
AP3S2-201ENST00000336418 TRIM52Q96A61 297 aa15.99■□□□□ 0.15
AP3S2-201ENST00000336418 ZNF326Q5BKZ1 582 aaKnown RBP15.98■□□□□ 0.15
AP3S2-201ENST00000336418 ABCC9O60706 1549 aa15.97■□□□□ 0.15
AP3S2-201ENST00000336418 CANXP27824 592 aaKnown RBP15.96■□□□□ 0.14
AP3S2-201ENST00000336418 ZBTB47Q9UFB7 747 aaPredicted RBP15.89■□□□□ 0.13
AP3S2-201ENST00000336418 RTN4Q9NQC3 1192 aaKnown RBP15.86■□□□□ 0.13
AP3S2-201ENST00000336418 ANP32BQ92688 251 aaKnown RBP15.86■□□□□ 0.13
AP3S2-201ENST00000336418 IRX6P78412 446 aaPredicted RBP15.85■□□□□ 0.13
AP3S2-201ENST00000336418 ANP32EQ9BTT0 268 aa15.84■□□□□ 0.13
AP3S2-201ENST00000336418 HNRNPUQ00839 825 aaKnown RBP eCLIP15.79■□□□□ 0.12
AP3S2-201ENST00000336418 HSP90AA1P07900 732 aaKnown RBP15.76■□□□□ 0.11
AP3S2-201ENST00000336418 FAM9BQ8IZU0 186 aa15.74■□□□□ 0.11
AP3S2-201ENST00000336418 SLC24A1O60721 1099 aa15.74■□□□□ 0.11
AP3S2-201ENST00000336418 SALL2Q9Y467 1007 aaPredicted RBP15.74■□□□□ 0.11
AP3S2-201ENST00000336418 MIER1Q8N108 512 aa15.72■□□□□ 0.11
AP3S2-201ENST00000336418 DDX10Q13206 875 aaKnown RBP15.72■□□□□ 0.11
AP3S2-201ENST00000336418 CCDC136Q96JN2 1154 aa15.69■□□□□ 0.1
AP3S2-201ENST00000336418 FBLN2P98095 1184 aa15.63■□□□□ 0.09
AP3S2-201ENST00000336418 UPF2Q9HAU5 1272 aaKnown RBP15.62■□□□□ 0.09
AP3S2-201ENST00000336418 NAP1L5Q96NT1 182 aaPredicted RBP15.56■□□□□ 0.08
AP3S2-201ENST00000336418 LAS1LQ9Y4W2 734 aaKnown RBP15.53■□□□□ 0.08
AP3S2-201ENST00000336418 HIRIP3Q9BW71 556 aaPredicted RBP15.53■□□□□ 0.08
AP3S2-201ENST00000336418 AMER1Q5JTC6 1135 aaPredicted RBP15.53■□□□□ 0.08
AP3S2-201ENST00000336418 SENP3-EIF4A1A0A087X0R7 540 aa15.52■□□□□ 0.07
AP3S2-201ENST00000336418 NEFMP07197 916 aa15.52■□□□□ 0.07
AP3S2-201ENST00000336418 TRIM44Q96DX7 344 aaPredicted RBP15.51■□□□□ 0.07
AP3S2-201ENST00000336418 ARID3CA6NKF2 412 aa15.48■□□□□ 0.07
AP3S2-201ENST00000336418 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.48■□□□□ 0.07
AP3S2-201ENST00000336418 P3H3Q8IVL6 736 aa15.46■□□□□ 0.07
AP3S2-201ENST00000336418 DEKP35659 375 aaKnown RBP15.45■□□□□ 0.06
AP3S2-201ENST00000336418 TNNT2P45379 298 aaPredicted RBP15.44■□□□□ 0.06
AP3S2-201ENST00000336418 MRS2Q9HD23 443 aa15.42■□□□□ 0.06
AP3S2-201ENST00000336418 ARID4BQ4LE39 1312 aaPredicted RBP15.42■□□□□ 0.06
AP3S2-201ENST00000336418 TONSLQ96HA7 1378 aa15.41■□□□□ 0.06
AP3S2-201ENST00000336418 TPRNQ4KMQ1 711 aa15.41■□□□□ 0.06
AP3S2-201ENST00000336418 DDRGK1Q96HY6 314 aa15.4■□□□□ 0.06
AP3S2-201ENST00000336418 SUPT16HQ9Y5B9 1047 aaKnown RBP15.39■□□□□ 0.05
AP3S2-201ENST00000336418 NCLP19338 710 aaKnown RBP15.39■□□□□ 0.05
AP3S2-201ENST00000336418 TMC1Q8TDI8 760 aa15.39■□□□□ 0.05
AP3S2-201ENST00000336418 NOP58Q9Y2X3 529 aaKnown RBP15.38■□□□□ 0.05
AP3S2-201ENST00000336418 DCAF1Q9Y4B6 1507 aa15.38■□□□□ 0.05
AP3S2-201ENST00000336418 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.37■□□□□ 0.05
AP3S2-201ENST00000336418 ERICH6BQ5W0A0 696 aa15.36■□□□□ 0.05
AP3S2-201ENST00000336418 DNTTIP2Q5QJE6 756 aaKnown RBP15.36■□□□□ 0.05
AP3S2-201ENST00000336418 CSRNP3Q8WYN3 585 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms