RNA–Protein interactions for RNA: ENST00000363013.1

RN7SKP90-201, Transcript of RNA, 7SK small nuclear pseudogene 90, humanhuman

BASIC

Gene RN7SKP90, Length 335 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP90-201ENST00000363013 NISCHQ9Y2I1 1504 aa27.72■■■□□ 2.03
RN7SKP90-201ENST00000363013 ABCC9O60706 1549 aa24.62■■□□□ 1.53
RN7SKP90-201ENST00000363013 CCDC180Q9P1Z9 1646 aa24.36■■□□□ 1.49
RN7SKP90-201ENST00000363013 DNAJC5BQ9UF47 199 aa23.56■■□□□ 1.36
RN7SKP90-201ENST00000363013 ZCCHC6Q5VYS8 1495 aaKnown RBP23.33■■□□□ 1.33
RN7SKP90-201ENST00000363013 RB1CC1Q8TDY2 1594 aa23.32■■□□□ 1.32
RN7SKP90-201ENST00000363013 NACADO15069 1562 aa23.06■■□□□ 1.28
RN7SKP90-201ENST00000363013 DCAF1Q9Y4B6 1507 aa22.98■■□□□ 1.27
RN7SKP90-201ENST00000363013 UNC13AQ9UPW8 1703 aa22.95■■□□□ 1.26
RN7SKP90-201ENST00000363013 BICRAQ9NZM4 1560 aa22.74■■□□□ 1.23
RN7SKP90-201ENST00000363013 PABPN1Q86U42 306 aaKnown RBP eCLIP22.73■■□□□ 1.23
RN7SKP90-201ENST00000363013 MYO15BQ96JP2 1530 aa22.67■■□□□ 1.22
RN7SKP90-201ENST00000363013 DCAF8L2P0C7V8 631 aa22.65■■□□□ 1.22
RN7SKP90-201ENST00000363013 SHROOM4Q9ULL8 1493 aa22.54■■□□□ 1.2
RN7SKP90-201ENST00000363013 CC2D2AQ9P2K1 1620 aa22.33■■□□□ 1.17
RN7SKP90-201ENST00000363013 AEBP2Q6ZN18 517 aaPredicted RBP22.3■■□□□ 1.16
RN7SKP90-201ENST00000363013 CECR2Q9BXF3 1484 aa22.28■■□□□ 1.16
RN7SKP90-201ENST00000363013 CHIC1Q5VXU3 224 aa22.24■■□□□ 1.15
RN7SKP90-201ENST00000363013 SCRIBQ14160 1630 aa22.18■■□□□ 1.14
RN7SKP90-201ENST00000363013 EIF4G1Q04637 1599 aaKnown RBP22.16■■□□□ 1.14
RN7SKP90-201ENST00000363013 DNAJC5Q9H3Z4 198 aa22.04■■□□□ 1.12
RN7SKP90-201ENST00000363013 SUPT5HO00267 1087 aaKnown RBP21.68■■□□□ 1.06
RN7SKP90-201ENST00000363013 CUX2O14529 1486 aa21.55■■□□□ 1.04
RN7SKP90-201ENST00000363013 RSF1Q96T23 1441 aaPredicted RBP21.51■■□□□ 1.03
RN7SKP90-201ENST00000363013 MROH2BQ7Z745 1585 aa21.4■■□□□ 1.02
RN7SKP90-201ENST00000363013 BAZ1AQ9NRL2 1556 aaPredicted RBP21.39■■□□□ 1.01
RN7SKP90-201ENST00000363013 SMARCA4P51532 1647 aa21.3■■□□□ 1
RN7SKP90-201ENST00000363013 NCAPD3P42695 1498 aa21.27■■□□□ 1
RN7SKP90-201ENST00000363013 ERCC6Q03468 1493 aa21.26■□□□□ 0.99
RN7SKP90-201ENST00000363013 WIZO95785 1651 aa21.23■□□□□ 0.99
RN7SKP90-201ENST00000363013 HMGXB3Q12766 1538 aa21.12■□□□□ 0.97
RN7SKP90-201ENST00000363013 ATAD2BQ9ULI0 1458 aa21.1■□□□□ 0.97
RN7SKP90-201ENST00000363013 THOC2Q8NI27 1593 aaKnown RBP21.08■□□□□ 0.97
RN7SKP90-201ENST00000363013 PEG3Q9GZU2 1588 aa21.07■□□□□ 0.96
RN7SKP90-201ENST00000363013 TOP2AP11388 1531 aaKnown RBP21.04■□□□□ 0.96
RN7SKP90-201ENST00000363013 SMARCA2P51531 1590 aa21.04■□□□□ 0.96
RN7SKP90-201ENST00000363013 NESP48681 1621 aa21.04■□□□□ 0.96
RN7SKP90-201ENST00000363013 LAMC3Q9Y6N6 1575 aa20.91■□□□□ 0.94
RN7SKP90-201ENST00000363013 KIF21AQ7Z4S6 1674 aa20.87■□□□□ 0.93
RN7SKP90-201ENST00000363013 BAZ1BQ9UIG0 1483 aaKnown RBP20.82■□□□□ 0.92
RN7SKP90-201ENST00000363013 CCDC88BA6NC98 1476 aa20.79■□□□□ 0.92
RN7SKP90-201ENST00000363013 PDS5BQ9NTI5 1447 aa20.7■□□□□ 0.9
RN7SKP90-201ENST00000363013 TRIM41Q8WV44 630 aa20.68■□□□□ 0.9
RN7SKP90-201ENST00000363013 WDR62O43379 1518 aa20.63■□□□□ 0.89
RN7SKP90-201ENST00000363013 MRC2Q9UBG0 1479 aa20.58■□□□□ 0.89
RN7SKP90-201ENST00000363013 CADPSQ9ULU8 1353 aa20.52■□□□□ 0.88
RN7SKP90-201ENST00000363013 CEP164Q9UPV0 1460 aa20.37■□□□□ 0.85
RN7SKP90-201ENST00000363013 ABCC8Q09428 1581 aa20.36■□□□□ 0.85
RN7SKP90-201ENST00000363013 OSCARQ8IYS5 282 aa20.31■□□□□ 0.84
RN7SKP90-201ENST00000363013 FANCD2Q9BXW9 1451 aa20.3■□□□□ 0.84
RN7SKP90-201ENST00000363013 CFTRP13569 1480 aa20.29■□□□□ 0.84
RN7SKP90-201ENST00000363013 RIMBP3CA6NJZ7 1639 aa20.27■□□□□ 0.84
RN7SKP90-201ENST00000363013 RIMBP3BA6NNM3 1639 aa20.27■□□□□ 0.84
RN7SKP90-201ENST00000363013 RIMBP3Q9UFD9 1639 aa20.27■□□□□ 0.84
RN7SKP90-201ENST00000363013 PRDM2Q13029 1718 aa20.24■□□□□ 0.83
RN7SKP90-201ENST00000363013 WRNQ14191 1432 aaPredicted RBP eCLIP20.22■□□□□ 0.834e-7■■■□□ 16.7
RN7SKP90-201ENST00000363013 URB2Q14146 1524 aaKnown RBP20.21■□□□□ 0.83
RN7SKP90-201ENST00000363013 SYNJ1O43426 1573 aa20.18■□□□□ 0.82
RN7SKP90-201ENST00000363013 ARHGEF11O15085 1522 aa20.12■□□□□ 0.81
RN7SKP90-201ENST00000363013 TOP2BQ02880 1626 aa20.1■□□□□ 0.81
RN7SKP90-201ENST00000363013 BIVM-ERCC5R4GMW8 1640 aa20.1■□□□□ 0.81
RN7SKP90-201ENST00000363013 CUX1P39880 1505 aa20.02■□□□□ 0.8
RN7SKP90-201ENST00000363013 LOC105371045A0A1W2PR82 267 aa20.02■□□□□ 0.8
RN7SKP90-201ENST00000363013 ZNF608Q9ULD9 1512 aaPredicted RBP20.01■□□□□ 0.79
RN7SKP90-201ENST00000363013 EEA1Q15075 1411 aa20.01■□□□□ 0.79
RN7SKP90-201ENST00000363013 IFT140Q96RY7 1462 aa20■□□□□ 0.79
RN7SKP90-201ENST00000363013 FAM9AQ8IZU1 332 aaPredicted RBP20■□□□□ 0.79
RN7SKP90-201ENST00000363013 SOGA1O94964 1423 aa19.99■□□□□ 0.79
RN7SKP90-201ENST00000363013 EIF4G3O43432 1585 aaKnown RBP19.95■□□□□ 0.78
RN7SKP90-201ENST00000363013 CHD1O14646 1710 aa19.93■□□□□ 0.78
RN7SKP90-201ENST00000363013 RUSC2Q8N2Y8 1516 aa19.92■□□□□ 0.78
RN7SKP90-201ENST00000363013 TOPBP1Q92547 1522 aa19.89■□□□□ 0.77
RN7SKP90-201ENST00000363013 ARAP1Q96P48 1450 aa19.89■□□□□ 0.77
RN7SKP90-201ENST00000363013 TARBP1Q13395 1621 aaKnown RBP19.84■□□□□ 0.77
RN7SKP90-201ENST00000363013 DNMBPQ6XZF7 1577 aa19.83■□□□□ 0.76
RN7SKP90-201ENST00000363013 CYB5RLQ6IPT4 315 aa19.82■□□□□ 0.76
RN7SKP90-201ENST00000363013 CSRNP3Q8WYN3 585 aa19.81■□□□□ 0.76
RN7SKP90-201ENST00000363013 KIF21BO75037 1637 aa19.77■□□□□ 0.76
RN7SKP90-201ENST00000363013 FGD5Q6ZNL6 1462 aa19.77■□□□□ 0.76
RN7SKP90-201ENST00000363013 GOLGA3Q08378 1498 aa19.73■□□□□ 0.75
RN7SKP90-201ENST00000363013 TRHP20396 242 aaPredicted RBP19.71■□□□□ 0.75
RN7SKP90-201ENST00000363013 AQRO60306 1485 aaKnown RBP eCLIP19.71■□□□□ 0.75
RN7SKP90-201ENST00000363013 KIF27Q86VH2 1401 aa19.7■□□□□ 0.74
RN7SKP90-201ENST00000363013 PHF23Q9BUL5 403 aaPredicted RBP19.7■□□□□ 0.74
RN7SKP90-201ENST00000363013 CLASP1Q7Z460 1538 aa19.69■□□□□ 0.74
RN7SKP90-201ENST00000363013 POLA1P09884 1462 aaPredicted RBP19.67■□□□□ 0.74
RN7SKP90-201ENST00000363013 TNIKQ9UKE5 1360 aa19.67■□□□□ 0.74
RN7SKP90-201ENST00000363013 EHMT2Q96KQ7 1210 aa19.66■□□□□ 0.74
RN7SKP90-201ENST00000363013 WDR97A6NE52 1622 aa19.65■□□□□ 0.74
RN7SKP90-201ENST00000363013 PRXQ9BXM0 1461 aa19.63■□□□□ 0.73
RN7SKP90-201ENST00000363013 ERICH3Q5RHP9 1530 aa19.62■□□□□ 0.73
RN7SKP90-201ENST00000363013 ABCA10Q8WWZ4 1543 aa19.62■□□□□ 0.73
RN7SKP90-201ENST00000363013 RAPGEF2Q9Y4G8 1499 aa19.59■□□□□ 0.73
RN7SKP90-201ENST00000363013 RAD54L2Q9Y4B4 1467 aa19.58■□□□□ 0.72
RN7SKP90-201ENST00000363013 CEP162Q5TB80 1403 aa19.56■□□□□ 0.72
RN7SKP90-201ENST00000363013 SNAPC4Q5SXM2 1469 aa19.53■□□□□ 0.72
RN7SKP90-201ENST00000363013 IGF1RP08069 1367 aa19.52■□□□□ 0.72
RN7SKP90-201ENST00000363013 UBTFP17480 764 aaKnown RBP19.51■□□□□ 0.71
RN7SKP90-201ENST00000363013 FBLN2P98095 1184 aa19.51■□□□□ 0.71
RN7SKP90-201ENST00000363013 MAGI1Q96QZ7 1491 aaPredicted RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms