RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 AEBP2Q6ZN18 517 aaPredicted RBP36.42■■■■□ 3.42
HMGB1P8-201ENST00000558211 CHIC1Q5VXU3 224 aa35.57■■■■□ 3.28
HMGB1P8-201ENST00000558211 PHF23Q9BUL5 403 aaPredicted RBP31.32■■■□□ 2.6
HMGB1P8-201ENST00000558211 SENP3Q9H4L4 574 aaPredicted RBP30.83■■■□□ 2.53
HMGB1P8-201ENST00000558211 PLPPR3Q6T4P5 718 aa28.85■■■□□ 2.21
HMGB1P8-201ENST00000558211 FOXD1Q16676 465 aa28.64■■■□□ 2.18
HMGB1P8-201ENST00000558211 NISCHQ9Y2I1 1504 aa28.37■■■□□ 2.13
HMGB1P8-201ENST00000558211 PPP6R1Q9UPN7 881 aa27.61■■■□□ 2.01
HMGB1P8-201ENST00000558211 ADRA2BP18089 450 aa27.54■■■□□ 2
HMGB1P8-201ENST00000558211 PIAS4Q8N2W9 510 aaPredicted RBP26.95■■□□□ 1.9
HMGB1P8-201ENST00000558211 MSH5O43196 834 aa26.36■■□□□ 1.81
HMGB1P8-201ENST00000558211 PPP4R3CPQ6ZMV5 832 aa25.43■■□□□ 1.66
HMGB1P8-201ENST00000558211 SCAF1Q9H7N4 1312 aaKnown RBP25.13■■□□□ 1.61
HMGB1P8-201ENST00000558211 CCDC180Q9P1Z9 1646 aa25.04■■□□□ 1.6
HMGB1P8-201ENST00000558211 MAPK8IP2Q13387 824 aaPredicted RBP24.99■■□□□ 1.59
HMGB1P8-201ENST00000558211 KCNA4P22459 653 aa24.89■■□□□ 1.58
HMGB1P8-201ENST00000558211 NCBP3Q53F19 620 aaKnown RBP24.72■■□□□ 1.55
HMGB1P8-201ENST00000558211 CNKSR2Q8WXI2 1034 aa24.72■■□□□ 1.55
HMGB1P8-201ENST00000558211 DMRT2Q9Y5R5 561 aa24.65■■□□□ 1.54
HMGB1P8-201ENST00000558211 NPM3O75607 178 aaKnown RBP24.43■■□□□ 1.5
HMGB1P8-201ENST00000558211 ABCC9O60706 1549 aa24.33■■□□□ 1.49
HMGB1P8-201ENST00000558211 RNF216Q9NWF9 866 aaPredicted RBP24.25■■□□□ 1.47
HMGB1P8-201ENST00000558211 HOXD11P31277 338 aaPredicted RBP24.18■■□□□ 1.46
HMGB1P8-201ENST00000558211 POTEDQ86YR6 584 aa23.98■■□□□ 1.43
HMGB1P8-201ENST00000558211 DNAJC5BQ9UF47 199 aa23.84■■□□□ 1.41
HMGB1P8-201ENST00000558211 DCAF8L2P0C7V8 631 aa23.79■■□□□ 1.4
HMGB1P8-201ENST00000558211 ZCCHC6Q5VYS8 1495 aaKnown RBP23.68■■□□□ 1.38
HMGB1P8-201ENST00000558211 SLC4A1APQ9BWU0 796 aaKnown RBP23.66■■□□□ 1.38
HMGB1P8-201ENST00000558211 NACADO15069 1562 aa23.48■■□□□ 1.35
HMGB1P8-201ENST00000558211 RB1CC1Q8TDY2 1594 aa23.45■■□□□ 1.34
HMGB1P8-201ENST00000558211 DCAF8L1A6NGE4 600 aa23.42■■□□□ 1.34
HMGB1P8-201ENST00000558211 DCAF1Q9Y4B6 1507 aa23.41■■□□□ 1.34
HMGB1P8-201ENST00000558211 MYO15BQ96JP2 1530 aa23.36■■□□□ 1.33
HMGB1P8-201ENST00000558211 SLC4A2P04920 1241 aa23.1■■□□□ 1.29
HMGB1P8-201ENST00000558211 SCRIBQ14160 1630 aa22.99■■□□□ 1.27
HMGB1P8-201ENST00000558211 UNC13AQ9UPW8 1703 aa22.97■■□□□ 1.27
HMGB1P8-201ENST00000558211 EHMT2Q96KQ7 1210 aa22.97■■□□□ 1.27
HMGB1P8-201ENST00000558211 ZBTB22O15209 634 aa22.96■■□□□ 1.27
HMGB1P8-201ENST00000558211 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.92■■□□□ 1.26
HMGB1P8-201ENST00000558211 FOXD4L1Q9NU39 408 aa22.88■■□□□ 1.25
HMGB1P8-201ENST00000558211 PABPN1Q86U42 306 aaKnown RBP eCLIP22.84■■□□□ 1.25
HMGB1P8-201ENST00000558211 CSRNP3Q8WYN3 585 aa22.81■■□□□ 1.24
HMGB1P8-201ENST00000558211 SHROOM4Q9ULL8 1493 aa22.78■■□□□ 1.24
HMGB1P8-201ENST00000558211 BICRAQ9NZM4 1560 aa22.73■■□□□ 1.23
HMGB1P8-201ENST00000558211 RNF39Q9H2S5 420 aa22.64■■□□□ 1.21
HMGB1P8-201ENST00000558211 U3KPZ7 1027 aaPredicted RBP22.64■■□□□ 1.21
HMGB1P8-201ENST00000558211 MYCNP04198 464 aaPredicted RBP22.54■■□□□ 1.2
HMGB1P8-201ENST00000558211 C1QBPQ07021 282 aaKnown RBP22.34■■□□□ 1.17
HMGB1P8-201ENST00000558211 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.29■■□□□ 1.16
HMGB1P8-201ENST00000558211 HNRNPUL2Q1KMD3 747 aaKnown RBP22.29■■□□□ 1.16
HMGB1P8-201ENST00000558211 SAMD1Q6SPF0 538 aaPredicted RBP22.23■■□□□ 1.15
HMGB1P8-201ENST00000558211 CECR2Q9BXF3 1484 aa22.12■■□□□ 1.13
HMGB1P8-201ENST00000558211 EIF4G1Q04637 1599 aaKnown RBP22.12■■□□□ 1.13
HMGB1P8-201ENST00000558211 ATXN8OSP0DMR3 200 aa22.11■■□□□ 1.13
HMGB1P8-201ENST00000558211 APLP2Q06481 763 aa22.02■■□□□ 1.12
HMGB1P8-201ENST00000558211 ATF5Q9Y2D1 282 aaPredicted RBP22■■□□□ 1.11
HMGB1P8-201ENST00000558211 SPINK5Q9NQ38 1064 aaPredicted RBP21.98■■□□□ 1.11
HMGB1P8-201ENST00000558211 CC2D2AQ9P2K1 1620 aa21.98■■□□□ 1.11
HMGB1P8-201ENST00000558211 BAZ1AQ9NRL2 1556 aaPredicted RBP21.96■■□□□ 1.11
HMGB1P8-201ENST00000558211 SMARCA4P51532 1647 aa21.95■■□□□ 1.1
HMGB1P8-201ENST00000558211 CACNB1Q02641 598 aaPredicted RBP21.93■■□□□ 1.1
HMGB1P8-201ENST00000558211 MROH2BQ7Z745 1585 aa21.91■■□□□ 1.1
HMGB1P8-201ENST00000558211 CAPN15O75808 1086 aa21.81■■□□□ 1.08
HMGB1P8-201ENST00000558211 ZNF219Q9P2Y4 722 aaPredicted RBP21.76■■□□□ 1.07
HMGB1P8-201ENST00000558211 RSF1Q96T23 1441 aaPredicted RBP21.75■■□□□ 1.07
HMGB1P8-201ENST00000558211 ATAD2BQ9ULI0 1458 aa21.75■■□□□ 1.07
HMGB1P8-201ENST00000558211 SMARCA2P51531 1590 aa21.73■■□□□ 1.07
HMGB1P8-201ENST00000558211 TRHP20396 242 aaPredicted RBP21.72■■□□□ 1.07
HMGB1P8-201ENST00000558211 WIZO95785 1651 aa21.72■■□□□ 1.07
HMGB1P8-201ENST00000558211 PEG3Q9GZU2 1588 aa21.66■■□□□ 1.06
HMGB1P8-201ENST00000558211 NCAPD3P42695 1498 aa21.66■■□□□ 1.06
HMGB1P8-201ENST00000558211 BAZ1BQ9UIG0 1483 aaKnown RBP21.61■■□□□ 1.05
HMGB1P8-201ENST00000558211 SUPT5HO00267 1087 aaKnown RBP21.61■■□□□ 1.05
HMGB1P8-201ENST00000558211 HMGXB3Q12766 1538 aa21.56■■□□□ 1.04
HMGB1P8-201ENST00000558211 DSG3P32926 999 aa21.54■■□□□ 1.04
HMGB1P8-201ENST00000558211 TOP2AP11388 1531 aaKnown RBP21.44■■□□□ 1.02
HMGB1P8-201ENST00000558211 ABCB7O75027 752 aa21.42■■□□□ 1.02
HMGB1P8-201ENST00000558211 POLA2Q14181 598 aa21.42■■□□□ 1.02
HMGB1P8-201ENST00000558211 CCDC88BA6NC98 1476 aa21.23■□□□□ 0.99
HMGB1P8-201ENST00000558211 NESP48681 1621 aa21.14■□□□□ 0.97
HMGB1P8-201ENST00000558211 CADPSQ9ULU8 1353 aa21.09■□□□□ 0.97
HMGB1P8-201ENST00000558211 MKRN4PQ13434 485 aaPredicted RBP21.05■□□□□ 0.96
HMGB1P8-201ENST00000558211 ZBTB12Q9Y330 459 aaPredicted RBP21.05■□□□□ 0.96
HMGB1P8-201ENST00000558211 LAMC3Q9Y6N6 1575 aa21.05■□□□□ 0.96
HMGB1P8-201ENST00000558211 CFTRP13569 1480 aa21■□□□□ 0.95
HMGB1P8-201ENST00000558211 FBLN2P98095 1184 aa20.96■□□□□ 0.95
HMGB1P8-201ENST00000558211 ERCC6Q03468 1493 aa20.94■□□□□ 0.94
HMGB1P8-201ENST00000558211 PDS5BQ9NTI5 1447 aa20.93■□□□□ 0.94
HMGB1P8-201ENST00000558211 PRDM2Q13029 1718 aa20.88■□□□□ 0.93
HMGB1P8-201ENST00000558211 KIF21AQ7Z4S6 1674 aa20.88■□□□□ 0.93
HMGB1P8-201ENST00000558211 FANCD2Q9BXW9 1451 aa20.86■□□□□ 0.93
HMGB1P8-201ENST00000558211 CEP164Q9UPV0 1460 aa20.8■□□□□ 0.92
HMGB1P8-201ENST00000558211 OSCARQ8IYS5 282 aa20.7■□□□□ 0.9
HMGB1P8-201ENST00000558211 MRC2Q9UBG0 1479 aa20.69■□□□□ 0.9
HMGB1P8-201ENST00000558211 THOC2Q8NI27 1593 aaKnown RBP20.68■□□□□ 0.9
HMGB1P8-201ENST00000558211 URB2Q14146 1524 aaKnown RBP20.63■□□□□ 0.89
HMGB1P8-201ENST00000558211 ABCC8Q09428 1581 aa20.59■□□□□ 0.89
HMGB1P8-201ENST00000558211 WDR62O43379 1518 aa20.58■□□□□ 0.88
HMGB1P8-201ENST00000558211 TOPBP1Q92547 1522 aa20.55■□□□□ 0.88
HMGB1P8-201ENST00000558211 FKBP8Q14318 412 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms