RNA–Protein interactions for RNA: ENST00000608254.1

PTCHD1-AS-202, Transcript of PTCHD1 antisense RNA (head to head), humanhuman

TSL 4 BASIC

Gene PTCHD1-AS, Length 557 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-AS-202ENST00000608254 NISCHQ9Y2I1 1504 aa28.57■■■□□ 2.16
PTCHD1-AS-202ENST00000608254 CCDC180Q9P1Z9 1646 aa25.21■■□□□ 1.63
PTCHD1-AS-202ENST00000608254 ABCC9O60706 1549 aa24.47■■□□□ 1.51
PTCHD1-AS-202ENST00000608254 ZCCHC6Q5VYS8 1495 aaKnown RBP23.85■■□□□ 1.41
PTCHD1-AS-202ENST00000608254 DCAF8L2P0C7V8 631 aa23.81■■□□□ 1.4
PTCHD1-AS-202ENST00000608254 NACADO15069 1562 aa23.7■■□□□ 1.38
PTCHD1-AS-202ENST00000608254 MYO15BQ96JP2 1530 aa23.69■■□□□ 1.38
PTCHD1-AS-202ENST00000608254 DCAF1Q9Y4B6 1507 aa23.67■■□□□ 1.38
PTCHD1-AS-202ENST00000608254 RB1CC1Q8TDY2 1594 aa23.65■■□□□ 1.38
PTCHD1-AS-202ENST00000608254 SCRIBQ14160 1630 aa23.03■■□□□ 1.28
PTCHD1-AS-202ENST00000608254 UNC13AQ9UPW8 1703 aa22.96■■□□□ 1.27
PTCHD1-AS-202ENST00000608254 PABPN1Q86U42 306 aaKnown RBP eCLIP22.95■■□□□ 1.26
PTCHD1-AS-202ENST00000608254 BICRAQ9NZM4 1560 aa22.9■■□□□ 1.26
PTCHD1-AS-202ENST00000608254 SHROOM4Q9ULL8 1493 aa22.75■■□□□ 1.23
PTCHD1-AS-202ENST00000608254 EIF4G1Q04637 1599 aaKnown RBP22.29■■□□□ 1.16
PTCHD1-AS-202ENST00000608254 DNAJC5BQ9UF47 199 aa22.25■■□□□ 1.15
PTCHD1-AS-202ENST00000608254 CECR2Q9BXF3 1484 aa22.22■■□□□ 1.15
PTCHD1-AS-202ENST00000608254 BAZ1AQ9NRL2 1556 aaPredicted RBP22.12■■□□□ 1.13
PTCHD1-AS-202ENST00000608254 CC2D2AQ9P2K1 1620 aa22.11■■□□□ 1.13
PTCHD1-AS-202ENST00000608254 SMARCA4P51532 1647 aa22.07■■□□□ 1.12
PTCHD1-AS-202ENST00000608254 MROH2BQ7Z745 1585 aa22.01■■□□□ 1.11
PTCHD1-AS-202ENST00000608254 ATAD2BQ9ULI0 1458 aa21.94■■□□□ 1.1
PTCHD1-AS-202ENST00000608254 SMARCA2P51531 1590 aa21.91■■□□□ 1.1
PTCHD1-AS-202ENST00000608254 NCAPD3P42695 1498 aa21.9■■□□□ 1.1
PTCHD1-AS-202ENST00000608254 RSF1Q96T23 1441 aaPredicted RBP21.89■■□□□ 1.1
PTCHD1-AS-202ENST00000608254 PEG3Q9GZU2 1588 aa21.88■■□□□ 1.09
PTCHD1-AS-202ENST00000608254 HMGXB3Q12766 1538 aa21.78■■□□□ 1.08
PTCHD1-AS-202ENST00000608254 BAZ1BQ9UIG0 1483 aaKnown RBP21.77■■□□□ 1.07
PTCHD1-AS-202ENST00000608254 WIZO95785 1651 aa21.73■■□□□ 1.07
PTCHD1-AS-202ENST00000608254 TOP2AP11388 1531 aaKnown RBP21.57■■□□□ 1.04
PTCHD1-AS-202ENST00000608254 SUPT5HO00267 1087 aaKnown RBP21.55■■□□□ 1.04
PTCHD1-AS-202ENST00000608254 CCDC88BA6NC98 1476 aa21.34■■□□□ 1.01
PTCHD1-AS-202ENST00000608254 CADPSQ9ULU8 1353 aa21.29■■□□□ 1
PTCHD1-AS-202ENST00000608254 NESP48681 1621 aa21.24■□□□□ 0.99
PTCHD1-AS-202ENST00000608254 LAMC3Q9Y6N6 1575 aa21.23■□□□□ 0.99
PTCHD1-AS-202ENST00000608254 CFTRP13569 1480 aa21.2■□□□□ 0.98
PTCHD1-AS-202ENST00000608254 PDS5BQ9NTI5 1447 aa21.14■□□□□ 0.98
PTCHD1-AS-202ENST00000608254 ERCC6Q03468 1493 aa21.08■□□□□ 0.97
PTCHD1-AS-202ENST00000608254 FANCD2Q9BXW9 1451 aa21.01■□□□□ 0.95
PTCHD1-AS-202ENST00000608254 CEP164Q9UPV0 1460 aa20.95■□□□□ 0.94
PTCHD1-AS-202ENST00000608254 KIF21AQ7Z4S6 1674 aa20.91■□□□□ 0.94
PTCHD1-AS-202ENST00000608254 PRDM2Q13029 1718 aa20.89■□□□□ 0.93
PTCHD1-AS-202ENST00000608254 MRC2Q9UBG0 1479 aa20.88■□□□□ 0.93
PTCHD1-AS-202ENST00000608254 THOC2Q8NI27 1593 aaKnown RBP20.82■□□□□ 0.92
PTCHD1-AS-202ENST00000608254 WDR62O43379 1518 aa20.78■□□□□ 0.92
PTCHD1-AS-202ENST00000608254 CUX2O14529 1486 aa20.77■□□□□ 0.92
PTCHD1-AS-202ENST00000608254 URB2Q14146 1524 aaKnown RBP20.77■□□□□ 0.92
PTCHD1-AS-202ENST00000608254 ABCC8Q09428 1581 aa20.75■□□□□ 0.91
PTCHD1-AS-202ENST00000608254 TOPBP1Q92547 1522 aa20.69■□□□□ 0.9
PTCHD1-AS-202ENST00000608254 DNMBPQ6XZF7 1577 aa20.68■□□□□ 0.9
PTCHD1-AS-202ENST00000608254 WRNQ14191 1432 aaPredicted RBP eCLIP20.63■□□□□ 0.89
PTCHD1-AS-202ENST00000608254 CUX1P39880 1505 aa20.63■□□□□ 0.89
PTCHD1-AS-202ENST00000608254 POLA1P09884 1462 aaPredicted RBP20.54■□□□□ 0.88
PTCHD1-AS-202ENST00000608254 IFT140Q96RY7 1462 aa20.53■□□□□ 0.88
PTCHD1-AS-202ENST00000608254 FGD5Q6ZNL6 1462 aa20.52■□□□□ 0.88
PTCHD1-AS-202ENST00000608254 TOP2BQ02880 1626 aa20.51■□□□□ 0.87
PTCHD1-AS-202ENST00000608254 SYNJ1O43426 1573 aa20.51■□□□□ 0.87
PTCHD1-AS-202ENST00000608254 SOGA1O94964 1423 aa20.5■□□□□ 0.87
PTCHD1-AS-202ENST00000608254 BIVM-ERCC5R4GMW8 1640 aa20.48■□□□□ 0.87
PTCHD1-AS-202ENST00000608254 RAD54L2Q9Y4B4 1467 aa20.45■□□□□ 0.86
PTCHD1-AS-202ENST00000608254 TARBP1Q13395 1621 aaKnown RBP20.42■□□□□ 0.86
PTCHD1-AS-202ENST00000608254 ZNF608Q9ULD9 1512 aaPredicted RBP20.37■□□□□ 0.85
PTCHD1-AS-202ENST00000608254 TRIM41Q8WV44 630 aa20.37■□□□□ 0.85
PTCHD1-AS-202ENST00000608254 ABCA10Q8WWZ4 1543 aa20.36■□□□□ 0.85
PTCHD1-AS-202ENST00000608254 TDRD9Q8NDG6 1382 aaKnown RBP20.34■□□□□ 0.85
PTCHD1-AS-202ENST00000608254 AQRO60306 1485 aaKnown RBP eCLIP20.32■□□□□ 0.84
PTCHD1-AS-202ENST00000608254 WDR97A6NE52 1622 aa20.3■□□□□ 0.84
PTCHD1-AS-202ENST00000608254 CHIC1Q5VXU3 224 aa20.29■□□□□ 0.84
PTCHD1-AS-202ENST00000608254 EIF4G3O43432 1585 aaKnown RBP20.26■□□□□ 0.83
PTCHD1-AS-202ENST00000608254 GAPVD1Q14C86 1478 aa20.24■□□□□ 0.83
PTCHD1-AS-202ENST00000608254 GRIN2BQ13224 1484 aa20.22■□□□□ 0.83
PTCHD1-AS-202ENST00000608254 ABCA5Q8WWZ7 1642 aa20.2■□□□□ 0.82
PTCHD1-AS-202ENST00000608254 KIF27Q86VH2 1401 aa20.19■□□□□ 0.82
PTCHD1-AS-202ENST00000608254 SNAPC4Q5SXM2 1469 aa20.12■□□□□ 0.81
PTCHD1-AS-202ENST00000608254 MAGI1Q96QZ7 1491 aaPredicted RBP20.12■□□□□ 0.81
PTCHD1-AS-202ENST00000608254 ERICH3Q5RHP9 1530 aa20.11■□□□□ 0.81
PTCHD1-AS-202ENST00000608254 IGF1RP08069 1367 aa20.09■□□□□ 0.81
PTCHD1-AS-202ENST00000608254 PBRM1Q86U86 1689 aa20.07■□□□□ 0.8
PTCHD1-AS-202ENST00000608254 CHMP7Q8WUX9 453 aaPredicted RBP20.06■□□□□ 0.8
PTCHD1-AS-202ENST00000608254 FBLN2P98095 1184 aa20.05■□□□□ 0.8
PTCHD1-AS-202ENST00000608254 RUSC2Q8N2Y8 1516 aa20.05■□□□□ 0.8
PTCHD1-AS-202ENST00000608254 SYNJ2O15056 1496 aa20.05■□□□□ 0.8
PTCHD1-AS-202ENST00000608254 FHAD1B1AJZ9 1412 aa20.04■□□□□ 0.8
PTCHD1-AS-202ENST00000608254 OSCARQ8IYS5 282 aa20.02■□□□□ 0.8
PTCHD1-AS-202ENST00000608254 EEA1Q15075 1411 aa20■□□□□ 0.79
PTCHD1-AS-202ENST00000608254 ADAMTS12P58397 1594 aa19.99■□□□□ 0.79
PTCHD1-AS-202ENST00000608254 CARMIL1Q5VZK9 1371 aa19.97■□□□□ 0.79
PTCHD1-AS-202ENST00000608254 CSRNP3Q8WYN3 585 aa19.95■□□□□ 0.78
PTCHD1-AS-202ENST00000608254 CUL7Q14999 1698 aa19.94■□□□□ 0.78
PTCHD1-AS-202ENST00000608254 GRIN2AQ12879 1464 aa19.93■□□□□ 0.78
PTCHD1-AS-202ENST00000608254 FAM9AQ8IZU1 332 aaPredicted RBP19.91■□□□□ 0.78
PTCHD1-AS-202ENST00000608254 CHD1O14646 1710 aa19.9■□□□□ 0.78
PTCHD1-AS-202ENST00000608254 DNAJC5Q9H3Z4 198 aa19.87■□□□□ 0.77
PTCHD1-AS-202ENST00000608254 PRXQ9BXM0 1461 aa19.86■□□□□ 0.77
PTCHD1-AS-202ENST00000608254 RAPGEF2Q9Y4G8 1499 aa19.86■□□□□ 0.77
PTCHD1-AS-202ENST00000608254 NUP160Q12769 1436 aa19.85■□□□□ 0.77
PTCHD1-AS-202ENST00000608254 CEP170Q5SW79 1584 aa19.78■□□□□ 0.76
PTCHD1-AS-202ENST00000608254 CLASP1Q7Z460 1538 aa19.77■□□□□ 0.76
PTCHD1-AS-202ENST00000608254 KIAA0586Q9BVV6 1533 aa19.74■□□□□ 0.75
PTCHD1-AS-202ENST00000608254 KIF21BO75037 1637 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms