RNA–Protein interactions for RNA: ENST00000367388.4

LHX9-202, Transcript of LIM homeobox 9, humanhuman

TSL 2 BASIC

Gene LHX9, Length 758 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX9-202ENST00000367388 NISCHQ9Y2I1 1504 aa28.31■■■□□ 2.12
LHX9-202ENST00000367388 AEBP2Q6ZN18 517 aaPredicted RBP25.71■■□□□ 1.71
LHX9-202ENST00000367388 CCDC180Q9P1Z9 1646 aa24.92■■□□□ 1.58
LHX9-202ENST00000367388 ABCC9O60706 1549 aa24.16■■□□□ 1.46
LHX9-202ENST00000367388 CHIC1Q5VXU3 224 aa24.09■■□□□ 1.45
LHX9-202ENST00000367388 DCAF8L2P0C7V8 631 aa23.7■■□□□ 1.38
LHX9-202ENST00000367388 ZCCHC6Q5VYS8 1495 aaKnown RBP23.64■■□□□ 1.38
LHX9-202ENST00000367388 DCAF1Q9Y4B6 1507 aa23.38■■□□□ 1.33
LHX9-202ENST00000367388 NACADO15069 1562 aa23.38■■□□□ 1.33
LHX9-202ENST00000367388 RB1CC1Q8TDY2 1594 aa23.33■■□□□ 1.33
LHX9-202ENST00000367388 MYO15BQ96JP2 1530 aa23.32■■□□□ 1.32
LHX9-202ENST00000367388 SCRIBQ14160 1630 aa22.87■■□□□ 1.25
LHX9-202ENST00000367388 UNC13AQ9UPW8 1703 aa22.77■■□□□ 1.23
LHX9-202ENST00000367388 SHROOM4Q9ULL8 1493 aa22.75■■□□□ 1.23
LHX9-202ENST00000367388 PABPN1Q86U42 306 aaKnown RBP eCLIP22.71■■□□□ 1.23
LHX9-202ENST00000367388 BICRAQ9NZM4 1560 aa22.6■■□□□ 1.21
LHX9-202ENST00000367388 DNAJC5BQ9UF47 199 aa22.25■■□□□ 1.15
LHX9-202ENST00000367388 SENP3Q9H4L4 574 aaPredicted RBP22.13■■□□□ 1.13
LHX9-202ENST00000367388 CECR2Q9BXF3 1484 aa22.06■■□□□ 1.12
LHX9-202ENST00000367388 EIF4G1Q04637 1599 aaKnown RBP21.98■■□□□ 1.11
LHX9-202ENST00000367388 BAZ1AQ9NRL2 1556 aaPredicted RBP21.9■■□□□ 1.1
LHX9-202ENST00000367388 SMARCA4P51532 1647 aa21.87■■□□□ 1.09
LHX9-202ENST00000367388 MROH2BQ7Z745 1585 aa21.86■■□□□ 1.09
LHX9-202ENST00000367388 CC2D2AQ9P2K1 1620 aa21.8■■□□□ 1.08
LHX9-202ENST00000367388 RSF1Q96T23 1441 aaPredicted RBP21.75■■□□□ 1.07
LHX9-202ENST00000367388 ATAD2BQ9ULI0 1458 aa21.68■■□□□ 1.06
LHX9-202ENST00000367388 PHF23Q9BUL5 403 aaPredicted RBP21.67■■□□□ 1.06
LHX9-202ENST00000367388 SMARCA2P51531 1590 aa21.65■■□□□ 1.06
LHX9-202ENST00000367388 WIZO95785 1651 aa21.63■■□□□ 1.05
LHX9-202ENST00000367388 SUPT5HO00267 1087 aaKnown RBP21.63■■□□□ 1.05
LHX9-202ENST00000367388 PEG3Q9GZU2 1588 aa21.6■■□□□ 1.05
LHX9-202ENST00000367388 NCAPD3P42695 1498 aa21.59■■□□□ 1.05
LHX9-202ENST00000367388 BAZ1BQ9UIG0 1483 aaKnown RBP21.53■■□□□ 1.04
LHX9-202ENST00000367388 HMGXB3Q12766 1538 aa21.49■■□□□ 1.03
LHX9-202ENST00000367388 TOP2AP11388 1531 aaKnown RBP21.39■■□□□ 1.02
LHX9-202ENST00000367388 CCDC88BA6NC98 1476 aa21.2■□□□□ 0.98
LHX9-202ENST00000367388 CADPSQ9ULU8 1353 aa21.02■□□□□ 0.96
LHX9-202ENST00000367388 NESP48681 1621 aa21.01■□□□□ 0.95
LHX9-202ENST00000367388 CFTRP13569 1480 aa20.94■□□□□ 0.94
LHX9-202ENST00000367388 LAMC3Q9Y6N6 1575 aa20.93■□□□□ 0.94
LHX9-202ENST00000367388 PDS5BQ9NTI5 1447 aa20.84■□□□□ 0.93
LHX9-202ENST00000367388 ERCC6Q03468 1493 aa20.79■□□□□ 0.92
LHX9-202ENST00000367388 FANCD2Q9BXW9 1451 aa20.78■□□□□ 0.92
LHX9-202ENST00000367388 PRDM2Q13029 1718 aa20.74■□□□□ 0.91
LHX9-202ENST00000367388 KIF21AQ7Z4S6 1674 aa20.71■□□□□ 0.91
LHX9-202ENST00000367388 CEP164Q9UPV0 1460 aa20.7■□□□□ 0.9
LHX9-202ENST00000367388 FOXD1Q16676 465 aa20.67■□□□□ 0.9
LHX9-202ENST00000367388 MRC2Q9UBG0 1479 aa20.58■□□□□ 0.89
LHX9-202ENST00000367388 POTEDQ86YR6 584 aa20.57■□□□□ 0.88
LHX9-202ENST00000367388 URB2Q14146 1524 aaKnown RBP20.54■□□□□ 0.88
LHX9-202ENST00000367388 ABCC8Q09428 1581 aa20.54■□□□□ 0.88
LHX9-202ENST00000367388 THOC2Q8NI27 1593 aaKnown RBP20.52■□□□□ 0.88
LHX9-202ENST00000367388 WRNQ14191 1432 aaPredicted RBP eCLIP20.5■□□□□ 0.87
LHX9-202ENST00000367388 TOPBP1Q92547 1522 aa20.48■□□□□ 0.87
LHX9-202ENST00000367388 CUX1P39880 1505 aa20.47■□□□□ 0.87
LHX9-202ENST00000367388 DNMBPQ6XZF7 1577 aa20.46■□□□□ 0.87
LHX9-202ENST00000367388 WDR62O43379 1518 aa20.46■□□□□ 0.87
LHX9-202ENST00000367388 SYNJ1O43426 1573 aa20.4■□□□□ 0.86
LHX9-202ENST00000367388 CUX2O14529 1486 aa20.37■□□□□ 0.85
LHX9-202ENST00000367388 TRIM41Q8WV44 630 aa20.37■□□□□ 0.85
LHX9-202ENST00000367388 TOP2BQ02880 1626 aa20.36■□□□□ 0.85
LHX9-202ENST00000367388 FGD5Q6ZNL6 1462 aa20.35■□□□□ 0.85
LHX9-202ENST00000367388 BIVM-ERCC5R4GMW8 1640 aa20.35■□□□□ 0.85
LHX9-202ENST00000367388 DNAJC5Q9H3Z4 198 aa20.34■□□□□ 0.85
LHX9-202ENST00000367388 POLA1P09884 1462 aaPredicted RBP20.33■□□□□ 0.85
LHX9-202ENST00000367388 SOGA1O94964 1423 aa20.29■□□□□ 0.84
LHX9-202ENST00000367388 RAD54L2Q9Y4B4 1467 aa20.28■□□□□ 0.84
LHX9-202ENST00000367388 IFT140Q96RY7 1462 aa20.25■□□□□ 0.83
LHX9-202ENST00000367388 TARBP1Q13395 1621 aaKnown RBP20.19■□□□□ 0.82
LHX9-202ENST00000367388 TDRD9Q8NDG6 1382 aaKnown RBP20.16■□□□□ 0.82
LHX9-202ENST00000367388 ZNF608Q9ULD9 1512 aaPredicted RBP20.15■□□□□ 0.82
LHX9-202ENST00000367388 ABCA10Q8WWZ4 1543 aa20.14■□□□□ 0.81
LHX9-202ENST00000367388 AQRO60306 1485 aaKnown RBP eCLIP20.11■□□□□ 0.81
LHX9-202ENST00000367388 WDR97A6NE52 1622 aa20.08■□□□□ 0.8
LHX9-202ENST00000367388 GAPVD1Q14C86 1478 aa20.05■□□□□ 0.8
LHX9-202ENST00000367388 KIF27Q86VH2 1401 aa20.04■□□□□ 0.8
LHX9-202ENST00000367388 EIF4G3O43432 1585 aaKnown RBP20.04■□□□□ 0.8
LHX9-202ENST00000367388 RUSC2Q8N2Y8 1516 aa20.02■□□□□ 0.79
LHX9-202ENST00000367388 FAM9AQ8IZU1 332 aaPredicted RBP20.01■□□□□ 0.79
LHX9-202ENST00000367388 ABCA5Q8WWZ7 1642 aa19.99■□□□□ 0.79
LHX9-202ENST00000367388 GRIN2BQ13224 1484 aa19.98■□□□□ 0.79
LHX9-202ENST00000367388 IGF1RP08069 1367 aa19.94■□□□□ 0.78
LHX9-202ENST00000367388 PBRM1Q86U86 1689 aa19.91■□□□□ 0.78
LHX9-202ENST00000367388 SNAPC4Q5SXM2 1469 aa19.91■□□□□ 0.78
LHX9-202ENST00000367388 CSRNP3Q8WYN3 585 aa19.9■□□□□ 0.78
LHX9-202ENST00000367388 ERICH3Q5RHP9 1530 aa19.9■□□□□ 0.78
LHX9-202ENST00000367388 EEA1Q15075 1411 aa19.89■□□□□ 0.77
LHX9-202ENST00000367388 FBLN2P98095 1184 aa19.88■□□□□ 0.77
LHX9-202ENST00000367388 MAGI1Q96QZ7 1491 aaPredicted RBP19.86■□□□□ 0.77
LHX9-202ENST00000367388 CHMP7Q8WUX9 453 aaPredicted RBP19.85■□□□□ 0.77
LHX9-202ENST00000367388 CARMIL1Q5VZK9 1371 aa19.84■□□□□ 0.77
LHX9-202ENST00000367388 FHAD1B1AJZ9 1412 aa19.82■□□□□ 0.76
LHX9-202ENST00000367388 SYNJ2O15056 1496 aa19.79■□□□□ 0.76
LHX9-202ENST00000367388 ADAMTS12P58397 1594 aa19.78■□□□□ 0.76
LHX9-202ENST00000367388 CUL7Q14999 1698 aa19.78■□□□□ 0.76
LHX9-202ENST00000367388 EHMT2Q96KQ7 1210 aa19.76■□□□□ 0.75
LHX9-202ENST00000367388 PRXQ9BXM0 1461 aa19.73■□□□□ 0.75
LHX9-202ENST00000367388 RAPGEF2Q9Y4G8 1499 aa19.73■□□□□ 0.75
LHX9-202ENST00000367388 MSH5O43196 834 aa19.72■□□□□ 0.75
LHX9-202ENST00000367388 CHD1O14646 1710 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms