RNA–Protein interactions for RNA: ENST00000361300.4

PHACTR3-203, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 1 (best) BASIC

Gene PHACTR3, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-203ENST00000361300 NISCHQ9Y2I1 1504 aa26.72■■□□□ 1.87
PHACTR3-203ENST00000361300 CCDC180Q9P1Z9 1646 aa23.07■■□□□ 1.28
PHACTR3-203ENST00000361300 ZCCHC6Q5VYS8 1495 aaKnown RBP22.54■■□□□ 1.2
PHACTR3-203ENST00000361300 SHROOM4Q9ULL8 1493 aa22.2■■□□□ 1.14
PHACTR3-203ENST00000361300 DCAF1Q9Y4B6 1507 aa22.05■■□□□ 1.12
PHACTR3-203ENST00000361300 DCAF8L2P0C7V8 631 aa21.94■■□□□ 1.1
PHACTR3-203ENST00000361300 MYO15BQ96JP2 1530 aa21.59■■□□□ 1.05
PHACTR3-203ENST00000361300 SUPT5HO00267 1087 aaKnown RBP21.56■■□□□ 1.04
PHACTR3-203ENST00000361300 ABCC9O60706 1549 aa21.45■■□□□ 1.02
PHACTR3-203ENST00000361300 NACADO15069 1562 aa21.36■■□□□ 1.01
PHACTR3-203ENST00000361300 SCRIBQ14160 1630 aa21.35■■□□□ 1.01
PHACTR3-203ENST00000361300 RB1CC1Q8TDY2 1594 aa21.08■□□□□ 0.97
PHACTR3-203ENST00000361300 RSF1Q96T23 1441 aaPredicted RBP20.91■□□□□ 0.94
PHACTR3-203ENST00000361300 CHIC1Q5VXU3 224 aa20.86■□□□□ 0.93
PHACTR3-203ENST00000361300 CECR2Q9BXF3 1484 aa20.76■□□□□ 0.91
PHACTR3-203ENST00000361300 UNC13AQ9UPW8 1703 aa20.74■□□□□ 0.91
PHACTR3-203ENST00000361300 MROH2BQ7Z745 1585 aa20.69■□□□□ 0.9
PHACTR3-203ENST00000361300 BAZ1AQ9NRL2 1556 aaPredicted RBP20.59■□□□□ 0.89
PHACTR3-203ENST00000361300 WIZO95785 1651 aa20.57■□□□□ 0.88
PHACTR3-203ENST00000361300 BICRAQ9NZM4 1560 aa20.48■□□□□ 0.87
PHACTR3-203ENST00000361300 SMARCA4P51532 1647 aa20.46■□□□□ 0.87
PHACTR3-203ENST00000361300 TOP2AP11388 1531 aaKnown RBP20.33■□□□□ 0.85
PHACTR3-203ENST00000361300 PABPN1Q86U42 306 aaKnown RBP eCLIP20.32■□□□□ 0.84
PHACTR3-203ENST00000361300 EIF4G1Q04637 1599 aaKnown RBP20.22■□□□□ 0.83
PHACTR3-203ENST00000361300 TRIM41Q8WV44 630 aa20.19■□□□□ 0.82
PHACTR3-203ENST00000361300 SMARCA2P51531 1590 aa20.17■□□□□ 0.82
PHACTR3-203ENST00000361300 PEG3Q9GZU2 1588 aa20.15■□□□□ 0.82
PHACTR3-203ENST00000361300 CCDC88BA6NC98 1476 aa20.13■□□□□ 0.81
PHACTR3-203ENST00000361300 LOC105371045A0A1W2PR82 267 aa20.11■□□□□ 0.81
PHACTR3-203ENST00000361300 ATAD2BQ9ULI0 1458 aa19.99■□□□□ 0.79
PHACTR3-203ENST00000361300 BAZ1BQ9UIG0 1483 aaKnown RBP19.91■□□□□ 0.78
PHACTR3-203ENST00000361300 ABCC8Q09428 1581 aa19.9■□□□□ 0.78
PHACTR3-203ENST00000361300 FAM9AQ8IZU1 332 aaPredicted RBP19.9■□□□□ 0.78
PHACTR3-203ENST00000361300 HMGXB3Q12766 1538 aa19.74■□□□□ 0.75
PHACTR3-203ENST00000361300 NCAPD3P42695 1498 aa19.71■□□□□ 0.75
PHACTR3-203ENST00000361300 PCGF6Q9BYE7 350 aa19.67■□□□□ 0.74
PHACTR3-203ENST00000361300 WRNQ14191 1432 aaPredicted RBP eCLIP19.66■□□□□ 0.74
PHACTR3-203ENST00000361300 EHMT2Q96KQ7 1210 aa19.64■□□□□ 0.73
PHACTR3-203ENST00000361300 SYNJ1O43426 1573 aa19.61■□□□□ 0.73
PHACTR3-203ENST00000361300 SOGA1O94964 1423 aa19.6■□□□□ 0.73
PHACTR3-203ENST00000361300 EEA1Q15075 1411 aa19.6■□□□□ 0.73
PHACTR3-203ENST00000361300 TRIM26Q12899 539 aaPredicted RBP19.52■□□□□ 0.72
PHACTR3-203ENST00000361300 RUSC2Q8N2Y8 1516 aa19.52■□□□□ 0.71
PHACTR3-203ENST00000361300 HRCP23327 699 aa19.49■□□□□ 0.71
PHACTR3-203ENST00000361300 CSRNP3Q8WYN3 585 aa19.46■□□□□ 0.71
PHACTR3-203ENST00000361300 TOP2BQ02880 1626 aa19.46■□□□□ 0.71
PHACTR3-203ENST00000361300 BIVM-ERCC5R4GMW8 1640 aa19.44■□□□□ 0.7
PHACTR3-203ENST00000361300 CFTRP13569 1480 aa19.41■□□□□ 0.7
PHACTR3-203ENST00000361300 CC2D2AQ9P2K1 1620 aa19.41■□□□□ 0.7
PHACTR3-203ENST00000361300 TNIKQ9UKE5 1360 aa19.4■□□□□ 0.7
PHACTR3-203ENST00000361300 GOLGA3Q08378 1498 aa19.39■□□□□ 0.69
PHACTR3-203ENST00000361300 PRDM2Q13029 1718 aa19.39■□□□□ 0.69
PHACTR3-203ENST00000361300 CEP162Q5TB80 1403 aa19.36■□□□□ 0.69
PHACTR3-203ENST00000361300 KIF21BO75037 1637 aa19.36■□□□□ 0.69
PHACTR3-203ENST00000361300 CEP164Q9UPV0 1460 aa19.33■□□□□ 0.69
PHACTR3-203ENST00000361300 CUX1P39880 1505 aa19.32■□□□□ 0.68
PHACTR3-203ENST00000361300 UBTFP17480 764 aaKnown RBP19.27■□□□□ 0.68
PHACTR3-203ENST00000361300 CADPSQ9ULU8 1353 aa19.24■□□□□ 0.67
PHACTR3-203ENST00000361300 RAPGEF2Q9Y4G8 1499 aa19.18■□□□□ 0.66
PHACTR3-203ENST00000361300 PPARGC1BQ86YN6 1023 aaKnown RBP19.16■□□□□ 0.66
PHACTR3-203ENST00000361300 ERICH3Q5RHP9 1530 aa19.13■□□□□ 0.65
PHACTR3-203ENST00000361300 KIF27Q86VH2 1401 aa19.11■□□□□ 0.65
PHACTR3-203ENST00000361300 PRXQ9BXM0 1461 aa19.11■□□□□ 0.65
PHACTR3-203ENST00000361300 CLIP1P30622 1438 aa19.1■□□□□ 0.65
PHACTR3-203ENST00000361300 FANCD2Q9BXW9 1451 aa19.06■□□□□ 0.64
PHACTR3-203ENST00000361300 FGD5Q6ZNL6 1462 aa19.02■□□□□ 0.64
PHACTR3-203ENST00000361300 VPS8Q8N3P4 1428 aa18.99■□□□□ 0.63
PHACTR3-203ENST00000361300 NESP48681 1621 aa18.99■□□□□ 0.63
PHACTR3-203ENST00000361300 CUX2O14529 1486 aa18.99■□□□□ 0.63
PHACTR3-203ENST00000361300 DNMBPQ6XZF7 1577 aa18.98■□□□□ 0.63
PHACTR3-203ENST00000361300 LAMC3Q9Y6N6 1575 aa18.97■□□□□ 0.63
PHACTR3-203ENST00000361300 ZEB1P37275 1124 aaPredicted RBP18.96■□□□□ 0.63
PHACTR3-203ENST00000361300 TTBK1Q5TCY1 1321 aaPredicted RBP18.93■□□□□ 0.62
PHACTR3-203ENST00000361300 TOPBP1Q92547 1522 aa18.91■□□□□ 0.62
PHACTR3-203ENST00000361300 IGF1RP08069 1367 aa18.89■□□□□ 0.62
PHACTR3-203ENST00000361300 RANGAP1P46060 587 aaPredicted RBP18.88■□□□□ 0.61
PHACTR3-203ENST00000361300 ARAP1Q96P48 1450 aa18.87■□□□□ 0.61
PHACTR3-203ENST00000361300 POLA1P09884 1462 aaPredicted RBP18.86■□□□□ 0.61
PHACTR3-203ENST00000361300 ABCA10Q8WWZ4 1543 aa18.84■□□□□ 0.61
PHACTR3-203ENST00000361300 RAD54L2Q9Y4B4 1467 aa18.82■□□□□ 0.6
PHACTR3-203ENST00000361300 URB2Q14146 1524 aaKnown RBP18.82■□□□□ 0.6
PHACTR3-203ENST00000361300 CARMIL1Q5VZK9 1371 aa18.81■□□□□ 0.6
PHACTR3-203ENST00000361300 DNAJC5BQ9UF47 199 aa18.8■□□□□ 0.6
PHACTR3-203ENST00000361300 PDS5BQ9NTI5 1447 aa18.8■□□□□ 0.6
PHACTR3-203ENST00000361300 APLP2Q06481 763 aa18.79■□□□□ 0.6
PHACTR3-203ENST00000361300 WDR97A6NE52 1622 aa18.78■□□□□ 0.6
PHACTR3-203ENST00000361300 KIF21AQ7Z4S6 1674 aa18.77■□□□□ 0.6
PHACTR3-203ENST00000361300 ARHGAP35Q9NRY4 1499 aa18.77■□□□□ 0.6
PHACTR3-203ENST00000361300 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.73■□□□□ 0.59
PHACTR3-203ENST00000361300 CUL7Q14999 1698 aa18.73■□□□□ 0.59
PHACTR3-203ENST00000361300 AEBP2Q6ZN18 517 aaPredicted RBP18.72■□□□□ 0.59
PHACTR3-203ENST00000361300 CCER1Q8TC90 406 aaPredicted RBP18.69■□□□□ 0.58
PHACTR3-203ENST00000361300 ABCA5Q8WWZ7 1642 aa18.68■□□□□ 0.58
PHACTR3-203ENST00000361300 CTTNBP2Q8WZ74 1663 aa18.62■□□□□ 0.57
PHACTR3-203ENST00000361300 TARBP1Q13395 1621 aaKnown RBP18.6■□□□□ 0.57
PHACTR3-203ENST00000361300 GAPVD1Q14C86 1478 aa18.59■□□□□ 0.57
PHACTR3-203ENST00000361300 TDRD9Q8NDG6 1382 aaKnown RBP18.58■□□□□ 0.56
PHACTR3-203ENST00000361300 KANK4Q5T7N3 995 aaPredicted RBP18.58■□□□□ 0.56
PHACTR3-203ENST00000361300 MRC2Q9UBG0 1479 aa18.56■□□□□ 0.56
PHACTR3-203ENST00000361300 HNRNPUL2Q1KMD3 747 aaKnown RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms