RNA–Protein interactions for RNA: ENST00000439928.2

SPATA13-213, Transcript of spermatogenesis associated 13, humanhuman

TSL 1 (best) BASIC

Gene SPATA13, Length 1,721 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA13-213ENST00000439928 NISCHQ9Y2I1 1504 aa28.16■■■□□ 2.1
SPATA13-213ENST00000439928 CCDC180Q9P1Z9 1646 aa24.85■■□□□ 1.57
SPATA13-213ENST00000439928 ZCCHC6Q5VYS8 1495 aaKnown RBP23.61■■□□□ 1.37
SPATA13-213ENST00000439928 ABCC9O60706 1549 aa23.61■■□□□ 1.37
SPATA13-213ENST00000439928 DCAF1Q9Y4B6 1507 aa23.32■■□□□ 1.32
SPATA13-213ENST00000439928 DCAF8L2P0C7V8 631 aa23.29■■□□□ 1.32
SPATA13-213ENST00000439928 MYO15BQ96JP2 1530 aa23.17■■□□□ 1.3
SPATA13-213ENST00000439928 NACADO15069 1562 aa23.14■■□□□ 1.3
SPATA13-213ENST00000439928 RB1CC1Q8TDY2 1594 aa23.04■■□□□ 1.28
SPATA13-213ENST00000439928 SCRIBQ14160 1630 aa22.72■■□□□ 1.23
SPATA13-213ENST00000439928 SHROOM4Q9ULL8 1493 aa22.68■■□□□ 1.22
SPATA13-213ENST00000439928 UNC13AQ9UPW8 1703 aa22.65■■□□□ 1.22
SPATA13-213ENST00000439928 BICRAQ9NZM4 1560 aa22.27■■□□□ 1.16
SPATA13-213ENST00000439928 PABPN1Q86U42 306 aaKnown RBP eCLIP22.12■■□□□ 1.13
SPATA13-213ENST00000439928 CECR2Q9BXF3 1484 aa21.84■■□□□ 1.09
SPATA13-213ENST00000439928 BAZ1AQ9NRL2 1556 aaPredicted RBP21.83■■□□□ 1.08
SPATA13-213ENST00000439928 SMARCA4P51532 1647 aa21.77■■□□□ 1.08
SPATA13-213ENST00000439928 MROH2BQ7Z745 1585 aa21.71■■□□□ 1.07
SPATA13-213ENST00000439928 RSF1Q96T23 1441 aaPredicted RBP21.67■■□□□ 1.06
SPATA13-213ENST00000439928 SUPT5HO00267 1087 aaKnown RBP21.66■■□□□ 1.06
SPATA13-213ENST00000439928 EIF4G1Q04637 1599 aaKnown RBP21.66■■□□□ 1.06
SPATA13-213ENST00000439928 WIZO95785 1651 aa21.59■■□□□ 1.05
SPATA13-213ENST00000439928 PEG3Q9GZU2 1588 aa21.51■■□□□ 1.03
SPATA13-213ENST00000439928 SMARCA2P51531 1590 aa21.48■■□□□ 1.03
SPATA13-213ENST00000439928 CC2D2AQ9P2K1 1620 aa21.43■■□□□ 1.02
SPATA13-213ENST00000439928 ATAD2BQ9ULI0 1458 aa21.41■■□□□ 1.02
SPATA13-213ENST00000439928 TOP2AP11388 1531 aaKnown RBP21.36■■□□□ 1.01
SPATA13-213ENST00000439928 BAZ1BQ9UIG0 1483 aaKnown RBP21.33■■□□□ 1
SPATA13-213ENST00000439928 HMGXB3Q12766 1538 aa21.3■■□□□ 1
SPATA13-213ENST00000439928 NCAPD3P42695 1498 aa21.28■■□□□ 1
SPATA13-213ENST00000439928 CCDC88BA6NC98 1476 aa21.06■□□□□ 0.96
SPATA13-213ENST00000439928 DNAJC5BQ9UF47 199 aa20.95■□□□□ 0.94
SPATA13-213ENST00000439928 PRDM2Q13029 1718 aa20.85■□□□□ 0.93
SPATA13-213ENST00000439928 CFTRP13569 1480 aa20.73■□□□□ 0.91
SPATA13-213ENST00000439928 LAMC3Q9Y6N6 1575 aa20.71■□□□□ 0.91
SPATA13-213ENST00000439928 CADPSQ9ULU8 1353 aa20.7■□□□□ 0.9
SPATA13-213ENST00000439928 NESP48681 1621 aa20.61■□□□□ 0.89
SPATA13-213ENST00000439928 ABCC8Q09428 1581 aa20.57■□□□□ 0.88
SPATA13-213ENST00000439928 CHIC1Q5VXU3 224 aa20.55■□□□□ 0.88
SPATA13-213ENST00000439928 KIF21AQ7Z4S6 1674 aa20.51■□□□□ 0.87
SPATA13-213ENST00000439928 FANCD2Q9BXW9 1451 aa20.51■□□□□ 0.87
SPATA13-213ENST00000439928 PDS5BQ9NTI5 1447 aa20.49■□□□□ 0.87
SPATA13-213ENST00000439928 WRNQ14191 1432 aaPredicted RBP eCLIP20.45■□□□□ 0.87
SPATA13-213ENST00000439928 CEP164Q9UPV0 1460 aa20.45■□□□□ 0.86
SPATA13-213ENST00000439928 TRIM41Q8WV44 630 aa20.43■□□□□ 0.86
SPATA13-213ENST00000439928 SYNJ1O43426 1573 aa20.42■□□□□ 0.86
SPATA13-213ENST00000439928 BIVM-ERCC5R4GMW8 1640 aa20.41■□□□□ 0.86
SPATA13-213ENST00000439928 TOP2BQ02880 1626 aa20.38■□□□□ 0.85
SPATA13-213ENST00000439928 CUX1P39880 1505 aa20.34■□□□□ 0.85
SPATA13-213ENST00000439928 ERCC6Q03468 1493 aa20.34■□□□□ 0.85
SPATA13-213ENST00000439928 DNMBPQ6XZF7 1577 aa20.32■□□□□ 0.84
SPATA13-213ENST00000439928 TOPBP1Q92547 1522 aa20.26■□□□□ 0.83
SPATA13-213ENST00000439928 MRC2Q9UBG0 1479 aa20.25■□□□□ 0.83
SPATA13-213ENST00000439928 URB2Q14146 1524 aaKnown RBP20.24■□□□□ 0.83
SPATA13-213ENST00000439928 THOC2Q8NI27 1593 aaKnown RBP20.21■□□□□ 0.83
SPATA13-213ENST00000439928 FGD5Q6ZNL6 1462 aa20.18■□□□□ 0.82
SPATA13-213ENST00000439928 WDR62O43379 1518 aa20.18■□□□□ 0.82
SPATA13-213ENST00000439928 POLA1P09884 1462 aaPredicted RBP20.12■□□□□ 0.81
SPATA13-213ENST00000439928 WDR97A6NE52 1622 aa20.07■□□□□ 0.8
SPATA13-213ENST00000439928 SOGA1O94964 1423 aa20.04■□□□□ 0.8
SPATA13-213ENST00000439928 EEA1Q15075 1411 aa20.04■□□□□ 0.8
SPATA13-213ENST00000439928 RAD54L2Q9Y4B4 1467 aa20.02■□□□□ 0.79
SPATA13-213ENST00000439928 TARBP1Q13395 1621 aaKnown RBP20.01■□□□□ 0.79
SPATA13-213ENST00000439928 ABCA10Q8WWZ4 1543 aa20■□□□□ 0.79
SPATA13-213ENST00000439928 FAM9AQ8IZU1 332 aaPredicted RBP20■□□□□ 0.79
SPATA13-213ENST00000439928 KIF27Q86VH2 1401 aa19.99■□□□□ 0.79
SPATA13-213ENST00000439928 CUX2O14529 1486 aa19.99■□□□□ 0.79
SPATA13-213ENST00000439928 RUSC2Q8N2Y8 1516 aa19.98■□□□□ 0.79
SPATA13-213ENST00000439928 IFT140Q96RY7 1462 aa19.95■□□□□ 0.78
SPATA13-213ENST00000439928 ABCA5Q8WWZ7 1642 aa19.92■□□□□ 0.78
SPATA13-213ENST00000439928 PBRM1Q86U86 1689 aa19.89■□□□□ 0.77
SPATA13-213ENST00000439928 CSRNP3Q8WYN3 585 aa19.87■□□□□ 0.77
SPATA13-213ENST00000439928 AEBP2Q6ZN18 517 aaPredicted RBP19.85■□□□□ 0.77
SPATA13-213ENST00000439928 EIF4G3O43432 1585 aaKnown RBP19.85■□□□□ 0.77
SPATA13-213ENST00000439928 GAPVD1Q14C86 1478 aa19.84■□□□□ 0.77
SPATA13-213ENST00000439928 KIF21BO75037 1637 aa19.83■□□□□ 0.77
SPATA13-213ENST00000439928 TDRD9Q8NDG6 1382 aaKnown RBP19.83■□□□□ 0.76
SPATA13-213ENST00000439928 CUL7Q14999 1698 aa19.82■□□□□ 0.76
SPATA13-213ENST00000439928 ZNF608Q9ULD9 1512 aaPredicted RBP19.81■□□□□ 0.76
SPATA13-213ENST00000439928 ERICH3Q5RHP9 1530 aa19.8■□□□□ 0.76
SPATA13-213ENST00000439928 AQRO60306 1485 aaKnown RBP eCLIP19.77■□□□□ 0.76
SPATA13-213ENST00000439928 IGF1RP08069 1367 aa19.75■□□□□ 0.75
SPATA13-213ENST00000439928 GOLGA3Q08378 1498 aa19.74■□□□□ 0.75
SPATA13-213ENST00000439928 GRIN2BQ13224 1484 aa19.74■□□□□ 0.75
SPATA13-213ENST00000439928 PRXQ9BXM0 1461 aa19.73■□□□□ 0.75
SPATA13-213ENST00000439928 LOC105371045A0A1W2PR82 267 aa19.73■□□□□ 0.75
SPATA13-213ENST00000439928 EHMT2Q96KQ7 1210 aa19.72■□□□□ 0.75
SPATA13-213ENST00000439928 RAPGEF2Q9Y4G8 1499 aa19.68■□□□□ 0.74
SPATA13-213ENST00000439928 CARMIL1Q5VZK9 1371 aa19.68■□□□□ 0.74
SPATA13-213ENST00000439928 ADAMTS12P58397 1594 aa19.68■□□□□ 0.74
SPATA13-213ENST00000439928 SNAPC4Q5SXM2 1469 aa19.63■□□□□ 0.73
SPATA13-213ENST00000439928 MAGI1Q96QZ7 1491 aaPredicted RBP19.63■□□□□ 0.73
SPATA13-213ENST00000439928 UBTFP17480 764 aaKnown RBP19.62■□□□□ 0.73
SPATA13-213ENST00000439928 FHAD1B1AJZ9 1412 aa19.62■□□□□ 0.73
SPATA13-213ENST00000439928 CTTNBP2Q8WZ74 1663 aa19.61■□□□□ 0.73
SPATA13-213ENST00000439928 TNIKQ9UKE5 1360 aa19.56■□□□□ 0.72
SPATA13-213ENST00000439928 SYNJ2O15056 1496 aa19.54■□□□□ 0.72
SPATA13-213ENST00000439928 CHD1O14646 1710 aa19.53■□□□□ 0.72
SPATA13-213ENST00000439928 GRIN2AQ12879 1464 aa19.5■□□□□ 0.71
SPATA13-213ENST00000439928 CHMP7Q8WUX9 453 aaPredicted RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms