RNA–Protein interactions for RNA: ENST00000395834.5

CDKL1-203, Transcript of cyclin dependent kinase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL1, Length 1,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1-203ENST00000395834 NISCHQ9Y2I1 1504 aa27.72■■■□□ 2.03
CDKL1-203ENST00000395834 CCDC180Q9P1Z9 1646 aa24.36■■□□□ 1.49
CDKL1-203ENST00000395834 ABCC9O60706 1549 aa23.52■■□□□ 1.36
CDKL1-203ENST00000395834 ZCCHC6Q5VYS8 1495 aaKnown RBP23.26■■□□□ 1.31
CDKL1-203ENST00000395834 DCAF8L2P0C7V8 631 aa22.95■■□□□ 1.26
CDKL1-203ENST00000395834 DCAF1Q9Y4B6 1507 aa22.95■■□□□ 1.26
CDKL1-203ENST00000395834 NACADO15069 1562 aa22.79■■□□□ 1.24
CDKL1-203ENST00000395834 MYO15BQ96JP2 1530 aa22.77■■□□□ 1.24
CDKL1-203ENST00000395834 RB1CC1Q8TDY2 1594 aa22.75■■□□□ 1.23
CDKL1-203ENST00000395834 SHROOM4Q9ULL8 1493 aa22.48■■□□□ 1.19
CDKL1-203ENST00000395834 UNC13AQ9UPW8 1703 aa22.43■■□□□ 1.18
CDKL1-203ENST00000395834 SCRIBQ14160 1630 aa22.27■■□□□ 1.16
CDKL1-203ENST00000395834 BICRAQ9NZM4 1560 aa22.17■■□□□ 1.14
CDKL1-203ENST00000395834 PABPN1Q86U42 306 aaKnown RBP eCLIP21.95■■□□□ 1.1
CDKL1-203ENST00000395834 SUPT5HO00267 1087 aaKnown RBP21.59■■□□□ 1.05
CDKL1-203ENST00000395834 EIF4G1Q04637 1599 aaKnown RBP21.51■■□□□ 1.03
CDKL1-203ENST00000395834 CECR2Q9BXF3 1484 aa21.51■■□□□ 1.03
CDKL1-203ENST00000395834 DNAJC5BQ9UF47 199 aa21.46■■□□□ 1.03
CDKL1-203ENST00000395834 BAZ1AQ9NRL2 1556 aaPredicted RBP21.45■■□□□ 1.02
CDKL1-203ENST00000395834 RSF1Q96T23 1441 aaPredicted RBP21.43■■□□□ 1.02
CDKL1-203ENST00000395834 MROH2BQ7Z745 1585 aa21.39■■□□□ 1.01
CDKL1-203ENST00000395834 CC2D2AQ9P2K1 1620 aa21.37■■□□□ 1.01
CDKL1-203ENST00000395834 SMARCA4P51532 1647 aa21.35■■□□□ 1.01
CDKL1-203ENST00000395834 WIZO95785 1651 aa21.21■□□□□ 0.99
CDKL1-203ENST00000395834 PEG3Q9GZU2 1588 aa21.1■□□□□ 0.97
CDKL1-203ENST00000395834 ATAD2BQ9ULI0 1458 aa21.06■□□□□ 0.96
CDKL1-203ENST00000395834 SMARCA2P51531 1590 aa21.06■□□□□ 0.96
CDKL1-203ENST00000395834 TOP2AP11388 1531 aaKnown RBP21.03■□□□□ 0.96
CDKL1-203ENST00000395834 NCAPD3P42695 1498 aa21.02■□□□□ 0.96
CDKL1-203ENST00000395834 HMGXB3Q12766 1538 aa20.97■□□□□ 0.95
CDKL1-203ENST00000395834 BAZ1BQ9UIG0 1483 aaKnown RBP20.93■□□□□ 0.94
CDKL1-203ENST00000395834 CCDC88BA6NC98 1476 aa20.78■□□□□ 0.92
CDKL1-203ENST00000395834 CHIC1Q5VXU3 224 aa20.57■□□□□ 0.88
CDKL1-203ENST00000395834 NESP48681 1621 aa20.47■□□□□ 0.87
CDKL1-203ENST00000395834 LAMC3Q9Y6N6 1575 aa20.45■□□□□ 0.86
CDKL1-203ENST00000395834 CFTRP13569 1480 aa20.37■□□□□ 0.85
CDKL1-203ENST00000395834 CADPSQ9ULU8 1353 aa20.37■□□□□ 0.85
CDKL1-203ENST00000395834 TRIM41Q8WV44 630 aa20.34■□□□□ 0.85
CDKL1-203ENST00000395834 PRDM2Q13029 1718 aa20.33■□□□□ 0.84
CDKL1-203ENST00000395834 KIF21AQ7Z4S6 1674 aa20.3■□□□□ 0.84
CDKL1-203ENST00000395834 ABCC8Q09428 1581 aa20.28■□□□□ 0.84
CDKL1-203ENST00000395834 WRNQ14191 1432 aaPredicted RBP eCLIP20.21■□□□□ 0.83
CDKL1-203ENST00000395834 PDS5BQ9NTI5 1447 aa20.21■□□□□ 0.83
CDKL1-203ENST00000395834 ERCC6Q03468 1493 aa20.2■□□□□ 0.82
CDKL1-203ENST00000395834 THOC2Q8NI27 1593 aaKnown RBP20.2■□□□□ 0.82
CDKL1-203ENST00000395834 FANCD2Q9BXW9 1451 aa20.15■□□□□ 0.82
CDKL1-203ENST00000395834 SYNJ1O43426 1573 aa20.1■□□□□ 0.81
CDKL1-203ENST00000395834 CEP164Q9UPV0 1460 aa20.09■□□□□ 0.81
CDKL1-203ENST00000395834 TOP2BQ02880 1626 aa20.06■□□□□ 0.8
CDKL1-203ENST00000395834 BIVM-ERCC5R4GMW8 1640 aa20.05■□□□□ 0.8
CDKL1-203ENST00000395834 MRC2Q9UBG0 1479 aa20.04■□□□□ 0.8
CDKL1-203ENST00000395834 WDR62O43379 1518 aa20.04■□□□□ 0.8
CDKL1-203ENST00000395834 CUX1P39880 1505 aa20.02■□□□□ 0.79
CDKL1-203ENST00000395834 CUX2O14529 1486 aa20.01■□□□□ 0.79
CDKL1-203ENST00000395834 URB2Q14146 1524 aaKnown RBP19.99■□□□□ 0.79
CDKL1-203ENST00000395834 FAM9AQ8IZU1 332 aaPredicted RBP19.93■□□□□ 0.78
CDKL1-203ENST00000395834 DNMBPQ6XZF7 1577 aa19.92■□□□□ 0.78
CDKL1-203ENST00000395834 EEA1Q15075 1411 aa19.89■□□□□ 0.77
CDKL1-203ENST00000395834 TOPBP1Q92547 1522 aa19.88■□□□□ 0.77
CDKL1-203ENST00000395834 SOGA1O94964 1423 aa19.87■□□□□ 0.77
CDKL1-203ENST00000395834 FGD5Q6ZNL6 1462 aa19.84■□□□□ 0.77
CDKL1-203ENST00000395834 RUSC2Q8N2Y8 1516 aa19.78■□□□□ 0.76
CDKL1-203ENST00000395834 POLA1P09884 1462 aaPredicted RBP19.76■□□□□ 0.75
CDKL1-203ENST00000395834 LOC105371045A0A1W2PR82 267 aa19.75■□□□□ 0.75
CDKL1-203ENST00000395834 CSRNP3Q8WYN3 585 aa19.75■□□□□ 0.75
CDKL1-203ENST00000395834 KIF27Q86VH2 1401 aa19.73■□□□□ 0.75
CDKL1-203ENST00000395834 TARBP1Q13395 1621 aaKnown RBP19.72■□□□□ 0.75
CDKL1-203ENST00000395834 IFT140Q96RY7 1462 aa19.67■□□□□ 0.74
CDKL1-203ENST00000395834 RAD54L2Q9Y4B4 1467 aa19.67■□□□□ 0.74
CDKL1-203ENST00000395834 ABCA10Q8WWZ4 1543 aa19.67■□□□□ 0.74
CDKL1-203ENST00000395834 WDR97A6NE52 1622 aa19.66■□□□□ 0.74
CDKL1-203ENST00000395834 EHMT2Q96KQ7 1210 aa19.62■□□□□ 0.73
CDKL1-203ENST00000395834 ZNF608Q9ULD9 1512 aaPredicted RBP19.61■□□□□ 0.73
CDKL1-203ENST00000395834 KIF21BO75037 1637 aa19.61■□□□□ 0.73
CDKL1-203ENST00000395834 GOLGA3Q08378 1498 aa19.59■□□□□ 0.73
CDKL1-203ENST00000395834 EIF4G3O43432 1585 aaKnown RBP19.58■□□□□ 0.73
CDKL1-203ENST00000395834 IGF1RP08069 1367 aa19.52■□□□□ 0.72
CDKL1-203ENST00000395834 PRXQ9BXM0 1461 aa19.52■□□□□ 0.72
CDKL1-203ENST00000395834 ABCA5Q8WWZ7 1642 aa19.52■□□□□ 0.71
CDKL1-203ENST00000395834 ERICH3Q5RHP9 1530 aa19.51■□□□□ 0.71
CDKL1-203ENST00000395834 TDRD9Q8NDG6 1382 aaKnown RBP19.5■□□□□ 0.71
CDKL1-203ENST00000395834 UBTFP17480 764 aaKnown RBP19.5■□□□□ 0.71
CDKL1-203ENST00000395834 GAPVD1Q14C86 1478 aa19.5■□□□□ 0.71
CDKL1-203ENST00000395834 RAPGEF2Q9Y4G8 1499 aa19.48■□□□□ 0.71
CDKL1-203ENST00000395834 TNIKQ9UKE5 1360 aa19.48■□□□□ 0.71
CDKL1-203ENST00000395834 AQRO60306 1485 aaKnown RBP eCLIP19.48■□□□□ 0.71
CDKL1-203ENST00000395834 CARMIL1Q5VZK9 1371 aa19.45■□□□□ 0.7
CDKL1-203ENST00000395834 CUL7Q14999 1698 aa19.45■□□□□ 0.7
CDKL1-203ENST00000395834 PBRM1Q86U86 1689 aa19.44■□□□□ 0.7
CDKL1-203ENST00000395834 GRIN2BQ13224 1484 aa19.38■□□□□ 0.69
CDKL1-203ENST00000395834 CEP162Q5TB80 1403 aa19.36■□□□□ 0.69
CDKL1-203ENST00000395834 SNAPC4Q5SXM2 1469 aa19.32■□□□□ 0.68
CDKL1-203ENST00000395834 CHD1O14646 1710 aa19.32■□□□□ 0.68
CDKL1-203ENST00000395834 MAGI1Q96QZ7 1491 aaPredicted RBP19.3■□□□□ 0.68
CDKL1-203ENST00000395834 FHAD1B1AJZ9 1412 aa19.29■□□□□ 0.68
CDKL1-203ENST00000395834 ADAMTS12P58397 1594 aa19.28■□□□□ 0.68
CDKL1-203ENST00000395834 CLIP1P30622 1438 aa19.26■□□□□ 0.67
CDKL1-203ENST00000395834 SYNJ2O15056 1496 aa19.22■□□□□ 0.67
CDKL1-203ENST00000395834 CTTNBP2Q8WZ74 1663 aa19.2■□□□□ 0.66
CDKL1-203ENST00000395834 RANGAP1P46060 587 aaPredicted RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms