RNA–Protein interactions for RNA: ENST00000443427.5

ESR1-208, Transcript of estrogen receptor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ESR1, Length 6,357 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESR1-208ENST00000443427 DCAF8L2P0C7V8 631 aa20.21■□□□□ 0.83
ESR1-208ENST00000443427 NISCHQ9Y2I1 1504 aa19.45■□□□□ 0.7
ESR1-208ENST00000443427 SUPT5HO00267 1087 aaKnown RBP18.71■□□□□ 0.59
ESR1-208ENST00000443427 SHROOM4Q9ULL8 1493 aa18.49■□□□□ 0.55
ESR1-208ENST00000443427 FAM9AQ8IZU1 332 aaPredicted RBP18.12■□□□□ 0.49
ESR1-208ENST00000443427 EHMT2Q96KQ7 1210 aa17.98■□□□□ 0.47
ESR1-208ENST00000443427 APLP2Q06481 763 aa17.96■□□□□ 0.47
ESR1-208ENST00000443427 TRIM41Q8WV44 630 aa17.46■□□□□ 0.39
ESR1-208ENST00000443427 RANGAP1P46060 587 aaPredicted RBP17.43■□□□□ 0.38
ESR1-208ENST00000443427 ATP1B4Q9UN42 357 aaPredicted RBP17.42■□□□□ 0.38
ESR1-208ENST00000443427 TTBK1Q5TCY1 1321 aaPredicted RBP17.31■□□□□ 0.36
ESR1-208ENST00000443427 UBTFP17480 764 aaKnown RBP17.3■□□□□ 0.36
ESR1-208ENST00000443427 PELP1Q8IZL8 1130 aaKnown RBP17.16■□□□□ 0.34
ESR1-208ENST00000443427 ABCC9O60706 1549 aa17.11■□□□□ 0.33
ESR1-208ENST00000443427 PCGF6Q9BYE7 350 aa17.01■□□□□ 0.31
ESR1-208ENST00000443427 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.98■□□□□ 0.31
ESR1-208ENST00000443427 HNRNPUL2Q1KMD3 747 aaKnown RBP16.98■□□□□ 0.31
ESR1-208ENST00000443427 MYT1LQ9UL68 1186 aa16.98■□□□□ 0.31
ESR1-208ENST00000443427 PABPN1Q86U42 306 aaKnown RBP eCLIP16.94■□□□□ 0.3
ESR1-208ENST00000443427 CCER1Q8TC90 406 aaPredicted RBP16.88■□□□□ 0.29
ESR1-208ENST00000443427 ZEB1P37275 1124 aaPredicted RBP16.82■□□□□ 0.28
ESR1-208ENST00000443427 ITGAEP38570 1179 aa16.6■□□□□ 0.25
ESR1-208ENST00000443427 PPARGC1BQ86YN6 1023 aaKnown RBP16.57■□□□□ 0.24
ESR1-208ENST00000443427 CENPBP07199 599 aaPredicted RBP16.54■□□□□ 0.24
ESR1-208ENST00000443427 FBLN2P98095 1184 aa16.52■□□□□ 0.23
ESR1-208ENST00000443427 CHIC1Q5VXU3 224 aa16.47■□□□□ 0.23
ESR1-208ENST00000443427 TRIM26Q12899 539 aaPredicted RBP16.41■□□□□ 0.22
ESR1-208ENST00000443427 POLR3GLQ9BT43 218 aa16.4■□□□□ 0.22
ESR1-208ENST00000443427 NEFLP07196 543 aa16.39■□□□□ 0.21
ESR1-208ENST00000443427 LOC105371045A0A1W2PR82 267 aa16.33■□□□□ 0.21
ESR1-208ENST00000443427 ERICH6Q7L0X2 663 aa16.3■□□□□ 0.2
ESR1-208ENST00000443427 FAM50AQ14320 339 aaKnown RBP16.3■□□□□ 0.2
ESR1-208ENST00000443427 SLC4A1APQ9BWU0 796 aaKnown RBP16.29■□□□□ 0.2
ESR1-208ENST00000443427 SCRIBQ14160 1630 aa16.24■□□□□ 0.19
ESR1-208ENST00000443427 TRIM52Q96A61 297 aa16.23■□□□□ 0.19
ESR1-208ENST00000443427 MYT1Q01538 1121 aa16.2■□□□□ 0.18
ESR1-208ENST00000443427 YTHDC1Q96MU7 727 aaKnown RBP16.16■□□□□ 0.18
ESR1-208ENST00000443427 NPM1P06748 294 aaKnown RBP eCLIP16.13■□□□□ 0.17
ESR1-208ENST00000443427 CDK11AQ9UQ88 783 aaPredicted RBP16.13■□□□□ 0.17
ESR1-208ENST00000443427 CCDC180Q9P1Z9 1646 aa16.1■□□□□ 0.17
ESR1-208ENST00000443427 CNGB1Q14028 1251 aaPredicted RBP16.09■□□□□ 0.17
ESR1-208ENST00000443427 ESF1Q9H501 851 aaKnown RBP16.07■□□□□ 0.16
ESR1-208ENST00000443427 P3H3Q8IVL6 736 aa16.05■□□□□ 0.16
ESR1-208ENST00000443427 CSRNP3Q8WYN3 585 aa16.05■□□□□ 0.16
ESR1-208ENST00000443427 RB1CC1Q8TDY2 1594 aa16.04■□□□□ 0.16
ESR1-208ENST00000443427 BCANQ96GW7 911 aa16.04■□□□□ 0.16
ESR1-208ENST00000443427 ZCCHC6Q5VYS8 1495 aaKnown RBP16.03■□□□□ 0.16
ESR1-208ENST00000443427 ARID3CA6NKF2 412 aa16.02■□□□□ 0.16
ESR1-208ENST00000443427 ZNF777Q9ULD5 760 aaPredicted RBP15.97■□□□□ 0.15
ESR1-208ENST00000443427 ZNF326Q5BKZ1 582 aaKnown RBP15.95■□□□□ 0.14
ESR1-208ENST00000443427 NEUROD1Q13562 356 aa15.94■□□□□ 0.14
ESR1-208ENST00000443427 DAXXQ9UER7 740 aaPredicted RBP15.91■□□□□ 0.14
ESR1-208ENST00000443427 HRCP23327 699 aa15.9■□□□□ 0.14
ESR1-208ENST00000443427 CHMP7Q8WUX9 453 aaPredicted RBP15.89■□□□□ 0.13
ESR1-208ENST00000443427 STAG3Q9UJ98 1225 aa15.85■□□□□ 0.13
ESR1-208ENST00000443427 NACADO15069 1562 aa15.82■□□□□ 0.12
ESR1-208ENST00000443427 NEFMP07197 916 aa15.79■□□□□ 0.12
ESR1-208ENST00000443427 PLPPR3Q6T4P5 718 aa15.76■□□□□ 0.11
ESR1-208ENST00000443427 CHGAP10645 457 aaKnown RBP15.74■□□□□ 0.11
ESR1-208ENST00000443427 CLSPNQ9HAW4 1339 aa15.72■□□□□ 0.11
ESR1-208ENST00000443427 SLC24A1O60721 1099 aa15.72■□□□□ 0.11
ESR1-208ENST00000443427 ZBTB47Q9UFB7 747 aaPredicted RBP15.68■□□□□ 0.1
ESR1-208ENST00000443427 ANP32CO43423 234 aa15.68■□□□□ 0.1
ESR1-208ENST00000443427 TSPY4P0CV99 314 aa15.67■□□□□ 0.1
ESR1-208ENST00000443427 TSPY10P0CW01 314 aa15.67■□□□□ 0.1
ESR1-208ENST00000443427 ERCC6Q03468 1493 aa15.67■□□□□ 0.1
ESR1-208ENST00000443427 BAZ1BQ9UIG0 1483 aaKnown RBP15.66■□□□□ 0.1
ESR1-208ENST00000443427 DIEXFQ68CQ4 756 aaKnown RBP15.64■□□□□ 0.09
ESR1-208ENST00000443427 MTUS2Q5JR59 1369 aa15.59■□□□□ 0.09
ESR1-208ENST00000443427 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.59■□□□□ 0.09
ESR1-208ENST00000443427 PLEKHD1A6NEE1 506 aa15.56■□□□□ 0.08
ESR1-208ENST00000443427 KCNH8Q96L42 1107 aa15.54■□□□□ 0.08
ESR1-208ENST00000443427 CANXP27824 592 aaKnown RBP15.53■□□□□ 0.08
ESR1-208ENST00000443427 TONSLQ96HA7 1378 aa15.52■□□□□ 0.08
ESR1-208ENST00000443427 CHIC2Q9UKJ5 165 aa15.51■□□□□ 0.07
ESR1-208ENST00000443427 ZNF316A6NFI3 1004 aaPredicted RBP15.5■□□□□ 0.07
ESR1-208ENST00000443427 RSF1Q96T23 1441 aaPredicted RBP15.47■□□□□ 0.07
ESR1-208ENST00000443427 ARID4BQ4LE39 1312 aaPredicted RBP15.46■□□□□ 0.07
ESR1-208ENST00000443427 EEA1Q15075 1411 aa15.46■□□□□ 0.06
ESR1-208ENST00000443427 KIF27Q86VH2 1401 aa15.44■□□□□ 0.06
ESR1-208ENST00000443427 WRNQ14191 1432 aaPredicted RBP eCLIP15.44■□□□□ 0.06
ESR1-208ENST00000443427 PPP1R15AO75807 674 aaPredicted RBP15.44■□□□□ 0.06
ESR1-208ENST00000443427 BAZ1AQ9NRL2 1556 aaPredicted RBP15.43■□□□□ 0.06
ESR1-208ENST00000443427 CLIP1P30622 1438 aa15.41■□□□□ 0.06
ESR1-208ENST00000443427 ACIN1Q9UKV3 1341 aaKnown RBP15.4■□□□□ 0.06
ESR1-208ENST00000443427 SCAF1Q9H7N4 1312 aaKnown RBP15.38■□□□□ 0.05
ESR1-208ENST00000443427 C14orf37Q86TY3 774 aa15.37■□□□□ 0.05
ESR1-208ENST00000443427 TRHP20396 242 aaPredicted RBP15.36■□□□□ 0.05
ESR1-208ENST00000443427 DCAF1Q9Y4B6 1507 aa15.36■□□□□ 0.05
ESR1-208ENST00000443427 BCL11AQ9H165 835 aa15.34■□□□□ 0.05
ESR1-208ENST00000443427 CFDP1Q9UEE9 299 aaPredicted RBP15.34■□□□□ 0.05
ESR1-208ENST00000443427 GOLGA3Q08378 1498 aa15.34■□□□□ 0.05
ESR1-208ENST00000443427 KDM2AQ9Y2K7 1162 aa15.33■□□□□ 0.04
ESR1-208ENST00000443427 PDS5BQ9NTI5 1447 aa15.3■□□□□ 0.04
ESR1-208ENST00000443427 RRP7BPQ9NSQ0 103 aa15.27■□□□□ 0.04
ESR1-208ENST00000443427 RTL5Q5HYW3 569 aaPredicted RBP15.27■□□□□ 0.04
ESR1-208ENST00000443427 NPM2Q86SE8 214 aaKnown RBP15.26■□□□□ 0.03
ESR1-208ENST00000443427 HAP1P54257 671 aaPredicted RBP15.24■□□□□ 0.03
ESR1-208ENST00000443427 A0A0G2JS52 829 aa15.23■□□□□ 0.03
ESR1-208ENST00000443427 CEP164Q9UPV0 1460 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 148.3 ms