RNA–Protein interactions for RNA: ENST00000349999.8

HFE-204, Transcript of homeostatic iron regulator, humanhuman

TSL 1 (best) BASIC

Gene HFE, Length 1,704 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFE-204ENST00000349999 NISCHQ9Y2I1 1504 aa29.45■■■□□ 2.31
HFE-204ENST00000349999 ABCC9O60706 1549 aa26.37■■□□□ 1.81
HFE-204ENST00000349999 CCDC180Q9P1Z9 1646 aa26.33■■□□□ 1.81
HFE-204ENST00000349999 RB1CC1Q8TDY2 1594 aa25.05■■□□□ 1.6
HFE-204ENST00000349999 NACADO15069 1562 aa24.89■■□□□ 1.58
HFE-204ENST00000349999 DNAJC5BQ9UF47 199 aa24.88■■□□□ 1.57
HFE-204ENST00000349999 DCAF8L2P0C7V8 631 aa24.86■■□□□ 1.57
HFE-204ENST00000349999 PABPN1Q86U42 306 aaKnown RBP eCLIP24.61■■□□□ 1.53
HFE-204ENST00000349999 UNC13AQ9UPW8 1703 aa24.57■■□□□ 1.52
HFE-204ENST00000349999 MYO15BQ96JP2 1530 aa24.56■■□□□ 1.52
HFE-204ENST00000349999 ZCCHC6Q5VYS8 1495 aaKnown RBP24.42■■□□□ 1.5
HFE-204ENST00000349999 BICRAQ9NZM4 1560 aa24.41■■□□□ 1.5
HFE-204ENST00000349999 DCAF1Q9Y4B6 1507 aa24.29■■□□□ 1.48
HFE-204ENST00000349999 SCRIBQ14160 1630 aa24.08■■□□□ 1.45
HFE-204ENST00000349999 SHROOM4Q9ULL8 1493 aa23.94■■□□□ 1.42
HFE-204ENST00000349999 CC2D2AQ9P2K1 1620 aa23.81■■□□□ 1.4
HFE-204ENST00000349999 EIF4G1Q04637 1599 aaKnown RBP23.77■■□□□ 1.4
HFE-204ENST00000349999 CECR2Q9BXF3 1484 aa23.72■■□□□ 1.39
HFE-204ENST00000349999 DNAJC5Q9H3Z4 198 aa23.2■■□□□ 1.3
HFE-204ENST00000349999 NCAPD3P42695 1498 aa23.01■■□□□ 1.27
HFE-204ENST00000349999 ATAD2BQ9ULI0 1458 aa22.98■■□□□ 1.27
HFE-204ENST00000349999 SMARCA4P51532 1647 aa22.95■■□□□ 1.27
HFE-204ENST00000349999 SMARCA2P51531 1590 aa22.85■■□□□ 1.25
HFE-204ENST00000349999 HMGXB3Q12766 1538 aa22.82■■□□□ 1.24
HFE-204ENST00000349999 BAZ1AQ9NRL2 1556 aaPredicted RBP22.81■■□□□ 1.24
HFE-204ENST00000349999 CUX2O14529 1486 aa22.74■■□□□ 1.23
HFE-204ENST00000349999 MROH2BQ7Z745 1585 aa22.74■■□□□ 1.23
HFE-204ENST00000349999 BAZ1BQ9UIG0 1483 aaKnown RBP22.72■■□□□ 1.23
HFE-204ENST00000349999 PEG3Q9GZU2 1588 aa22.71■■□□□ 1.23
HFE-204ENST00000349999 NESP48681 1621 aa22.71■■□□□ 1.23
HFE-204ENST00000349999 ERCC6Q03468 1493 aa22.69■■□□□ 1.22
HFE-204ENST00000349999 WIZO95785 1651 aa22.47■■□□□ 1.19
HFE-204ENST00000349999 LAMC3Q9Y6N6 1575 aa22.46■■□□□ 1.19
HFE-204ENST00000349999 THOC2Q8NI27 1593 aaKnown RBP22.41■■□□□ 1.18
HFE-204ENST00000349999 KIF21AQ7Z4S6 1674 aa22.37■■□□□ 1.17
HFE-204ENST00000349999 CADPSQ9ULU8 1353 aa22.32■■□□□ 1.16
HFE-204ENST00000349999 PDS5BQ9NTI5 1447 aa22.32■■□□□ 1.16
HFE-204ENST00000349999 RSF1Q96T23 1441 aaPredicted RBP22.28■■□□□ 1.16
HFE-204ENST00000349999 MRC2Q9UBG0 1479 aa22.14■■□□□ 1.14
HFE-204ENST00000349999 TOP2AP11388 1531 aaKnown RBP22.13■■□□□ 1.13
HFE-204ENST00000349999 WDR62O43379 1518 aa22.1■■□□□ 1.13
HFE-204ENST00000349999 CFTRP13569 1480 aa22.09■■□□□ 1.13
HFE-204ENST00000349999 FANCD2Q9BXW9 1451 aa22.07■■□□□ 1.12
HFE-204ENST00000349999 CEP164Q9UPV0 1460 aa22.06■■□□□ 1.12
HFE-204ENST00000349999 TRIM41Q8WV44 630 aa21.94■■□□□ 1.1
HFE-204ENST00000349999 CCDC88BA6NC98 1476 aa21.93■■□□□ 1.1
HFE-204ENST00000349999 URB2Q14146 1524 aaKnown RBP21.93■■□□□ 1.1
HFE-204ENST00000349999 PRDM2Q13029 1718 aa21.83■■□□□ 1.08
HFE-204ENST00000349999 SUPT5HO00267 1087 aaKnown RBP21.68■■□□□ 1.06
HFE-204ENST00000349999 TOPBP1Q92547 1522 aa21.67■■□□□ 1.06
HFE-204ENST00000349999 ZNF608Q9ULD9 1512 aaPredicted RBP21.67■■□□□ 1.06
HFE-204ENST00000349999 OSCARQ8IYS5 282 aa21.63■■□□□ 1.05
HFE-204ENST00000349999 IFT140Q96RY7 1462 aa21.61■■□□□ 1.05
HFE-204ENST00000349999 DNMBPQ6XZF7 1577 aa21.57■■□□□ 1.04
HFE-204ENST00000349999 ABCC8Q09428 1581 aa21.55■■□□□ 1.04
HFE-204ENST00000349999 EIF4G3O43432 1585 aaKnown RBP21.49■■□□□ 1.03
HFE-204ENST00000349999 TARBP1Q13395 1621 aaKnown RBP21.49■■□□□ 1.03
HFE-204ENST00000349999 AQRO60306 1485 aaKnown RBP eCLIP21.46■■□□□ 1.03
HFE-204ENST00000349999 POLA1P09884 1462 aaPredicted RBP21.45■■□□□ 1.03
HFE-204ENST00000349999 RAD54L2Q9Y4B4 1467 aa21.42■■□□□ 1.02
HFE-204ENST00000349999 RIMBP3CA6NJZ7 1639 aa21.38■■□□□ 1.01
HFE-204ENST00000349999 RIMBP3BA6NNM3 1639 aa21.38■■□□□ 1.01
HFE-204ENST00000349999 RIMBP3Q9UFD9 1639 aa21.38■■□□□ 1.01
HFE-204ENST00000349999 SOGA1O94964 1423 aa21.35■■□□□ 1.01
HFE-204ENST00000349999 CUX1P39880 1505 aa21.35■■□□□ 1.01
HFE-204ENST00000349999 TDRD9Q8NDG6 1382 aaKnown RBP21.34■■□□□ 1.01
HFE-204ENST00000349999 CHD1O14646 1710 aa21.33■■□□□ 1
HFE-204ENST00000349999 FGD5Q6ZNL6 1462 aa21.33■■□□□ 1
HFE-204ENST00000349999 ARHGEF11O15085 1522 aa21.31■■□□□ 1
HFE-204ENST00000349999 FBLN2P98095 1184 aa21.27■■□□□ 1
HFE-204ENST00000349999 SNAPC4Q5SXM2 1469 aa21.22■□□□□ 0.99
HFE-204ENST00000349999 CYB5RLQ6IPT4 315 aa21.17■□□□□ 0.98
HFE-204ENST00000349999 WDR97A6NE52 1622 aa21.17■□□□□ 0.98
HFE-204ENST00000349999 GRIN2BQ13224 1484 aa21.14■□□□□ 0.97
HFE-204ENST00000349999 ARAP1Q96P48 1450 aa21.12■□□□□ 0.97
HFE-204ENST00000349999 CHMP7Q8WUX9 453 aaPredicted RBP21.11■□□□□ 0.97
HFE-204ENST00000349999 MAGI1Q96QZ7 1491 aaPredicted RBP21.11■□□□□ 0.97
HFE-204ENST00000349999 GAPVD1Q14C86 1478 aa21.09■□□□□ 0.97
HFE-204ENST00000349999 CLASP1Q7Z460 1538 aa21.08■□□□□ 0.97
HFE-204ENST00000349999 ABCA10Q8WWZ4 1543 aa21.07■□□□□ 0.96
HFE-204ENST00000349999 PBRM1Q86U86 1689 aa21.07■□□□□ 0.96
HFE-204ENST00000349999 SYNJ2O15056 1496 aa21.06■□□□□ 0.96
HFE-204ENST00000349999 ABCA5Q8WWZ7 1642 aa21.05■□□□□ 0.96
HFE-204ENST00000349999 SYNJ1O43426 1573 aa21.03■□□□□ 0.96
HFE-204ENST00000349999 TRHP20396 242 aaPredicted RBP20.99■□□□□ 0.95
HFE-204ENST00000349999 TOP2BQ02880 1626 aa20.98■□□□□ 0.95
HFE-204ENST00000349999 WRNQ14191 1432 aaPredicted RBP eCLIP20.98■□□□□ 0.95
HFE-204ENST00000349999 BIVM-ERCC5R4GMW8 1640 aa20.98■□□□□ 0.95
HFE-204ENST00000349999 ADAMTS12P58397 1594 aa20.88■□□□□ 0.93
HFE-204ENST00000349999 GRIN2AQ12879 1464 aa20.88■□□□□ 0.93
HFE-204ENST00000349999 CEP170Q5SW79 1584 aa20.83■□□□□ 0.92
HFE-204ENST00000349999 ERCC6L2Q5T890 1561 aa20.83■□□□□ 0.92
HFE-204ENST00000349999 NUP160Q12769 1436 aa20.81■□□□□ 0.92
HFE-204ENST00000349999 FHAD1B1AJZ9 1412 aa20.81■□□□□ 0.92
HFE-204ENST00000349999 ERICH3Q5RHP9 1530 aa20.79■□□□□ 0.92
HFE-204ENST00000349999 CHIC1Q5VXU3 224 aa20.73■□□□□ 0.91
HFE-204ENST00000349999 AEBP2Q6ZN18 517 aaPredicted RBP20.72■□□□□ 0.91
HFE-204ENST00000349999 SHROOM2Q13796 1616 aa20.71■□□□□ 0.91
HFE-204ENST00000349999 JPH4Q96JJ6 628 aa20.61■□□□□ 0.89
HFE-204ENST00000349999 PRG4Q92954 1404 aaPredicted RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms