Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 UBR4-202ENST00000375224 3475 ntTSL 2 BASIC9.74□□□□□ -0.858e-6■■□□□ 12.6
XRCC6P12956 DDX27-203ENST00000471144 3639 ntTSL 1 (best)9.73□□□□□ -0.858e-6■■□□□ 12.6
XRCC6P12956 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.868e-6■■□□□ 12.6
XRCC6P12956 LPCAT4-207ENST00000567507 672 ntTSL 39.68□□□□□ -0.868e-6■■□□□ 12.6
XRCC6P12956 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.938e-6■■□□□ 12.6
XRCC6P12956 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.938e-6■■□□□ 12.6
XRCC6P12956 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.988e-6■■□□□ 12.6
XRCC6P12956 RPL4P4-201ENST00000422486 1284 ntBASIC8.72□□□□□ -1.018e-6■■□□□ 12.6
XRCC6P12956 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC8.18□□□□□ -1.18e-6■■□□□ 12.6
XRCC6P12956 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC8□□□□□ -1.132e-7■■□□□ 12.6
XRCC6P12956 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC7.64□□□□□ -1.192e-7■■□□□ 12.6
XRCC6P12956 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC7.42□□□□□ -1.223e-10■■□□□ 12.6
XRCC6P12956 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC7.32□□□□□ -1.243e-10■■□□□ 12.6
XRCC6P12956 CYTOR-214ENST00000629257 323 ntTSL 56.96□□□□□ -1.32e-7■■□□□ 12.6
XRCC6P12956 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.348e-6■■□□□ 12.6
XRCC6P12956 HOXB3-213ENST00000552000 466 ntTSL 35.83□□□□□ -1.488e-6■■□□□ 12.6
XRCC6P12956 CYTOR-203ENST00000409139 519 ntTSL 35.27□□□□□ -1.572e-7■■□□□ 12.6
XRCC6P12956 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.833e-10■■□□□ 12.6
XRCC6P12956 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.78■■□□□ 1.084e-9■■□□□ 12.6
XRCC6P12956 GIPR-203ENST00000585889 1414 ntTSL 1 (best)21.18■□□□□ 0.984e-9■■□□□ 12.6
XRCC6P12956 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.754e-9■■□□□ 12.6
XRCC6P12956 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.424e-9■■□□□ 12.6
XRCC6P12956 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.035e-6■■□□□ 12.5
XRCC6P12956 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC22.93■■□□□ 1.261e-6■■□□□ 12.5
XRCC6P12956 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.221e-6■■□□□ 12.5
XRCC6P12956 TMC6-224ENST00000593044 3070 ntTSL 219.96■□□□□ 0.791e-6■■□□□ 12.5
XRCC6P12956 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.571e-6■■□□□ 12.5
XRCC6P12956 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.631e-14■■□□□ 12.5
XRCC6P12956 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.87■□□□□ 0.771e-14■■□□□ 12.5
XRCC6P12956 UFD1-206ENST00000466373 3059 ntTSL 212.84□□□□□ -0.351e-14■■□□□ 12.5
XRCC6P12956 UFD1-205ENST00000459854 5038 ntTSL 1 (best)11.27□□□□□ -0.61e-14■■□□□ 12.5
XRCC6P12956 ZC3H3-201ENST00000262577 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.022e-7■■□□□ 12.4
XRCC6P12956 PRPF38B-201ENST00000370021 3728 ntTSL 1 (best) BASIC13.22□□□□□ -0.291e-12■■□□□ 12.4
XRCC6P12956 PRPF38B-203ENST00000370025 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.411e-12■■□□□ 12.4
XRCC6P12956 PRPF38B-205ENST00000485810 1352 ntTSL 24.6□□□□□ -1.672e-7■■□□□ 12.4
XRCC6P12956 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.281e-10■■□□□ 12.4
XRCC6P12956 ZNF316-202ENST00000427912 520 ntTSL 316.11■□□□□ 0.171e-10■■□□□ 12.4
XRCC6P12956 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC15.49■□□□□ 0.071e-10■■□□□ 12.4
XRCC6P12956 IMMT-207ENST00000449247 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.041e-10■■□□□ 12.4
XRCC6P12956 IMMT-202ENST00000409051 2515 ntTSL 2 BASIC14.45□□□□□ -0.11e-10■■□□□ 12.4
XRCC6P12956 IMMT-206ENST00000442664 2627 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.431e-10■■□□□ 12.4
XRCC6P12956 IMMT-201ENST00000254636 2613 ntTSL 5 BASIC9.75□□□□□ -0.851e-10■■□□□ 12.4
XRCC6P12956 IMMT-205ENST00000419070 2172 ntTSL 59.53□□□□□ -0.881e-10■■□□□ 12.4
XRCC6P12956 RBM39-204ENST00000374038 1026 ntTSL 517.5■□□□□ 0.393e-9■■□□□ 12.4
XRCC6P12956 RBM39-212ENST00000429968 2149 ntTSL 216.93■□□□□ 0.33e-9■■□□□ 12.4
XRCC6P12956 RBM39-216ENST00000444878 2124 ntTSL 216.27■□□□□ 0.193e-9■■□□□ 12.4
XRCC6P12956 RBM39-243ENST00000528062 2421 ntTSL 1 (best) BASIC16.23■□□□□ 0.193e-9■■□□□ 12.4
XRCC6P12956 RBM39-203ENST00000361162 2831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.113e-9■■□□□ 12.4
XRCC6P12956 RBM39-207ENST00000412738 1018 ntTSL 315.32■□□□□ 0.043e-9■■□□□ 12.4
XRCC6P12956 RBM39-202ENST00000338163 2792 ntTSL 215.09■□□□□ 0.013e-9■■□□□ 12.4
XRCC6P12956 RBM39-206ENST00000403542 2883 ntTSL 215.08■□□□□ 03e-9■■□□□ 12.4
XRCC6P12956 RBM39-245ENST00000639702 5914 ntTSL 513.63□□□□□ -0.233e-9■■□□□ 12.4
XRCC6P12956 RBM39-223ENST00000463004 4580 ntTSL 513.24□□□□□ -0.293e-9■■□□□ 12.4
XRCC6P12956 RBM39-236ENST00000490484 871 ntTSL 511.48□□□□□ -0.573e-9■■□□□ 12.4
XRCC6P12956 RBM39-237ENST00000492779 2316 ntTSL 28.34□□□□□ -1.083e-9■■□□□ 12.4
XRCC6P12956 RBM39-239ENST00000494274 704 ntTSL 38.06□□□□□ -1.123e-9■■□□□ 12.4
XRCC6P12956 RBM39-217ENST00000448303 1008 ntTSL 55.7□□□□□ -1.53e-9■■□□□ 12.4
XRCC6P12956 RBM39-221ENST00000461283 2415 ntTSL 53.96□□□□□ -1.783e-9■■□□□ 12.4
XRCC6P12956 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.783e-9■■□□□ 12.4
XRCC6P12956 DGCR8-209ENST00000495826 4695 ntTSL 1 (best)17.08■□□□□ 0.325e-6■■□□□ 12.4
XRCC6P12956 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.265e-6■■□□□ 12.4
XRCC6P12956 DGCR8-210ENST00000498171 3661 ntTSL 1 (best)15.12■□□□□ 0.015e-6■■□□□ 12.4
XRCC6P12956 DGCR8-203ENST00000407755 4129 ntTSL 1 (best) BASIC14.89□□□□□ -0.035e-6■■□□□ 12.4
XRCC6P12956 DGCR8-202ENST00000383024 4419 ntTSL 5 BASIC13.7□□□□□ -0.225e-6■■□□□ 12.4
XRCC6P12956 TFRC-204ENST00000421258 524 ntTSL 314.03□□□□□ -0.166e-8■■□□□ 12.4
XRCC6P12956 MT-TM-201ENST00000387377 68 ntBASIC-1.89□□□□□ -2.711e-323■■□□□ 12.4
XRCC6P12956 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.133e-6■■□□□ 12.3
XRCC6P12956 GOLGA3-201ENST00000204726 9252 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.193e-6■■□□□ 12.3
XRCC6P12956 GOLGA3-202ENST00000450791 8870 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.333e-6■■□□□ 12.3
XRCC6P12956 ZNF587-202ENST00000419854 5731 ntTSL 2 BASIC13.18□□□□□ -0.34e-6■■□□□ 12.3
XRCC6P12956 ZNF587-201ENST00000339656 6882 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.374e-6■■□□□ 12.3
XRCC6P12956 CBFA2T3-204ENST00000563640 664 ntTSL 217.34■□□□□ 0.371e-6■■□□□ 12.3
XRCC6P12956 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.754e-8■■□□□ 12.3
XRCC6P12956 TFRC-201ENST00000360110 5111 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.594e-8■■□□□ 12.3
XRCC6P12956 TFRC-203ENST00000420415 4814 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.014e-8■■□□□ 12.3
XRCC6P12956 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC33.7■■■□□ 2.992e-6■■□□□ 12.3
XRCC6P12956 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC31.96■■■□□ 2.712e-6■■□□□ 12.3
XRCC6P12956 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC31.53■■■□□ 2.642e-6■■□□□ 12.3
XRCC6P12956 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.272e-6■■□□□ 12.3
XRCC6P12956 DTNBP1-211ENST00000515875 1306 ntTSL 528.98■■■□□ 2.232e-6■■□□□ 12.3
XRCC6P12956 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC28.23■■■□□ 2.112e-6■■□□□ 12.3
XRCC6P12956 WDR34-204ENST00000473486 714 ntTSL 227.97■■■□□ 2.072e-6■■□□□ 12.3
XRCC6P12956 RHBDL1-203ENST00000450775 1566 ntTSL 227.77■■■□□ 2.042e-6■■□□□ 12.3
XRCC6P12956 TBC1D20-203ENST00000461304 2024 ntTSL 1 (best)27.42■■□□□ 1.982e-6■■□□□ 12.3
XRCC6P12956 DTNBP1-208ENST00000511762 843 ntTSL 327.25■■□□□ 1.952e-6■■□□□ 12.3
XRCC6P12956 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC27.17■■□□□ 1.942e-6■■□□□ 12.3
XRCC6P12956 COMT-210ENST00000467943 546 ntTSL 226.98■■□□□ 1.912e-6■■□□□ 12.3
XRCC6P12956 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC26.5■■□□□ 1.832e-6■■□□□ 12.3
XRCC6P12956 DTNBP1-209ENST00000513680 1518 ntTSL 526.38■■□□□ 1.812e-6■■□□□ 12.3
XRCC6P12956 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.772e-6■■□□□ 12.3
XRCC6P12956 COMT-203ENST00000403184 2217 ntTSL 2 BASIC26.02■■□□□ 1.762e-6■■□□□ 12.3
XRCC6P12956 HAGHL-215ENST00000567696 2199 ntTSL 225.98■■□□□ 1.752e-6■■□□□ 12.3
XRCC6P12956 RAB10-204ENST00000495146 1292 ntTSL 525.54■■□□□ 1.682e-6■■□□□ 12.3
XRCC6P12956 RHBDL1-204ENST00000561556 796 ntTSL 325.38■■□□□ 1.652e-6■■□□□ 12.3
XRCC6P12956 BRF1-216ENST00000550208 1040 ntTSL 325.18■■□□□ 1.622e-6■■□□□ 12.3
XRCC6P12956 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC24.97■■□□□ 1.592e-6■■□□□ 12.3
XRCC6P12956 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC24.78■■□□□ 1.562e-6■■□□□ 12.3
XRCC6P12956 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC24.64■■□□□ 1.532e-6■■□□□ 12.3
XRCC6P12956 HAGHL-217ENST00000569143 564 ntTSL 423.03■■□□□ 1.282e-6■■□□□ 12.3
XRCC6P12956 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.22e-6■■□□□ 12.3
Retrieved 100 of 6,788 protein–RNA pairs in 48.9 ms