RNA–Protein interactions for RNA: ENST00000409898.2

CYTOR-204, cytoskeleton regulator RNA, humanhuman

TSL 5 BASIC

Gene CYTOR, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTOR-204ENST00000409898 AEBP2Q6ZN18 517 aaPredicted RBP24.76■■□□□ 1.55
CYTOR-204ENST00000409898 CHIC1Q5VXU3 224 aa23.56■■□□□ 1.36
CYTOR-204ENST00000409898 SENP3Q9H4L4 574 aaPredicted RBP21.23■□□□□ 0.99
CYTOR-204ENST00000409898 PHF23Q9BUL5 403 aaPredicted RBP20.92■□□□□ 0.94
CYTOR-204ENST00000409898 FOXD1Q16676 465 aa19.72■□□□□ 0.75
CYTOR-204ENST00000409898 POTEDQ86YR6 584 aa19.09■□□□□ 0.65
CYTOR-204ENST00000409898 PLPPR3Q6T4P5 718 aa18.86■□□□□ 0.61
CYTOR-204ENST00000409898 MSH5O43196 834 aa18.55■□□□□ 0.56
CYTOR-204ENST00000409898 PIAS4Q8N2W9 510 aaPredicted RBP18.45■□□□□ 0.54
CYTOR-204ENST00000409898 PPP6R1Q9UPN7 881 aa18.4■□□□□ 0.54
CYTOR-204ENST00000409898 ADRA2BP18089 450 aa18.35■□□□□ 0.53
CYTOR-204ENST00000409898 EHMT2Q96KQ7 1210 aa17.31■□□□□ 0.36
CYTOR-204ENST00000409898 SCAF1Q9H7N4 1312 aaKnown RBP16.93■□□□□ 0.3
CYTOR-204ENST00000409898 KCNA4P22459 653 aa16.85■□□□□ 0.29
CYTOR-204ENST00000409898 MAPK8IP2Q13387 824 aaPredicted RBP16.85■□□□□ 0.29
CYTOR-204ENST00000409898 DMRT2Q9Y5R5 561 aa16.8■□□□□ 0.28
CYTOR-204ENST00000409898 PPP4R3CPQ6ZMV5 832 aa16.49■□□□□ 0.23
CYTOR-204ENST00000409898 CSRNP3Q8WYN3 585 aa16.44■□□□□ 0.22
CYTOR-204ENST00000409898 SLC4A1APQ9BWU0 796 aaKnown RBP16.31■□□□□ 0.2
CYTOR-204ENST00000409898 SLC24A1O60721 1099 aa16.24■□□□□ 0.19
CYTOR-204ENST00000409898 CNKSR2Q8WXI2 1034 aa16.22■□□□□ 0.19
CYTOR-204ENST00000409898 CACNB1Q02641 598 aaPredicted RBP16.19■□□□□ 0.18
CYTOR-204ENST00000409898 HOXD11P31277 338 aaPredicted RBP16.18■□□□□ 0.18
CYTOR-204ENST00000409898 DCAF8L1A6NGE4 600 aa16.12■□□□□ 0.17
CYTOR-204ENST00000409898 RNF216Q9NWF9 866 aaPredicted RBP16.08■□□□□ 0.16
CYTOR-204ENST00000409898 NCBP3Q53F19 620 aaKnown RBP15.93■□□□□ 0.14
CYTOR-204ENST00000409898 RNF39Q9H2S5 420 aa15.78■□□□□ 0.12
CYTOR-204ENST00000409898 AMER1Q5JTC6 1135 aaPredicted RBP15.72■□□□□ 0.11
CYTOR-204ENST00000409898 RTN4Q9NQC3 1192 aaKnown RBP15.7■□□□□ 0.1
CYTOR-204ENST00000409898 DNAJC5BQ9UF47 199 aa15.7■□□□□ 0.1
CYTOR-204ENST00000409898 NPM3O75607 178 aaKnown RBP15.61■□□□□ 0.09
CYTOR-204ENST00000409898 C1QBPQ07021 282 aaKnown RBP15.59■□□□□ 0.09
CYTOR-204ENST00000409898 ZBTB22O15209 634 aa15.48■□□□□ 0.07
CYTOR-204ENST00000409898 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.44■□□□□ 0.06
CYTOR-204ENST00000409898 FOXD4L1Q9NU39 408 aa15.16■□□□□ 0.02
CYTOR-204ENST00000409898 U3KPZ7 1027 aaPredicted RBP15.06■□□□□ 0
CYTOR-204ENST00000409898 SLC4A2P04920 1241 aa14.89□□□□□ -0.03
CYTOR-204ENST00000409898 CAPN15O75808 1086 aa14.86□□□□□ -0.03
CYTOR-204ENST00000409898 FKBP8Q14318 412 aa14.86□□□□□ -0.03
CYTOR-204ENST00000409898 POTEHQ6S545 545 aa14.84□□□□□ -0.03
CYTOR-204ENST00000409898 SPINK5Q9NQ38 1064 aaPredicted RBP14.83□□□□□ -0.04
CYTOR-204ENST00000409898 APLP2Q06481 763 aa14.77□□□□□ -0.05
CYTOR-204ENST00000409898 DSG3P32926 999 aa14.76□□□□□ -0.05
CYTOR-204ENST00000409898 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.75□□□□□ -0.05
CYTOR-204ENST00000409898 HNRNPUL2Q1KMD3 747 aaKnown RBP14.75□□□□□ -0.05
CYTOR-204ENST00000409898 SAMD1Q6SPF0 538 aaPredicted RBP14.63□□□□□ -0.07
CYTOR-204ENST00000409898 ZNF219Q9P2Y4 722 aaPredicted RBP14.63□□□□□ -0.07
CYTOR-204ENST00000409898 TRHP20396 242 aaPredicted RBP14.61□□□□□ -0.07
CYTOR-204ENST00000409898 ATXN8OSP0DMR3 200 aa14.5□□□□□ -0.09
CYTOR-204ENST00000409898 MYCNP04198 464 aaPredicted RBP14.48□□□□□ -0.09
CYTOR-204ENST00000409898 ABCB7O75027 752 aa14.47□□□□□ -0.09
CYTOR-204ENST00000409898 PLCB2Q00722 1185 aa14.41□□□□□ -0.1
CYTOR-204ENST00000409898 BCANQ96GW7 911 aa14.33□□□□□ -0.12
CYTOR-204ENST00000409898 HAP1P54257 671 aaPredicted RBP14.29□□□□□ -0.12
CYTOR-204ENST00000409898 PRKCSHP14314 528 aaPredicted RBP14.28□□□□□ -0.12
CYTOR-204ENST00000409898 POLA2Q14181 598 aa14.22□□□□□ -0.13
CYTOR-204ENST00000409898 TAOK2Q9UL54 1235 aa14.19□□□□□ -0.14
CYTOR-204ENST00000409898 RBM42Q9BTD8 480 aaKnown RBP14.16□□□□□ -0.14
CYTOR-204ENST00000409898 DCAF8L2P0C7V8 631 aa14.06□□□□□ -0.16
CYTOR-204ENST00000409898 ATF5Q9Y2D1 282 aaPredicted RBP14.06□□□□□ -0.16
CYTOR-204ENST00000409898 VSIG10Q8N0Z9 540 aa14.05□□□□□ -0.16
CYTOR-204ENST00000409898 FBXO3Q9UK99 471 aa14□□□□□ -0.17
CYTOR-204ENST00000409898 ZBTB12Q9Y330 459 aaPredicted RBP14□□□□□ -0.17
CYTOR-204ENST00000409898 TPRNQ4KMQ1 711 aa13.98□□□□□ -0.17
CYTOR-204ENST00000409898 CHRDL2Q6WN34 429 aa13.8□□□□□ -0.2
CYTOR-204ENST00000409898 AKT1S1Q96B36 256 aa13.8□□□□□ -0.2
CYTOR-204ENST00000409898 VASPP50552 380 aaPredicted RBP13.74□□□□□ -0.21
CYTOR-204ENST00000409898 OSCARQ8IYS5 282 aa13.73□□□□□ -0.21
CYTOR-204ENST00000409898 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.73□□□□□ -0.21
CYTOR-204ENST00000409898 KDM2AQ9Y2K7 1162 aa13.7□□□□□ -0.22
CYTOR-204ENST00000409898 SPDYE4A6NLX3 237 aa13.64□□□□□ -0.23
CYTOR-204ENST00000409898 FBLN2P98095 1184 aa13.64□□□□□ -0.23
CYTOR-204ENST00000409898 REM2Q8IYK8 340 aaPredicted RBP13.64□□□□□ -0.23
CYTOR-204ENST00000409898 PKD2Q13563 968 aa13.63□□□□□ -0.23
CYTOR-204ENST00000409898 BBXQ8WY36 941 aaPredicted RBP13.63□□□□□ -0.23
CYTOR-204ENST00000409898 DAXXQ9UER7 740 aaPredicted RBP13.63□□□□□ -0.23
CYTOR-204ENST00000409898 IFNLR1Q8IU57 520 aaPredicted RBP13.62□□□□□ -0.23
CYTOR-204ENST00000409898 PAXIP1Q6ZW49 1069 aaPredicted RBP13.61□□□□□ -0.23
CYTOR-204ENST00000409898 SP7Q8TDD2 431 aaPredicted RBP13.59□□□□□ -0.23
CYTOR-204ENST00000409898 TIMELESSQ9UNS1 1208 aa13.59□□□□□ -0.23
CYTOR-204ENST00000409898 CFAP44Q96MT7 982 aa13.58□□□□□ -0.24
CYTOR-204ENST00000409898 TULP1O00294 542 aaPredicted RBP13.56□□□□□ -0.24
CYTOR-204ENST00000409898 ARXQ96QS3 562 aa13.54□□□□□ -0.24
CYTOR-204ENST00000409898 SPDYE2BA6NHP3 402 aa13.53□□□□□ -0.24
CYTOR-204ENST00000409898 SPDYE6P0CI01 402 aa13.53□□□□□ -0.24
CYTOR-204ENST00000409898 SPDYE2Q495Y8 402 aa13.53□□□□□ -0.24
CYTOR-204ENST00000409898 PROM2Q8N271 834 aa13.49□□□□□ -0.25
CYTOR-204ENST00000409898 PITPNM1O00562 1244 aa13.47□□□□□ -0.25
CYTOR-204ENST00000409898 ERICH6Q7L0X2 663 aa13.47□□□□□ -0.25
CYTOR-204ENST00000409898 PIP4P2Q8N4L2 257 aa13.45□□□□□ -0.26
CYTOR-204ENST00000409898 GTF3C3Q9Y5Q9 886 aa13.45□□□□□ -0.26
CYTOR-204ENST00000409898 MKRN4PQ13434 485 aaPredicted RBP13.43□□□□□ -0.26
CYTOR-204ENST00000409898 NBR1Q14596 966 aa13.42□□□□□ -0.26
CYTOR-204ENST00000409898 ECM2O94769 699 aaPredicted RBP13.41□□□□□ -0.26
CYTOR-204ENST00000409898 NPM1P06748 294 aaKnown RBP eCLIP13.41□□□□□ -0.26
CYTOR-204ENST00000409898 SPRYD3Q8NCJ5 442 aa13.41□□□□□ -0.26
CYTOR-204ENST00000409898 FXR2P51116 673 aaKnown RBP eCLIP13.39□□□□□ -0.27
CYTOR-204ENST00000409898 TSHZ2Q9NRE2 1034 aa13.39□□□□□ -0.27
CYTOR-204ENST00000409898 ZNF692Q9BU19 519 aaPredicted RBP13.36□□□□□ -0.27
CYTOR-204ENST00000409898 KLHL34Q8N239 644 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms