Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.6■■□□□ 1.85
PCDHB11Q9Y5F2 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PCDHB11Q9Y5F2 AL391121.1-201ENST00000607967 1349 ntBASIC26.59■■□□□ 1.85
PCDHB11Q9Y5F2 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PCDHB11Q9Y5F2 AL162393.1-201ENST00000437852 946 ntBASIC26.58■■□□□ 1.85
PCDHB11Q9Y5F2 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
PCDHB11Q9Y5F2 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
PCDHB11Q9Y5F2 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PCDHB11Q9Y5F2 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
PCDHB11Q9Y5F2 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PCDHB11Q9Y5F2 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
PCDHB11Q9Y5F2 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.55■■□□□ 1.84
PCDHB11Q9Y5F2 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
PCDHB11Q9Y5F2 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
PCDHB11Q9Y5F2 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
PCDHB11Q9Y5F2 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC26.52■■□□□ 1.84
PCDHB11Q9Y5F2 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PCDHB11Q9Y5F2 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
PCDHB11Q9Y5F2 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.51■■□□□ 1.83
PCDHB11Q9Y5F2 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
PCDHB11Q9Y5F2 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.5■■□□□ 1.83
PCDHB11Q9Y5F2 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC26.49■■□□□ 1.83
PCDHB11Q9Y5F2 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PCDHB11Q9Y5F2 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
PCDHB11Q9Y5F2 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PCDHB11Q9Y5F2 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.48■■□□□ 1.83
PCDHB11Q9Y5F2 HNRNPLP2-201ENST00000568980 1570 ntBASIC26.48■■□□□ 1.83
PCDHB11Q9Y5F2 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PCDHB11Q9Y5F2 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
PCDHB11Q9Y5F2 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
PCDHB11Q9Y5F2 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
PCDHB11Q9Y5F2 NRG1-221ENST00000614767 762 ntTSL 5 BASIC26.46■■□□□ 1.83
PCDHB11Q9Y5F2 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC26.46■■□□□ 1.83
PCDHB11Q9Y5F2 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
PCDHB11Q9Y5F2 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
PCDHB11Q9Y5F2 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
PCDHB11Q9Y5F2 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.44■■□□□ 1.82
PCDHB11Q9Y5F2 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PCDHB11Q9Y5F2 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
PCDHB11Q9Y5F2 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC26.43■■□□□ 1.82
PCDHB11Q9Y5F2 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC26.43■■□□□ 1.82
PCDHB11Q9Y5F2 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
PCDHB11Q9Y5F2 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
PCDHB11Q9Y5F2 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.42■■□□□ 1.82
PCDHB11Q9Y5F2 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
PCDHB11Q9Y5F2 MIR3665-201ENST00000578708 105 ntBASIC26.42■■□□□ 1.82
PCDHB11Q9Y5F2 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
PCDHB11Q9Y5F2 AC120057.4-201ENST00000624722 1615 ntBASIC26.4■■□□□ 1.82
PCDHB11Q9Y5F2 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
PCDHB11Q9Y5F2 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
PCDHB11Q9Y5F2 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC26.39■■□□□ 1.81
PCDHB11Q9Y5F2 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26.38■■□□□ 1.81
PCDHB11Q9Y5F2 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PCDHB11Q9Y5F2 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PCDHB11Q9Y5F2 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.37■■□□□ 1.81
PCDHB11Q9Y5F2 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC26.37■■□□□ 1.81
PCDHB11Q9Y5F2 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
PCDHB11Q9Y5F2 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
PCDHB11Q9Y5F2 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
PCDHB11Q9Y5F2 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHB11Q9Y5F2 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHB11Q9Y5F2 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHB11Q9Y5F2 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.32■■□□□ 1.8
PCDHB11Q9Y5F2 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC26.31■■□□□ 1.8
PCDHB11Q9Y5F2 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
PCDHB11Q9Y5F2 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PCDHB11Q9Y5F2 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
PCDHB11Q9Y5F2 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHB11Q9Y5F2 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
PCDHB11Q9Y5F2 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.28■■□□□ 1.8
PCDHB11Q9Y5F2 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHB11Q9Y5F2 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHB11Q9Y5F2 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC26.26■■□□□ 1.79
PCDHB11Q9Y5F2 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHB11Q9Y5F2 ABHD17AP4-201ENST00000411545 909 ntBASIC26.25■■□□□ 1.79
PCDHB11Q9Y5F2 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.25■■□□□ 1.79
PCDHB11Q9Y5F2 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.25■■□□□ 1.79
PCDHB11Q9Y5F2 WASH5P-204ENST00000632292 975 ntBASIC26.25■■□□□ 1.79
PCDHB11Q9Y5F2 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHB11Q9Y5F2 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHB11Q9Y5F2 MIR7108-201ENST00000614319 87 ntBASIC26.24■■□□□ 1.79
PCDHB11Q9Y5F2 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHB11Q9Y5F2 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHB11Q9Y5F2 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.23■■□□□ 1.79
PCDHB11Q9Y5F2 CHML-205ENST00000638160 705 ntTSL 3 BASIC26.23■■□□□ 1.79
PCDHB11Q9Y5F2 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHB11Q9Y5F2 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHB11Q9Y5F2 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
PCDHB11Q9Y5F2 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHB11Q9Y5F2 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHB11Q9Y5F2 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
PCDHB11Q9Y5F2 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
PCDHB11Q9Y5F2 AC044849.2-201ENST00000606596 710 ntBASIC26.2■■□□□ 1.78
PCDHB11Q9Y5F2 AC087741.3-201ENST00000624270 1347 ntBASIC26.19■■□□□ 1.78
PCDHB11Q9Y5F2 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHB11Q9Y5F2 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHB11Q9Y5F2 MIR762-201ENST00000390236 83 ntBASIC26.17■■□□□ 1.78
PCDHB11Q9Y5F2 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHB11Q9Y5F2 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.16■■□□□ 1.78
PCDHB11Q9Y5F2 AC005559.1-201ENST00000589661 871 ntBASIC26.16■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms