Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC26.49■■□□□ 1.83
LRIT1Q9P2V4 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
LRIT1Q9P2V4 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC26.47■■□□□ 1.83
LRIT1Q9P2V4 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.47■■□□□ 1.83
LRIT1Q9P2V4 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.46■■□□□ 1.83
LRIT1Q9P2V4 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
LRIT1Q9P2V4 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
LRIT1Q9P2V4 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
LRIT1Q9P2V4 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.43■■□□□ 1.82
LRIT1Q9P2V4 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
LRIT1Q9P2V4 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
LRIT1Q9P2V4 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC26.42■■□□□ 1.82
LRIT1Q9P2V4 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC26.41■■□□□ 1.82
LRIT1Q9P2V4 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
LRIT1Q9P2V4 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
LRIT1Q9P2V4 AC044849.2-201ENST00000606596 710 ntBASIC26.41■■□□□ 1.82
LRIT1Q9P2V4 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
LRIT1Q9P2V4 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.81
LRIT1Q9P2V4 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.38■■□□□ 1.81
LRIT1Q9P2V4 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
LRIT1Q9P2V4 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC26.37■■□□□ 1.81
LRIT1Q9P2V4 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
LRIT1Q9P2V4 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
LRIT1Q9P2V4 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
LRIT1Q9P2V4 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
LRIT1Q9P2V4 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
LRIT1Q9P2V4 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
LRIT1Q9P2V4 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
LRIT1Q9P2V4 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
LRIT1Q9P2V4 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
LRIT1Q9P2V4 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
LRIT1Q9P2V4 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
LRIT1Q9P2V4 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC26.34■■□□□ 1.81
LRIT1Q9P2V4 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC26.33■■□□□ 1.81
LRIT1Q9P2V4 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.33■■□□□ 1.81
LRIT1Q9P2V4 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
LRIT1Q9P2V4 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
LRIT1Q9P2V4 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
LRIT1Q9P2V4 ABHD17AP4-201ENST00000411545 909 ntBASIC26.32■■□□□ 1.8
LRIT1Q9P2V4 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
LRIT1Q9P2V4 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
LRIT1Q9P2V4 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.3■■□□□ 1.8
LRIT1Q9P2V4 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.29■■□□□ 1.8
LRIT1Q9P2V4 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
LRIT1Q9P2V4 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
LRIT1Q9P2V4 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
LRIT1Q9P2V4 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
LRIT1Q9P2V4 RPS2-209ENST00000529806 993 ntTSL 3 BASIC26.27■■□□□ 1.8
LRIT1Q9P2V4 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
LRIT1Q9P2V4 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
LRIT1Q9P2V4 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
LRIT1Q9P2V4 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.26■■□□□ 1.79
LRIT1Q9P2V4 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
LRIT1Q9P2V4 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
LRIT1Q9P2V4 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
LRIT1Q9P2V4 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
LRIT1Q9P2V4 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
LRIT1Q9P2V4 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
LRIT1Q9P2V4 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.24■■□□□ 1.79
LRIT1Q9P2V4 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
LRIT1Q9P2V4 MIR7108-201ENST00000614319 87 ntBASIC26.22■■□□□ 1.79
LRIT1Q9P2V4 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
LRIT1Q9P2V4 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
LRIT1Q9P2V4 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
LRIT1Q9P2V4 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.18■■□□□ 1.78
LRIT1Q9P2V4 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.18■■□□□ 1.78
LRIT1Q9P2V4 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
LRIT1Q9P2V4 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC26.17■■□□□ 1.78
LRIT1Q9P2V4 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
LRIT1Q9P2V4 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
LRIT1Q9P2V4 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
LRIT1Q9P2V4 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
LRIT1Q9P2V4 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
LRIT1Q9P2V4 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
LRIT1Q9P2V4 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.14■■□□□ 1.78
LRIT1Q9P2V4 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.14■■□□□ 1.78
LRIT1Q9P2V4 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
LRIT1Q9P2V4 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.14■■□□□ 1.77
LRIT1Q9P2V4 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
LRIT1Q9P2V4 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
LRIT1Q9P2V4 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.13■■□□□ 1.77
LRIT1Q9P2V4 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
LRIT1Q9P2V4 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
LRIT1Q9P2V4 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
LRIT1Q9P2V4 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC26.11■■□□□ 1.77
LRIT1Q9P2V4 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC26.11■■□□□ 1.77
LRIT1Q9P2V4 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.1■■□□□ 1.77
LRIT1Q9P2V4 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC26.1■■□□□ 1.77
LRIT1Q9P2V4 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.1■■□□□ 1.77
LRIT1Q9P2V4 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC26.1■■□□□ 1.77
LRIT1Q9P2V4 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
LRIT1Q9P2V4 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
LRIT1Q9P2V4 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
LRIT1Q9P2V4 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC26.07■■□□□ 1.76
LRIT1Q9P2V4 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
LRIT1Q9P2V4 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
LRIT1Q9P2V4 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC26.06■■□□□ 1.76
LRIT1Q9P2V4 ZNRF2P2-203ENST00000454624 420 ntBASIC26.06■■□□□ 1.76
LRIT1Q9P2V4 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.06■■□□□ 1.76
LRIT1Q9P2V4 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms