Protein–RNA interactions for Protein: Q9H4S2

GSX1, GS homeobox 1, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSX1Q9H4S2 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
GSX1Q9H4S2 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
GSX1Q9H4S2 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
GSX1Q9H4S2 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
GSX1Q9H4S2 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
GSX1Q9H4S2 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
GSX1Q9H4S2 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
GSX1Q9H4S2 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.08■■□□□ 1.29
GSX1Q9H4S2 HSD17B1P1-201ENST00000590052 955 ntBASIC23.08■■□□□ 1.29
GSX1Q9H4S2 MIR639-201ENST00000384974 98 ntBASIC23.07■■□□□ 1.28
GSX1Q9H4S2 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC23.06■■□□□ 1.28
GSX1Q9H4S2 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
GSX1Q9H4S2 BRD4-212ENST00000630599 726 ntTSL 2 BASIC23.06■■□□□ 1.28
GSX1Q9H4S2 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
GSX1Q9H4S2 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
GSX1Q9H4S2 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
GSX1Q9H4S2 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.03■■□□□ 1.28
GSX1Q9H4S2 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
GSX1Q9H4S2 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
GSX1Q9H4S2 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
GSX1Q9H4S2 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
GSX1Q9H4S2 CALM3-209ENST00000597743 577 ntTSL 4 BASIC22.99■■□□□ 1.27
GSX1Q9H4S2 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC22.98■■□□□ 1.27
GSX1Q9H4S2 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC22.98■■□□□ 1.27
GSX1Q9H4S2 DUX4L29-201ENST00000425409 679 ntBASIC22.97■■□□□ 1.27
GSX1Q9H4S2 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC22.97■■□□□ 1.27
GSX1Q9H4S2 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC22.97■■□□□ 1.27
GSX1Q9H4S2 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
GSX1Q9H4S2 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC22.95■■□□□ 1.26
GSX1Q9H4S2 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC22.94■■□□□ 1.26
GSX1Q9H4S2 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC22.94■■□□□ 1.26
GSX1Q9H4S2 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
GSX1Q9H4S2 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
GSX1Q9H4S2 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
GSX1Q9H4S2 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
GSX1Q9H4S2 MACF1-219ENST00000484793 834 ntTSL 2 BASIC22.91■■□□□ 1.26
GSX1Q9H4S2 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
GSX1Q9H4S2 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
GSX1Q9H4S2 AC016575.1-201ENST00000607026 382 ntBASIC22.9■■□□□ 1.26
GSX1Q9H4S2 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC22.89■■□□□ 1.25
GSX1Q9H4S2 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
GSX1Q9H4S2 DENR-202ENST00000455982 1052 ntTSL 5 BASIC22.87■■□□□ 1.25
GSX1Q9H4S2 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
GSX1Q9H4S2 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
GSX1Q9H4S2 MIR3648-2-201ENST00000581792 180 ntBASIC22.85■■□□□ 1.25
GSX1Q9H4S2 MIR3648-1-201ENST00000615959 180 ntBASIC22.85■■□□□ 1.25
GSX1Q9H4S2 ABHD17AP3-201ENST00000503096 1137 ntBASIC22.84■■□□□ 1.25
GSX1Q9H4S2 RNF166-209ENST00000567844 633 ntTSL 5 BASIC22.84■■□□□ 1.25
GSX1Q9H4S2 AC021231.2-201ENST00000594613 730 ntBASIC22.84■■□□□ 1.25
GSX1Q9H4S2 GDI1-215ENST00000630693 786 ntTSL 4 BASIC22.84■■□□□ 1.25
GSX1Q9H4S2 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
GSX1Q9H4S2 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
GSX1Q9H4S2 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC22.83■■□□□ 1.25
GSX1Q9H4S2 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
GSX1Q9H4S2 RPS2-209ENST00000529806 993 ntTSL 3 BASIC22.79■■□□□ 1.24
GSX1Q9H4S2 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
GSX1Q9H4S2 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
GSX1Q9H4S2 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
GSX1Q9H4S2 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
GSX1Q9H4S2 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC22.76■■□□□ 1.23
GSX1Q9H4S2 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
GSX1Q9H4S2 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
GSX1Q9H4S2 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC22.74■■□□□ 1.23
GSX1Q9H4S2 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
GSX1Q9H4S2 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC22.73■■□□□ 1.23
GSX1Q9H4S2 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC22.73■■□□□ 1.23
GSX1Q9H4S2 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC22.72■■□□□ 1.23
GSX1Q9H4S2 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC22.72■■□□□ 1.23
GSX1Q9H4S2 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
GSX1Q9H4S2 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC22.7■■□□□ 1.22
GSX1Q9H4S2 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC22.7■■□□□ 1.22
GSX1Q9H4S2 CIB2-204ENST00000557846 934 ntTSL 3 BASIC22.69■■□□□ 1.22
GSX1Q9H4S2 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
GSX1Q9H4S2 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
GSX1Q9H4S2 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
GSX1Q9H4S2 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
GSX1Q9H4S2 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
GSX1Q9H4S2 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
GSX1Q9H4S2 CR559946.2-201ENST00000623684 991 ntBASIC22.68■■□□□ 1.22
GSX1Q9H4S2 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
GSX1Q9H4S2 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
GSX1Q9H4S2 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC22.67■■□□□ 1.22
GSX1Q9H4S2 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
GSX1Q9H4S2 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
GSX1Q9H4S2 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
GSX1Q9H4S2 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
GSX1Q9H4S2 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
GSX1Q9H4S2 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC22.65■■□□□ 1.22
GSX1Q9H4S2 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
GSX1Q9H4S2 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
GSX1Q9H4S2 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
GSX1Q9H4S2 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC22.63■■□□□ 1.21
GSX1Q9H4S2 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
GSX1Q9H4S2 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
GSX1Q9H4S2 DUX4L11-201ENST00000611504 1267 ntBASIC22.63■■□□□ 1.21
GSX1Q9H4S2 DUX4L12-201ENST00000614593 1267 ntBASIC22.63■■□□□ 1.21
GSX1Q9H4S2 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
GSX1Q9H4S2 DUX4L14-201ENST00000621227 1267 ntBASIC22.63■■□□□ 1.21
GSX1Q9H4S2 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC22.63■■□□□ 1.21
GSX1Q9H4S2 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms