Protein–RNA interactions for Protein: Q9H4S2

GSX1, GS homeobox 1, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSX1Q9H4S2 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC28.85■■■□□ 2.21
GSX1Q9H4S2 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC28.6■■■□□ 2.17
GSX1Q9H4S2 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC28.58■■■□□ 2.17
GSX1Q9H4S2 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
GSX1Q9H4S2 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC27.85■■■□□ 2.05
GSX1Q9H4S2 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
GSX1Q9H4S2 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC27.64■■■□□ 2.02
GSX1Q9H4S2 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
GSX1Q9H4S2 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC27.57■■■□□ 2
GSX1Q9H4S2 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
GSX1Q9H4S2 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
GSX1Q9H4S2 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC27.22■■□□□ 1.95
GSX1Q9H4S2 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
GSX1Q9H4S2 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC27.12■■□□□ 1.93
GSX1Q9H4S2 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
GSX1Q9H4S2 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
GSX1Q9H4S2 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC26.96■■□□□ 1.91
GSX1Q9H4S2 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
GSX1Q9H4S2 AL356512.1-201ENST00000607453 1739 ntBASIC26.95■■□□□ 1.9
GSX1Q9H4S2 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
GSX1Q9H4S2 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
GSX1Q9H4S2 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
GSX1Q9H4S2 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC26.79■■□□□ 1.88
GSX1Q9H4S2 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC26.72■■□□□ 1.87
GSX1Q9H4S2 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
GSX1Q9H4S2 INO80B-203ENST00000409917 796 ntTSL 2 BASIC26.61■■□□□ 1.85
GSX1Q9H4S2 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
GSX1Q9H4S2 ZNRF2P1-201ENST00000441407 443 ntBASIC26.59■■□□□ 1.85
GSX1Q9H4S2 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC26.57■■□□□ 1.84
GSX1Q9H4S2 AC006077.2-201ENST00000623591 457 ntBASIC26.49■■□□□ 1.83
GSX1Q9H4S2 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC26.4■■□□□ 1.82
GSX1Q9H4S2 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC26.28■■□□□ 1.8
GSX1Q9H4S2 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
GSX1Q9H4S2 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC26.17■■□□□ 1.78
GSX1Q9H4S2 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
GSX1Q9H4S2 AC015813.7-201ENST00000623294 581 ntBASIC26.04■■□□□ 1.76
GSX1Q9H4S2 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
GSX1Q9H4S2 AP002365.1-201ENST00000603448 772 ntBASIC25.92■■□□□ 1.74
GSX1Q9H4S2 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC25.82■■□□□ 1.72
GSX1Q9H4S2 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
GSX1Q9H4S2 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC25.72■■□□□ 1.71
GSX1Q9H4S2 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
GSX1Q9H4S2 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC25.71■■□□□ 1.71
GSX1Q9H4S2 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC25.7■■□□□ 1.7
GSX1Q9H4S2 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
GSX1Q9H4S2 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC25.61■■□□□ 1.69
GSX1Q9H4S2 HES6-203ENST00000409160 1600 ntTSL 2 BASIC25.6■■□□□ 1.69
GSX1Q9H4S2 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
GSX1Q9H4S2 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC25.6■■□□□ 1.69
GSX1Q9H4S2 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC25.59■■□□□ 1.69
GSX1Q9H4S2 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC25.58■■□□□ 1.69
GSX1Q9H4S2 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
GSX1Q9H4S2 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
GSX1Q9H4S2 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC25.45■■□□□ 1.66
GSX1Q9H4S2 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC25.45■■□□□ 1.66
GSX1Q9H4S2 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC25.43■■□□□ 1.66
GSX1Q9H4S2 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
GSX1Q9H4S2 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC25.42■■□□□ 1.66
GSX1Q9H4S2 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC25.42■■□□□ 1.66
GSX1Q9H4S2 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
GSX1Q9H4S2 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC25.4■■□□□ 1.66
GSX1Q9H4S2 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
GSX1Q9H4S2 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC25.33■■□□□ 1.65
GSX1Q9H4S2 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC25.31■■□□□ 1.64
GSX1Q9H4S2 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
GSX1Q9H4S2 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
GSX1Q9H4S2 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
GSX1Q9H4S2 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
GSX1Q9H4S2 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC25.24■■□□□ 1.63
GSX1Q9H4S2 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
GSX1Q9H4S2 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC25.19■■□□□ 1.62
GSX1Q9H4S2 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC25.13■■□□□ 1.61
GSX1Q9H4S2 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
GSX1Q9H4S2 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
GSX1Q9H4S2 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
GSX1Q9H4S2 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC25.06■■□□□ 1.6
GSX1Q9H4S2 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC25.06■■□□□ 1.6
GSX1Q9H4S2 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC25.06■■□□□ 1.6
GSX1Q9H4S2 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
GSX1Q9H4S2 DYNLL1-208ENST00000550178 581 ntBASIC25.06■■□□□ 1.6
GSX1Q9H4S2 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
GSX1Q9H4S2 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC25.05■■□□□ 1.6
GSX1Q9H4S2 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC25.01■■□□□ 1.59
GSX1Q9H4S2 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC25.01■■□□□ 1.59
GSX1Q9H4S2 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
GSX1Q9H4S2 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC24.99■■□□□ 1.59
GSX1Q9H4S2 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
GSX1Q9H4S2 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC24.94■■□□□ 1.58
GSX1Q9H4S2 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC24.93■■□□□ 1.58
GSX1Q9H4S2 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
GSX1Q9H4S2 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC24.9■■□□□ 1.58
GSX1Q9H4S2 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC24.89■■□□□ 1.58
GSX1Q9H4S2 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
GSX1Q9H4S2 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
GSX1Q9H4S2 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
GSX1Q9H4S2 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC24.84■■□□□ 1.57
GSX1Q9H4S2 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC24.84■■□□□ 1.57
GSX1Q9H4S2 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC24.84■■□□□ 1.57
GSX1Q9H4S2 AL031258.1-201ENST00000623562 325 ntBASIC24.84■■□□□ 1.57
GSX1Q9H4S2 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms