Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC28.49■■■□□ 2.15
RNF139Q8WU17 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC28.49■■■□□ 2.15
RNF139Q8WU17 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
RNF139Q8WU17 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
RNF139Q8WU17 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
RNF139Q8WU17 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC28.47■■■□□ 2.15
RNF139Q8WU17 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC28.47■■■□□ 2.15
RNF139Q8WU17 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
RNF139Q8WU17 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
RNF139Q8WU17 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC28.46■■■□□ 2.15
RNF139Q8WU17 WASH5P-204ENST00000632292 975 ntBASIC28.46■■■□□ 2.15
RNF139Q8WU17 AC120057.4-201ENST00000624722 1615 ntBASIC28.45■■■□□ 2.14
RNF139Q8WU17 EBPL-202ENST00000378268 680 ntTSL 3 BASIC28.45■■■□□ 2.14
RNF139Q8WU17 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
RNF139Q8WU17 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC28.45■■■□□ 2.14
RNF139Q8WU17 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
RNF139Q8WU17 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
RNF139Q8WU17 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC28.44■■■□□ 2.14
RNF139Q8WU17 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
RNF139Q8WU17 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
RNF139Q8WU17 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
RNF139Q8WU17 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC28.42■■■□□ 2.14
RNF139Q8WU17 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
RNF139Q8WU17 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC28.41■■■□□ 2.14
RNF139Q8WU17 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
RNF139Q8WU17 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
RNF139Q8WU17 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC28.39■■■□□ 2.14
RNF139Q8WU17 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
RNF139Q8WU17 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
RNF139Q8WU17 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
RNF139Q8WU17 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
RNF139Q8WU17 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
RNF139Q8WU17 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
RNF139Q8WU17 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
RNF139Q8WU17 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
RNF139Q8WU17 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
RNF139Q8WU17 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
RNF139Q8WU17 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
RNF139Q8WU17 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
RNF139Q8WU17 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
RNF139Q8WU17 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
RNF139Q8WU17 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
RNF139Q8WU17 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
RNF139Q8WU17 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
RNF139Q8WU17 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
RNF139Q8WU17 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC28.23■■■□□ 2.11
RNF139Q8WU17 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
RNF139Q8WU17 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
RNF139Q8WU17 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC28.23■■■□□ 2.11
RNF139Q8WU17 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC28.23■■■□□ 2.11
RNF139Q8WU17 HNRNPLP2-201ENST00000568980 1570 ntBASIC28.21■■■□□ 2.11
RNF139Q8WU17 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC28.21■■■□□ 2.11
RNF139Q8WU17 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
RNF139Q8WU17 ST7-205ENST00000393446 2114 ntTSL 5 BASIC28.21■■■□□ 2.11
RNF139Q8WU17 DENR-202ENST00000455982 1052 ntTSL 5 BASIC28.2■■■□□ 2.1
RNF139Q8WU17 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
RNF139Q8WU17 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
RNF139Q8WU17 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
RNF139Q8WU17 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
RNF139Q8WU17 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
RNF139Q8WU17 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
RNF139Q8WU17 MIR762-201ENST00000390236 83 ntBASIC28.15■■■□□ 2.1
RNF139Q8WU17 CHML-205ENST00000638160 705 ntTSL 3 BASIC28.14■■■□□ 2.1
RNF139Q8WU17 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
RNF139Q8WU17 AP006261.1-201ENST00000584783 668 ntBASIC28.13■■■□□ 2.09
RNF139Q8WU17 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
RNF139Q8WU17 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC28.13■■■□□ 2.09
RNF139Q8WU17 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
RNF139Q8WU17 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
RNF139Q8WU17 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
RNF139Q8WU17 ST7-202ENST00000323984 2142 ntTSL 5 BASIC28.1■■■□□ 2.09
RNF139Q8WU17 ST7-207ENST00000393449 2127 ntTSL 5 BASIC28.1■■■□□ 2.09
RNF139Q8WU17 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
RNF139Q8WU17 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
RNF139Q8WU17 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC28.09■■■□□ 2.09
RNF139Q8WU17 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
RNF139Q8WU17 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
RNF139Q8WU17 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC28.06■■■□□ 2.08
RNF139Q8WU17 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC28.06■■■□□ 2.08
RNF139Q8WU17 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
RNF139Q8WU17 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC28.05■■■□□ 2.08
RNF139Q8WU17 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
RNF139Q8WU17 AC005559.1-201ENST00000589661 871 ntBASIC28.05■■■□□ 2.08
RNF139Q8WU17 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC28.04■■■□□ 2.08
RNF139Q8WU17 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
RNF139Q8WU17 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC28.04■■■□□ 2.08
RNF139Q8WU17 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC28.04■■■□□ 2.08
RNF139Q8WU17 MIR3665-201ENST00000578708 105 ntBASIC28.04■■■□□ 2.08
RNF139Q8WU17 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
RNF139Q8WU17 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC28.04■■■□□ 2.08
RNF139Q8WU17 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
RNF139Q8WU17 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC28.03■■■□□ 2.08
RNF139Q8WU17 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC28.03■■■□□ 2.08
RNF139Q8WU17 AL162393.1-201ENST00000437852 946 ntBASIC28.03■■■□□ 2.08
RNF139Q8WU17 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
RNF139Q8WU17 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
RNF139Q8WU17 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
RNF139Q8WU17 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC28.02■■■□□ 2.08
RNF139Q8WU17 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
RNF139Q8WU17 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC28.01■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms