Protein–RNA interactions for Protein: Q8TCU5

GRIN3A, Glutamate receptor ionotropic, NMDA 3A, humanhuman

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3AQ8TCU5 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
GRIN3AQ8TCU5 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
GRIN3AQ8TCU5 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
GRIN3AQ8TCU5 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
GRIN3AQ8TCU5 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
GRIN3AQ8TCU5 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC27.61■■■□□ 2.01
GRIN3AQ8TCU5 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
GRIN3AQ8TCU5 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC27.59■■■□□ 2.01
GRIN3AQ8TCU5 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
GRIN3AQ8TCU5 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC27.59■■■□□ 2.01
GRIN3AQ8TCU5 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
GRIN3AQ8TCU5 WASH5P-204ENST00000632292 975 ntBASIC27.56■■■□□ 2
GRIN3AQ8TCU5 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC27.56■■■□□ 2
GRIN3AQ8TCU5 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC27.55■■■□□ 2
GRIN3AQ8TCU5 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC27.55■■■□□ 2
GRIN3AQ8TCU5 ST7-202ENST00000323984 2142 ntTSL 5 BASIC27.55■■■□□ 2
GRIN3AQ8TCU5 ST7-207ENST00000393449 2127 ntTSL 5 BASIC27.55■■■□□ 2
GRIN3AQ8TCU5 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
GRIN3AQ8TCU5 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC27.53■■■□□ 2
GRIN3AQ8TCU5 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
GRIN3AQ8TCU5 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC27.52■■■□□ 2
GRIN3AQ8TCU5 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC27.51■■□□□ 1.99
GRIN3AQ8TCU5 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
GRIN3AQ8TCU5 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
GRIN3AQ8TCU5 HNRNPLP2-201ENST00000568980 1570 ntBASIC27.49■■□□□ 1.99
GRIN3AQ8TCU5 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC27.49■■□□□ 1.99
GRIN3AQ8TCU5 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC27.48■■□□□ 1.99
GRIN3AQ8TCU5 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
GRIN3AQ8TCU5 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
GRIN3AQ8TCU5 RPS2P35-201ENST00000443417 897 ntBASIC27.47■■□□□ 1.99
GRIN3AQ8TCU5 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
GRIN3AQ8TCU5 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC27.46■■□□□ 1.99
GRIN3AQ8TCU5 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
GRIN3AQ8TCU5 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
GRIN3AQ8TCU5 AL162393.1-201ENST00000437852 946 ntBASIC27.43■■□□□ 1.98
GRIN3AQ8TCU5 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC27.43■■□□□ 1.98
GRIN3AQ8TCU5 AC120057.4-201ENST00000624722 1615 ntBASIC27.42■■□□□ 1.98
GRIN3AQ8TCU5 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC27.42■■□□□ 1.98
GRIN3AQ8TCU5 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC27.41■■□□□ 1.98
GRIN3AQ8TCU5 AP006261.1-201ENST00000584783 668 ntBASIC27.41■■□□□ 1.98
GRIN3AQ8TCU5 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC27.4■■□□□ 1.98
GRIN3AQ8TCU5 NRG1-221ENST00000614767 762 ntTSL 5 BASIC27.4■■□□□ 1.98
GRIN3AQ8TCU5 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
GRIN3AQ8TCU5 MIR762-201ENST00000390236 83 ntBASIC27.39■■□□□ 1.98
GRIN3AQ8TCU5 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC27.39■■□□□ 1.98
GRIN3AQ8TCU5 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
GRIN3AQ8TCU5 DENR-202ENST00000455982 1052 ntTSL 5 BASIC27.38■■□□□ 1.97
GRIN3AQ8TCU5 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC27.38■■□□□ 1.97
GRIN3AQ8TCU5 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
GRIN3AQ8TCU5 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
GRIN3AQ8TCU5 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC27.36■■□□□ 1.97
GRIN3AQ8TCU5 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
GRIN3AQ8TCU5 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
GRIN3AQ8TCU5 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC27.35■■□□□ 1.97
GRIN3AQ8TCU5 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
GRIN3AQ8TCU5 CHML-205ENST00000638160 705 ntTSL 3 BASIC27.35■■□□□ 1.97
GRIN3AQ8TCU5 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
GRIN3AQ8TCU5 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
GRIN3AQ8TCU5 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC27.33■■□□□ 1.97
GRIN3AQ8TCU5 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
GRIN3AQ8TCU5 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC27.32■■□□□ 1.96
GRIN3AQ8TCU5 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
GRIN3AQ8TCU5 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
GRIN3AQ8TCU5 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
GRIN3AQ8TCU5 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
GRIN3AQ8TCU5 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
GRIN3AQ8TCU5 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC27.29■■□□□ 1.96
GRIN3AQ8TCU5 MIR3665-201ENST00000578708 105 ntBASIC27.29■■□□□ 1.96
GRIN3AQ8TCU5 AC005559.1-201ENST00000589661 871 ntBASIC27.29■■□□□ 1.96
GRIN3AQ8TCU5 DUX4L28-201ENST00000623687 678 ntBASIC27.29■■□□□ 1.96
GRIN3AQ8TCU5 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
GRIN3AQ8TCU5 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC27.28■■□□□ 1.96
GRIN3AQ8TCU5 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
GRIN3AQ8TCU5 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
GRIN3AQ8TCU5 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
GRIN3AQ8TCU5 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC27.26■■□□□ 1.95
GRIN3AQ8TCU5 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
GRIN3AQ8TCU5 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
GRIN3AQ8TCU5 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
GRIN3AQ8TCU5 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
GRIN3AQ8TCU5 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
GRIN3AQ8TCU5 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
GRIN3AQ8TCU5 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
GRIN3AQ8TCU5 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
GRIN3AQ8TCU5 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
GRIN3AQ8TCU5 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
GRIN3AQ8TCU5 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
GRIN3AQ8TCU5 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
GRIN3AQ8TCU5 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
GRIN3AQ8TCU5 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
GRIN3AQ8TCU5 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.95
GRIN3AQ8TCU5 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
GRIN3AQ8TCU5 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
GRIN3AQ8TCU5 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
GRIN3AQ8TCU5 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC27.18■■□□□ 1.94
GRIN3AQ8TCU5 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
GRIN3AQ8TCU5 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
GRIN3AQ8TCU5 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC27.17■■□□□ 1.94
GRIN3AQ8TCU5 AC087741.3-201ENST00000624270 1347 ntBASIC27.16■■□□□ 1.94
GRIN3AQ8TCU5 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms