Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC43.51■■■■■ 4.56
CFAP43Q8NDM7 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC43.5■■■■■ 4.55
CFAP43Q8NDM7 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC43.5■■■■■ 4.55
CFAP43Q8NDM7 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC43.5■■■■■ 4.55
CFAP43Q8NDM7 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC43.47■■■■■ 4.55
CFAP43Q8NDM7 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC43.46■■■■■ 4.55
CFAP43Q8NDM7 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC43.46■■■■■ 4.55
CFAP43Q8NDM7 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC43.45■■■■■ 4.55
CFAP43Q8NDM7 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC43.45■■■■■ 4.55
CFAP43Q8NDM7 ZNRF2P2-203ENST00000454624 420 ntBASIC43.39■■■■■ 4.54
CFAP43Q8NDM7 DENR-202ENST00000455982 1052 ntTSL 5 BASIC43.37■■■■■ 4.53
CFAP43Q8NDM7 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC43.36■■■■■ 4.53
CFAP43Q8NDM7 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC43.35■■■■■ 4.53
CFAP43Q8NDM7 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC43.35■■■■■ 4.53
CFAP43Q8NDM7 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC43.35■■■■■ 4.53
CFAP43Q8NDM7 BOD1-206ENST00000480951 814 ntTSL 2 BASIC43.35■■■■■ 4.53
CFAP43Q8NDM7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC43.35■■■■■ 4.53
CFAP43Q8NDM7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC43.34■■■■■ 4.53
CFAP43Q8NDM7 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC43.34■■■■■ 4.53
CFAP43Q8NDM7 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC43.33■■■■■ 4.53
CFAP43Q8NDM7 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC43.33■■■■■ 4.53
CFAP43Q8NDM7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC43.33■■■■■ 4.53
CFAP43Q8NDM7 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC43.31■■■■■ 4.52
CFAP43Q8NDM7 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC43.3■■■■■ 4.52
CFAP43Q8NDM7 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC43.3■■■■■ 4.52
CFAP43Q8NDM7 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC43.3■■■■■ 4.52
CFAP43Q8NDM7 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC43.29■■■■■ 4.52
CFAP43Q8NDM7 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC43.29■■■■■ 4.52
CFAP43Q8NDM7 HGH1-207ENST00000628266 258 ntTSL 5 BASIC43.28■■■■■ 4.52
CFAP43Q8NDM7 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC43.24■■■■■ 4.51
CFAP43Q8NDM7 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC43.24■■■■■ 4.51
CFAP43Q8NDM7 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC43.24■■■■■ 4.51
CFAP43Q8NDM7 MIR4449-201ENST00000578365 66 ntBASIC43.22■■■■■ 4.51
CFAP43Q8NDM7 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC43.21■■■■■ 4.51
CFAP43Q8NDM7 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC43.18■■■■■ 4.5
CFAP43Q8NDM7 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC43.18■■■■■ 4.5
CFAP43Q8NDM7 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC43.14■■■■■ 4.5
CFAP43Q8NDM7 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC43.11■■■■■ 4.49
CFAP43Q8NDM7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC43.11■■■■■ 4.49
CFAP43Q8NDM7 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC43.11■■■■■ 4.49
CFAP43Q8NDM7 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC43.1■■■■■ 4.49
CFAP43Q8NDM7 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC43.1■■■■■ 4.49
CFAP43Q8NDM7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC43.09■■■■■ 4.49
CFAP43Q8NDM7 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC43.08■■■■■ 4.49
CFAP43Q8NDM7 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC43.06■■■■■ 4.48
CFAP43Q8NDM7 RPS2-209ENST00000529806 993 ntTSL 3 BASIC43.05■■■■■ 4.48
CFAP43Q8NDM7 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC43.05■■■■■ 4.48
CFAP43Q8NDM7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC43.02■■■■■ 4.48
CFAP43Q8NDM7 MACF1-219ENST00000484793 834 ntTSL 2 BASIC43.02■■■■■ 4.48
CFAP43Q8NDM7 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC43.01■■■■■ 4.48
CFAP43Q8NDM7 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC43■■■■■ 4.47
CFAP43Q8NDM7 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC43■■■■■ 4.47
CFAP43Q8NDM7 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC42.99■■■■■ 4.47
CFAP43Q8NDM7 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC42.98■■■■■ 4.47
CFAP43Q8NDM7 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC42.96■■■■■ 4.47
CFAP43Q8NDM7 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC42.94■■■■■ 4.46
CFAP43Q8NDM7 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC42.92■■■■■ 4.46
CFAP43Q8NDM7 MIR639-201ENST00000384974 98 ntBASIC42.92■■■■■ 4.46
CFAP43Q8NDM7 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC42.92■■■■■ 4.46
CFAP43Q8NDM7 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC42.91■■■■■ 4.46
CFAP43Q8NDM7 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC42.91■■■■■ 4.46
CFAP43Q8NDM7 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC42.89■■■■■ 4.46
CFAP43Q8NDM7 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC42.88■■■■■ 4.46
CFAP43Q8NDM7 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC42.88■■■■■ 4.45
CFAP43Q8NDM7 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC42.87■■■■■ 4.45
CFAP43Q8NDM7 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC42.87■■■■■ 4.45
CFAP43Q8NDM7 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC42.87■■■■■ 4.45
CFAP43Q8NDM7 HSD17B1P1-201ENST00000590052 955 ntBASIC42.86■■■■■ 4.45
CFAP43Q8NDM7 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC42.85■■■■■ 4.45
CFAP43Q8NDM7 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC42.84■■■■■ 4.45
CFAP43Q8NDM7 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC42.83■■■■■ 4.45
CFAP43Q8NDM7 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC42.83■■■■■ 4.45
CFAP43Q8NDM7 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC42.82■■■■■ 4.45
CFAP43Q8NDM7 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC42.82■■■■■ 4.44
CFAP43Q8NDM7 WASH5P-204ENST00000632292 975 ntBASIC42.82■■■■■ 4.44
CFAP43Q8NDM7 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC42.81■■■■■ 4.44
CFAP43Q8NDM7 DUX4L29-201ENST00000425409 679 ntBASIC42.8■■■■■ 4.44
CFAP43Q8NDM7 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC42.79■■■■■ 4.44
CFAP43Q8NDM7 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC42.79■■■■■ 4.44
CFAP43Q8NDM7 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC42.77■■■■■ 4.44
CFAP43Q8NDM7 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC42.77■■■■■ 4.44
CFAP43Q8NDM7 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC42.77■■■■■ 4.44
CFAP43Q8NDM7 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC42.77■■■■■ 4.44
CFAP43Q8NDM7 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC42.76■■■■■ 4.44
CFAP43Q8NDM7 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC42.75■■■■■ 4.43
CFAP43Q8NDM7 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC42.74■■■■■ 4.43
CFAP43Q8NDM7 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC42.74■■■■■ 4.43
CFAP43Q8NDM7 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC42.73■■■■■ 4.43
CFAP43Q8NDM7 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC42.73■■■■■ 4.43
CFAP43Q8NDM7 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC42.72■■■■■ 4.43
CFAP43Q8NDM7 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC42.72■■■■■ 4.43
CFAP43Q8NDM7 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC42.7■■■■■ 4.43
CFAP43Q8NDM7 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC42.7■■■■■ 4.43
CFAP43Q8NDM7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC42.7■■■■■ 4.43
CFAP43Q8NDM7 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC42.66■■■■■ 4.42
CFAP43Q8NDM7 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC42.66■■■■■ 4.42
CFAP43Q8NDM7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC42.66■■■■■ 4.42
CFAP43Q8NDM7 CALM3-209ENST00000597743 577 ntTSL 4 BASIC42.66■■■■■ 4.42
CFAP43Q8NDM7 RNF166-209ENST00000567844 633 ntTSL 5 BASIC42.65■■■■■ 4.42
CFAP43Q8NDM7 BRD4-212ENST00000630599 726 ntTSL 2 BASIC42.65■■■■■ 4.42
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms