Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COMMD1Q8N668 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COMMD1Q8N668 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
COMMD1Q8N668 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC22.25■■□□□ 1.15
COMMD1Q8N668 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC22.25■■□□□ 1.15
COMMD1Q8N668 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC22.25■■□□□ 1.15
COMMD1Q8N668 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
COMMD1Q8N668 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
COMMD1Q8N668 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COMMD1Q8N668 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC22.24■■□□□ 1.15
COMMD1Q8N668 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC22.22■■□□□ 1.15
COMMD1Q8N668 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COMMD1Q8N668 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
COMMD1Q8N668 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
COMMD1Q8N668 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
COMMD1Q8N668 MVK-208ENST00000539696 608 ntTSL 5 BASIC22.21■■□□□ 1.15
COMMD1Q8N668 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
COMMD1Q8N668 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
COMMD1Q8N668 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC22.2■■□□□ 1.15
COMMD1Q8N668 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC22.19■■□□□ 1.14
COMMD1Q8N668 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
COMMD1Q8N668 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
COMMD1Q8N668 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
COMMD1Q8N668 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC22.15■■□□□ 1.14
COMMD1Q8N668 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
COMMD1Q8N668 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
COMMD1Q8N668 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
COMMD1Q8N668 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
COMMD1Q8N668 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC22.12■■□□□ 1.13
COMMD1Q8N668 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
COMMD1Q8N668 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC22.11■■□□□ 1.13
COMMD1Q8N668 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
COMMD1Q8N668 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
COMMD1Q8N668 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
COMMD1Q8N668 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
COMMD1Q8N668 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC22.09■■□□□ 1.13
COMMD1Q8N668 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
COMMD1Q8N668 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC22.07■■□□□ 1.12
COMMD1Q8N668 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
COMMD1Q8N668 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COMMD1Q8N668 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC22.05■■□□□ 1.12
COMMD1Q8N668 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
COMMD1Q8N668 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COMMD1Q8N668 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
COMMD1Q8N668 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COMMD1Q8N668 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COMMD1Q8N668 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COMMD1Q8N668 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COMMD1Q8N668 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
COMMD1Q8N668 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
COMMD1Q8N668 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC22.03■■□□□ 1.12
COMMD1Q8N668 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC22.02■■□□□ 1.12
COMMD1Q8N668 RARRES2P7-201ENST00000567349 469 ntBASIC22.02■■□□□ 1.12
COMMD1Q8N668 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC22.02■■□□□ 1.12
COMMD1Q8N668 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COMMD1Q8N668 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC22.01■■□□□ 1.11
COMMD1Q8N668 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COMMD1Q8N668 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22■■□□□ 1.11
COMMD1Q8N668 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC22■■□□□ 1.11
COMMD1Q8N668 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COMMD1Q8N668 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COMMD1Q8N668 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COMMD1Q8N668 KLF16-203ENST00000592313 508 ntTSL 3 BASIC21.99■■□□□ 1.11
COMMD1Q8N668 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
COMMD1Q8N668 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COMMD1Q8N668 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
COMMD1Q8N668 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COMMD1Q8N668 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COMMD1Q8N668 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
COMMD1Q8N668 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COMMD1Q8N668 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC21.96■■□□□ 1.11
COMMD1Q8N668 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
COMMD1Q8N668 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COMMD1Q8N668 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC21.95■■□□□ 1.1
COMMD1Q8N668 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC21.95■■□□□ 1.1
COMMD1Q8N668 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COMMD1Q8N668 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.95■■□□□ 1.1
COMMD1Q8N668 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
COMMD1Q8N668 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
COMMD1Q8N668 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COMMD1Q8N668 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC21.94■■□□□ 1.1
COMMD1Q8N668 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COMMD1Q8N668 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
COMMD1Q8N668 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.91■■□□□ 1.1
COMMD1Q8N668 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COMMD1Q8N668 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC21.9■■□□□ 1.1
COMMD1Q8N668 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
COMMD1Q8N668 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
COMMD1Q8N668 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
COMMD1Q8N668 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COMMD1Q8N668 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.86■■□□□ 1.09
COMMD1Q8N668 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COMMD1Q8N668 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
COMMD1Q8N668 SETD8P1-201ENST00000623146 1180 ntBASIC21.85■■□□□ 1.09
COMMD1Q8N668 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
COMMD1Q8N668 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.85■■□□□ 1.09
COMMD1Q8N668 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COMMD1Q8N668 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC21.84■■□□□ 1.09
COMMD1Q8N668 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
COMMD1Q8N668 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms