Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC27.66■■■□□ 2.02
COMMD1Q8N668 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC27.53■■■□□ 2
COMMD1Q8N668 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC26.86■■□□□ 1.89
COMMD1Q8N668 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
COMMD1Q8N668 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
COMMD1Q8N668 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
COMMD1Q8N668 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
COMMD1Q8N668 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
COMMD1Q8N668 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
COMMD1Q8N668 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC26.15■■□□□ 1.78
COMMD1Q8N668 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC26.11■■□□□ 1.77
COMMD1Q8N668 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
COMMD1Q8N668 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
COMMD1Q8N668 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
COMMD1Q8N668 AL356512.1-201ENST00000607453 1739 ntBASIC25.89■■□□□ 1.74
COMMD1Q8N668 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
COMMD1Q8N668 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC25.85■■□□□ 1.73
COMMD1Q8N668 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
COMMD1Q8N668 HES6-203ENST00000409160 1600 ntTSL 2 BASIC25.72■■□□□ 1.71
COMMD1Q8N668 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC25.6■■□□□ 1.69
COMMD1Q8N668 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC25.4■■□□□ 1.66
COMMD1Q8N668 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC25.34■■□□□ 1.65
COMMD1Q8N668 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
COMMD1Q8N668 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
COMMD1Q8N668 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC25.24■■□□□ 1.63
COMMD1Q8N668 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
COMMD1Q8N668 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC25.1■■□□□ 1.61
COMMD1Q8N668 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
COMMD1Q8N668 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
COMMD1Q8N668 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
COMMD1Q8N668 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC24.96■■□□□ 1.59
COMMD1Q8N668 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC24.96■■□□□ 1.59
COMMD1Q8N668 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
COMMD1Q8N668 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC24.93■■□□□ 1.58
COMMD1Q8N668 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC24.9■■□□□ 1.58
COMMD1Q8N668 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
COMMD1Q8N668 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC24.87■■□□□ 1.57
COMMD1Q8N668 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
COMMD1Q8N668 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
COMMD1Q8N668 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
COMMD1Q8N668 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
COMMD1Q8N668 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
COMMD1Q8N668 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
COMMD1Q8N668 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
COMMD1Q8N668 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
COMMD1Q8N668 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
COMMD1Q8N668 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
COMMD1Q8N668 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
COMMD1Q8N668 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
COMMD1Q8N668 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.51
COMMD1Q8N668 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
COMMD1Q8N668 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
COMMD1Q8N668 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
COMMD1Q8N668 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
COMMD1Q8N668 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
COMMD1Q8N668 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
COMMD1Q8N668 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
COMMD1Q8N668 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
COMMD1Q8N668 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC24.28■■□□□ 1.48
COMMD1Q8N668 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
COMMD1Q8N668 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
COMMD1Q8N668 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
COMMD1Q8N668 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
COMMD1Q8N668 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
COMMD1Q8N668 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
COMMD1Q8N668 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
COMMD1Q8N668 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
COMMD1Q8N668 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
COMMD1Q8N668 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC24.13■■□□□ 1.45
COMMD1Q8N668 ST7-205ENST00000393446 2114 ntTSL 5 BASIC24.08■■□□□ 1.45
COMMD1Q8N668 ST7-202ENST00000323984 2142 ntTSL 5 BASIC24.07■■□□□ 1.44
COMMD1Q8N668 ST7-207ENST00000393449 2127 ntTSL 5 BASIC24.07■■□□□ 1.44
COMMD1Q8N668 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
COMMD1Q8N668 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC24■■□□□ 1.43
COMMD1Q8N668 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC23.98■■□□□ 1.43
COMMD1Q8N668 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
COMMD1Q8N668 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
COMMD1Q8N668 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
COMMD1Q8N668 INO80B-203ENST00000409917 796 ntTSL 2 BASIC23.93■■□□□ 1.42
COMMD1Q8N668 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
COMMD1Q8N668 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
COMMD1Q8N668 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC23.88■■□□□ 1.41
COMMD1Q8N668 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC23.83■■□□□ 1.41
COMMD1Q8N668 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
COMMD1Q8N668 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COMMD1Q8N668 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COMMD1Q8N668 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COMMD1Q8N668 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
COMMD1Q8N668 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC23.75■■□□□ 1.39
COMMD1Q8N668 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
COMMD1Q8N668 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC23.72■■□□□ 1.39
COMMD1Q8N668 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC23.71■■□□□ 1.39
COMMD1Q8N668 AC015813.7-201ENST00000623294 581 ntBASIC23.71■■□□□ 1.39
COMMD1Q8N668 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
COMMD1Q8N668 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COMMD1Q8N668 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC23.68■■□□□ 1.38
COMMD1Q8N668 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
COMMD1Q8N668 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COMMD1Q8N668 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC23.66■■□□□ 1.38
COMMD1Q8N668 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms