Protein–RNA interactions for Protein: Q8IWR1

TRIM59, Tripartite motif-containing protein 59, humanhuman

Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59Q8IWR1 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC29.73■■■□□ 2.35
TRIM59Q8IWR1 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
TRIM59Q8IWR1 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC29.7■■■□□ 2.34
TRIM59Q8IWR1 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC29.69■■■□□ 2.34
TRIM59Q8IWR1 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC29.69■■■□□ 2.34
TRIM59Q8IWR1 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
TRIM59Q8IWR1 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
TRIM59Q8IWR1 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
TRIM59Q8IWR1 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC29.64■■■□□ 2.33
TRIM59Q8IWR1 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
TRIM59Q8IWR1 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
TRIM59Q8IWR1 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC29.6■■■□□ 2.33
TRIM59Q8IWR1 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
TRIM59Q8IWR1 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC29.57■■■□□ 2.32
TRIM59Q8IWR1 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC29.56■■■□□ 2.32
TRIM59Q8IWR1 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC29.54■■■□□ 2.32
TRIM59Q8IWR1 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
TRIM59Q8IWR1 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
TRIM59Q8IWR1 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC29.52■■■□□ 2.32
TRIM59Q8IWR1 KLF16-203ENST00000592313 508 ntTSL 3 BASIC29.52■■■□□ 2.32
TRIM59Q8IWR1 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC29.52■■■□□ 2.32
TRIM59Q8IWR1 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
TRIM59Q8IWR1 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC29.51■■■□□ 2.31
TRIM59Q8IWR1 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC29.5■■■□□ 2.31
TRIM59Q8IWR1 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC29.49■■■□□ 2.31
TRIM59Q8IWR1 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
TRIM59Q8IWR1 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC29.46■■■□□ 2.31
TRIM59Q8IWR1 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
TRIM59Q8IWR1 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
TRIM59Q8IWR1 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC29.44■■■□□ 2.3
TRIM59Q8IWR1 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
TRIM59Q8IWR1 AL161658.1-201ENST00000623641 1967 ntBASIC29.44■■■□□ 2.3
TRIM59Q8IWR1 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC29.44■■■□□ 2.3
TRIM59Q8IWR1 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC29.43■■■□□ 2.3
TRIM59Q8IWR1 ABCB10P1-201ENST00000614297 2181 ntBASIC29.43■■■□□ 2.3
TRIM59Q8IWR1 AL133380.1-201ENST00000506013 324 ntBASIC29.4■■■□□ 2.3
TRIM59Q8IWR1 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC29.4■■■□□ 2.3
TRIM59Q8IWR1 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
TRIM59Q8IWR1 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC29.4■■■□□ 2.3
TRIM59Q8IWR1 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
TRIM59Q8IWR1 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC29.39■■■□□ 2.3
TRIM59Q8IWR1 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC29.39■■■□□ 2.3
TRIM59Q8IWR1 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC29.38■■■□□ 2.29
TRIM59Q8IWR1 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
TRIM59Q8IWR1 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC29.37■■■□□ 2.29
TRIM59Q8IWR1 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC29.37■■■□□ 2.29
TRIM59Q8IWR1 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
TRIM59Q8IWR1 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC29.36■■■□□ 2.29
TRIM59Q8IWR1 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
TRIM59Q8IWR1 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC29.34■■■□□ 2.29
TRIM59Q8IWR1 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC29.34■■■□□ 2.29
TRIM59Q8IWR1 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
TRIM59Q8IWR1 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
TRIM59Q8IWR1 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
TRIM59Q8IWR1 WASH5P-204ENST00000632292 975 ntBASIC29.32■■■□□ 2.28
TRIM59Q8IWR1 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
TRIM59Q8IWR1 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC29.31■■■□□ 2.28
TRIM59Q8IWR1 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
TRIM59Q8IWR1 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
TRIM59Q8IWR1 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC29.29■■■□□ 2.28
TRIM59Q8IWR1 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
TRIM59Q8IWR1 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC29.27■■■□□ 2.28
TRIM59Q8IWR1 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC29.27■■■□□ 2.28
TRIM59Q8IWR1 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC29.27■■■□□ 2.28
TRIM59Q8IWR1 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC29.26■■■□□ 2.27
TRIM59Q8IWR1 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
TRIM59Q8IWR1 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC29.25■■■□□ 2.27
TRIM59Q8IWR1 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC29.25■■■□□ 2.27
TRIM59Q8IWR1 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
TRIM59Q8IWR1 RARRES2P7-201ENST00000567349 469 ntBASIC29.22■■■□□ 2.27
TRIM59Q8IWR1 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
TRIM59Q8IWR1 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC29.21■■■□□ 2.27
TRIM59Q8IWR1 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC29.21■■■□□ 2.27
TRIM59Q8IWR1 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC29.21■■■□□ 2.27
TRIM59Q8IWR1 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
TRIM59Q8IWR1 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.27
TRIM59Q8IWR1 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC29.2■■■□□ 2.26
TRIM59Q8IWR1 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC29.2■■■□□ 2.26
TRIM59Q8IWR1 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
TRIM59Q8IWR1 ST7-AS1-201ENST00000456775 1889 ntBASIC29.19■■■□□ 2.26
TRIM59Q8IWR1 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
TRIM59Q8IWR1 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
TRIM59Q8IWR1 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
TRIM59Q8IWR1 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC29.18■■■□□ 2.26
TRIM59Q8IWR1 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC29.17■■■□□ 2.26
TRIM59Q8IWR1 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
TRIM59Q8IWR1 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
TRIM59Q8IWR1 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
TRIM59Q8IWR1 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
TRIM59Q8IWR1 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
TRIM59Q8IWR1 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC29.15■■■□□ 2.26
TRIM59Q8IWR1 SETD8P1-201ENST00000623146 1180 ntBASIC29.15■■■□□ 2.26
TRIM59Q8IWR1 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC29.15■■■□□ 2.26
TRIM59Q8IWR1 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC29.15■■■□□ 2.26
TRIM59Q8IWR1 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
TRIM59Q8IWR1 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
TRIM59Q8IWR1 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
TRIM59Q8IWR1 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
TRIM59Q8IWR1 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC29.14■■■□□ 2.25
TRIM59Q8IWR1 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms