Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC28.97■■■□□ 2.23
RNF135Q8IUD6 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
RNF135Q8IUD6 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC28.97■■■□□ 2.23
RNF135Q8IUD6 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC28.96■■■□□ 2.23
RNF135Q8IUD6 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
RNF135Q8IUD6 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC28.94■■■□□ 2.22
RNF135Q8IUD6 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
RNF135Q8IUD6 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC28.92■■■□□ 2.22
RNF135Q8IUD6 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
RNF135Q8IUD6 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
RNF135Q8IUD6 RPS2-202ENST00000526522 924 ntTSL 2 BASIC28.92■■■□□ 2.22
RNF135Q8IUD6 HGH1-207ENST00000628266 258 ntTSL 5 BASIC28.92■■■□□ 2.22
RNF135Q8IUD6 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
RNF135Q8IUD6 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
RNF135Q8IUD6 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC28.89■■■□□ 2.22
RNF135Q8IUD6 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC28.89■■■□□ 2.22
RNF135Q8IUD6 MIR4449-201ENST00000578365 66 ntBASIC28.89■■■□□ 2.22
RNF135Q8IUD6 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC28.89■■■□□ 2.22
RNF135Q8IUD6 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
RNF135Q8IUD6 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
RNF135Q8IUD6 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
RNF135Q8IUD6 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC28.83■■■□□ 2.21
RNF135Q8IUD6 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC28.82■■■□□ 2.2
RNF135Q8IUD6 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
RNF135Q8IUD6 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC28.82■■■□□ 2.2
RNF135Q8IUD6 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC28.81■■■□□ 2.2
RNF135Q8IUD6 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC28.8■■■□□ 2.2
RNF135Q8IUD6 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
RNF135Q8IUD6 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC28.79■■■□□ 2.2
RNF135Q8IUD6 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
RNF135Q8IUD6 DENR-202ENST00000455982 1052 ntTSL 5 BASIC28.76■■■□□ 2.19
RNF135Q8IUD6 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
RNF135Q8IUD6 MIR639-201ENST00000384974 98 ntBASIC28.75■■■□□ 2.19
RNF135Q8IUD6 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC28.75■■■□□ 2.19
RNF135Q8IUD6 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC28.74■■■□□ 2.19
RNF135Q8IUD6 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
RNF135Q8IUD6 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
RNF135Q8IUD6 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
RNF135Q8IUD6 DUX4L29-201ENST00000425409 679 ntBASIC28.7■■■□□ 2.18
RNF135Q8IUD6 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC28.69■■■□□ 2.18
RNF135Q8IUD6 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
RNF135Q8IUD6 HSD17B1P1-201ENST00000590052 955 ntBASIC28.65■■■□□ 2.18
RNF135Q8IUD6 MACF1-219ENST00000484793 834 ntTSL 2 BASIC28.64■■■□□ 2.18
RNF135Q8IUD6 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
RNF135Q8IUD6 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
RNF135Q8IUD6 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC28.63■■■□□ 2.17
RNF135Q8IUD6 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC28.63■■■□□ 2.17
RNF135Q8IUD6 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC28.63■■■□□ 2.17
RNF135Q8IUD6 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
RNF135Q8IUD6 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
RNF135Q8IUD6 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
RNF135Q8IUD6 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
RNF135Q8IUD6 CALM3-209ENST00000597743 577 ntTSL 4 BASIC28.62■■■□□ 2.17
RNF135Q8IUD6 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
RNF135Q8IUD6 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC28.61■■■□□ 2.17
RNF135Q8IUD6 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC28.6■■■□□ 2.17
RNF135Q8IUD6 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC28.59■■■□□ 2.17
RNF135Q8IUD6 RPS2-209ENST00000529806 993 ntTSL 3 BASIC28.57■■■□□ 2.16
RNF135Q8IUD6 BRD4-212ENST00000630599 726 ntTSL 2 BASIC28.57■■■□□ 2.16
RNF135Q8IUD6 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC28.57■■■□□ 2.16
RNF135Q8IUD6 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
RNF135Q8IUD6 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC28.56■■■□□ 2.16
RNF135Q8IUD6 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
RNF135Q8IUD6 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
RNF135Q8IUD6 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
RNF135Q8IUD6 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC28.54■■■□□ 2.16
RNF135Q8IUD6 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
RNF135Q8IUD6 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC28.53■■■□□ 2.16
RNF135Q8IUD6 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
RNF135Q8IUD6 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC28.53■■■□□ 2.16
RNF135Q8IUD6 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
RNF135Q8IUD6 AC021231.2-201ENST00000594613 730 ntBASIC28.52■■■□□ 2.16
RNF135Q8IUD6 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
RNF135Q8IUD6 AC016575.1-201ENST00000607026 382 ntBASIC28.51■■■□□ 2.15
RNF135Q8IUD6 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
RNF135Q8IUD6 MIR3648-2-201ENST00000581792 180 ntBASIC28.5■■■□□ 2.15
RNF135Q8IUD6 MIR3648-1-201ENST00000615959 180 ntBASIC28.5■■■□□ 2.15
RNF135Q8IUD6 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
RNF135Q8IUD6 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC28.49■■■□□ 2.15
RNF135Q8IUD6 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC28.49■■■□□ 2.15
RNF135Q8IUD6 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC28.48■■■□□ 2.15
RNF135Q8IUD6 RNF166-209ENST00000567844 633 ntTSL 5 BASIC28.48■■■□□ 2.15
RNF135Q8IUD6 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
RNF135Q8IUD6 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC28.47■■■□□ 2.15
RNF135Q8IUD6 GDI1-215ENST00000630693 786 ntTSL 4 BASIC28.47■■■□□ 2.15
RNF135Q8IUD6 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
RNF135Q8IUD6 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
RNF135Q8IUD6 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC28.44■■■□□ 2.14
RNF135Q8IUD6 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC28.44■■■□□ 2.14
RNF135Q8IUD6 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
RNF135Q8IUD6 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC28.43■■■□□ 2.14
RNF135Q8IUD6 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
RNF135Q8IUD6 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
RNF135Q8IUD6 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
RNF135Q8IUD6 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC28.41■■■□□ 2.14
RNF135Q8IUD6 WASH5P-204ENST00000632292 975 ntBASIC28.41■■■□□ 2.14
RNF135Q8IUD6 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
RNF135Q8IUD6 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
RNF135Q8IUD6 CIB2-204ENST00000557846 934 ntTSL 3 BASIC28.38■■■□□ 2.13
RNF135Q8IUD6 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms