Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC33.78■■■■□ 3
CHD1LQ86WJ1 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC33.78■■■■□ 3
CHD1LQ86WJ1 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC33.78■■■■□ 3
CHD1LQ86WJ1 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC33.76■■■□□ 2.99
CHD1LQ86WJ1 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
CHD1LQ86WJ1 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC33.71■■■□□ 2.99
CHD1LQ86WJ1 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC33.71■■■□□ 2.99
CHD1LQ86WJ1 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC33.71■■■□□ 2.99
CHD1LQ86WJ1 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC33.69■■■□□ 2.98
CHD1LQ86WJ1 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC33.66■■■□□ 2.98
CHD1LQ86WJ1 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
CHD1LQ86WJ1 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC33.64■■■□□ 2.98
CHD1LQ86WJ1 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC33.64■■■□□ 2.98
CHD1LQ86WJ1 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC33.63■■■□□ 2.97
CHD1LQ86WJ1 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC33.6■■■□□ 2.97
CHD1LQ86WJ1 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC33.6■■■□□ 2.97
CHD1LQ86WJ1 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
CHD1LQ86WJ1 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC33.55■■■□□ 2.96
CHD1LQ86WJ1 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.96
CHD1LQ86WJ1 ABCB10P1-201ENST00000614297 2181 ntBASIC33.54■■■□□ 2.96
CHD1LQ86WJ1 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC33.54■■■□□ 2.96
CHD1LQ86WJ1 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC33.53■■■□□ 2.96
CHD1LQ86WJ1 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
CHD1LQ86WJ1 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC33.51■■■□□ 2.95
CHD1LQ86WJ1 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC33.5■■■□□ 2.95
CHD1LQ86WJ1 AL161658.1-201ENST00000623641 1967 ntBASIC33.48■■■□□ 2.95
CHD1LQ86WJ1 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
CHD1LQ86WJ1 KLF16-203ENST00000592313 508 ntTSL 3 BASIC33.47■■■□□ 2.95
CHD1LQ86WJ1 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC33.46■■■□□ 2.95
CHD1LQ86WJ1 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC33.46■■■□□ 2.95
CHD1LQ86WJ1 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC33.46■■■□□ 2.95
CHD1LQ86WJ1 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC33.45■■■□□ 2.95
CHD1LQ86WJ1 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC33.45■■■□□ 2.95
CHD1LQ86WJ1 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC33.44■■■□□ 2.94
CHD1LQ86WJ1 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC33.44■■■□□ 2.94
CHD1LQ86WJ1 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC33.44■■■□□ 2.94
CHD1LQ86WJ1 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC33.43■■■□□ 2.94
CHD1LQ86WJ1 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC33.43■■■□□ 2.94
CHD1LQ86WJ1 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC33.42■■■□□ 2.94
CHD1LQ86WJ1 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
CHD1LQ86WJ1 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC33.42■■■□□ 2.94
CHD1LQ86WJ1 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC33.42■■■□□ 2.94
CHD1LQ86WJ1 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
CHD1LQ86WJ1 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC33.41■■■□□ 2.94
CHD1LQ86WJ1 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC33.39■■■□□ 2.94
CHD1LQ86WJ1 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
CHD1LQ86WJ1 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC33.37■■■□□ 2.93
CHD1LQ86WJ1 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC33.37■■■□□ 2.93
CHD1LQ86WJ1 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC33.35■■■□□ 2.93
CHD1LQ86WJ1 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC33.34■■■□□ 2.93
CHD1LQ86WJ1 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC33.34■■■□□ 2.93
CHD1LQ86WJ1 AL133380.1-201ENST00000506013 324 ntBASIC33.34■■■□□ 2.93
CHD1LQ86WJ1 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
CHD1LQ86WJ1 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
CHD1LQ86WJ1 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.93
CHD1LQ86WJ1 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.93
CHD1LQ86WJ1 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC33.32■■■□□ 2.92
CHD1LQ86WJ1 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC33.31■■■□□ 2.92
CHD1LQ86WJ1 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC33.31■■■□□ 2.92
CHD1LQ86WJ1 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC33.3■■■□□ 2.92
CHD1LQ86WJ1 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC33.29■■■□□ 2.92
CHD1LQ86WJ1 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC33.29■■■□□ 2.92
CHD1LQ86WJ1 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC33.28■■■□□ 2.92
CHD1LQ86WJ1 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
CHD1LQ86WJ1 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
CHD1LQ86WJ1 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC33.27■■■□□ 2.92
CHD1LQ86WJ1 WASH5P-204ENST00000632292 975 ntBASIC33.27■■■□□ 2.92
CHD1LQ86WJ1 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
CHD1LQ86WJ1 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
CHD1LQ86WJ1 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC33.25■■■□□ 2.91
CHD1LQ86WJ1 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC33.25■■■□□ 2.91
CHD1LQ86WJ1 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
CHD1LQ86WJ1 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC33.24■■■□□ 2.91
CHD1LQ86WJ1 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC33.24■■■□□ 2.91
CHD1LQ86WJ1 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC33.23■■■□□ 2.91
CHD1LQ86WJ1 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
CHD1LQ86WJ1 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
CHD1LQ86WJ1 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
CHD1LQ86WJ1 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
CHD1LQ86WJ1 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
CHD1LQ86WJ1 ST7-AS1-201ENST00000456775 1889 ntBASIC33.2■■■□□ 2.9
CHD1LQ86WJ1 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC33.2■■■□□ 2.9
CHD1LQ86WJ1 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC33.2■■■□□ 2.9
CHD1LQ86WJ1 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
CHD1LQ86WJ1 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
CHD1LQ86WJ1 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC33.17■■■□□ 2.9
CHD1LQ86WJ1 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
CHD1LQ86WJ1 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
CHD1LQ86WJ1 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC33.16■■■□□ 2.9
CHD1LQ86WJ1 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
CHD1LQ86WJ1 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
CHD1LQ86WJ1 ABCB10P3-201ENST00000561950 2166 ntBASIC33.14■■■□□ 2.9
CHD1LQ86WJ1 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC33.14■■■□□ 2.9
CHD1LQ86WJ1 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
CHD1LQ86WJ1 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC33.14■■■□□ 2.9
CHD1LQ86WJ1 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
CHD1LQ86WJ1 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
CHD1LQ86WJ1 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
CHD1LQ86WJ1 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
CHD1LQ86WJ1 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC33.12■■■□□ 2.89
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms