Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.03■■□□□ 1.76
RNF44Q7L0R7 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC26.03■■□□□ 1.76
RNF44Q7L0R7 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
RNF44Q7L0R7 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
RNF44Q7L0R7 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RNF44Q7L0R7 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RNF44Q7L0R7 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RNF44Q7L0R7 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
RNF44Q7L0R7 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
RNF44Q7L0R7 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC25.99■■□□□ 1.75
RNF44Q7L0R7 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RNF44Q7L0R7 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
RNF44Q7L0R7 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
RNF44Q7L0R7 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC25.97■■□□□ 1.75
RNF44Q7L0R7 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
RNF44Q7L0R7 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.75
RNF44Q7L0R7 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
RNF44Q7L0R7 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
RNF44Q7L0R7 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RNF44Q7L0R7 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RNF44Q7L0R7 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
RNF44Q7L0R7 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC25.91■■□□□ 1.74
RNF44Q7L0R7 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
RNF44Q7L0R7 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
RNF44Q7L0R7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
RNF44Q7L0R7 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RNF44Q7L0R7 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RNF44Q7L0R7 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RNF44Q7L0R7 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC25.86■■□□□ 1.73
RNF44Q7L0R7 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RNF44Q7L0R7 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
RNF44Q7L0R7 DENR-202ENST00000455982 1052 ntTSL 5 BASIC25.86■■□□□ 1.73
RNF44Q7L0R7 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
RNF44Q7L0R7 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
RNF44Q7L0R7 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RNF44Q7L0R7 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
RNF44Q7L0R7 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RNF44Q7L0R7 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC25.83■■□□□ 1.73
RNF44Q7L0R7 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RNF44Q7L0R7 HNRNPLP2-201ENST00000568980 1570 ntBASIC25.82■■□□□ 1.72
RNF44Q7L0R7 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RNF44Q7L0R7 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
RNF44Q7L0R7 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC25.79■■□□□ 1.72
RNF44Q7L0R7 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
RNF44Q7L0R7 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
RNF44Q7L0R7 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC25.76■■□□□ 1.71
RNF44Q7L0R7 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
RNF44Q7L0R7 MIR762-201ENST00000390236 83 ntBASIC25.75■■□□□ 1.71
RNF44Q7L0R7 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
RNF44Q7L0R7 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
RNF44Q7L0R7 AP006261.1-201ENST00000584783 668 ntBASIC25.73■■□□□ 1.71
RNF44Q7L0R7 CHML-205ENST00000638160 705 ntTSL 3 BASIC25.73■■□□□ 1.71
RNF44Q7L0R7 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RNF44Q7L0R7 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RNF44Q7L0R7 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
RNF44Q7L0R7 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
RNF44Q7L0R7 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC25.7■■□□□ 1.7
RNF44Q7L0R7 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RNF44Q7L0R7 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
RNF44Q7L0R7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
RNF44Q7L0R7 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RNF44Q7L0R7 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RNF44Q7L0R7 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RNF44Q7L0R7 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
RNF44Q7L0R7 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RNF44Q7L0R7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC25.67■■□□□ 1.7
RNF44Q7L0R7 NRG1-221ENST00000614767 762 ntTSL 5 BASIC25.67■■□□□ 1.7
RNF44Q7L0R7 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RNF44Q7L0R7 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
RNF44Q7L0R7 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RNF44Q7L0R7 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC25.66■■□□□ 1.7
RNF44Q7L0R7 AL162393.1-201ENST00000437852 946 ntBASIC25.66■■□□□ 1.7
RNF44Q7L0R7 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC25.65■■□□□ 1.7
RNF44Q7L0R7 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
RNF44Q7L0R7 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
RNF44Q7L0R7 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
RNF44Q7L0R7 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC25.64■■□□□ 1.7
RNF44Q7L0R7 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC25.64■■□□□ 1.69
RNF44Q7L0R7 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
RNF44Q7L0R7 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.64■■□□□ 1.69
RNF44Q7L0R7 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC25.63■■□□□ 1.69
RNF44Q7L0R7 AC005559.1-201ENST00000589661 871 ntBASIC25.63■■□□□ 1.69
RNF44Q7L0R7 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
RNF44Q7L0R7 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
RNF44Q7L0R7 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
RNF44Q7L0R7 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC25.62■■□□□ 1.69
RNF44Q7L0R7 MIR3665-201ENST00000578708 105 ntBASIC25.62■■□□□ 1.69
RNF44Q7L0R7 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RNF44Q7L0R7 DUX4L28-201ENST00000623687 678 ntBASIC25.61■■□□□ 1.69
RNF44Q7L0R7 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
RNF44Q7L0R7 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RNF44Q7L0R7 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
RNF44Q7L0R7 AL161658.1-201ENST00000623641 1967 ntBASIC25.6■■□□□ 1.69
RNF44Q7L0R7 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC25.6■■□□□ 1.69
RNF44Q7L0R7 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
RNF44Q7L0R7 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RNF44Q7L0R7 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
RNF44Q7L0R7 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC25.59■■□□□ 1.69
RNF44Q7L0R7 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
RNF44Q7L0R7 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms