Protein–RNA interactions for Protein: Q6ZST4

LCNL1, Lipocalin-like 1 protein, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCNL1Q6ZST4 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LCNL1Q6ZST4 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LCNL1Q6ZST4 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LCNL1Q6ZST4 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.25■□□□□ 0.99
LCNL1Q6ZST4 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LCNL1Q6ZST4 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LCNL1Q6ZST4 WASH5P-204ENST00000632292 975 ntBASIC21.23■□□□□ 0.99
LCNL1Q6ZST4 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LCNL1Q6ZST4 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
LCNL1Q6ZST4 AC120057.4-201ENST00000624722 1615 ntBASIC21.22■□□□□ 0.99
LCNL1Q6ZST4 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
LCNL1Q6ZST4 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
LCNL1Q6ZST4 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LCNL1Q6ZST4 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC21.21■□□□□ 0.99
LCNL1Q6ZST4 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LCNL1Q6ZST4 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC21.2■□□□□ 0.98
LCNL1Q6ZST4 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LCNL1Q6ZST4 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.19■□□□□ 0.98
LCNL1Q6ZST4 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LCNL1Q6ZST4 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LCNL1Q6ZST4 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LCNL1Q6ZST4 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LCNL1Q6ZST4 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LCNL1Q6ZST4 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
LCNL1Q6ZST4 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LCNL1Q6ZST4 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LCNL1Q6ZST4 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.14■□□□□ 0.97
LCNL1Q6ZST4 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
LCNL1Q6ZST4 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
LCNL1Q6ZST4 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LCNL1Q6ZST4 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.13■□□□□ 0.97
LCNL1Q6ZST4 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LCNL1Q6ZST4 RPS2P35-201ENST00000443417 897 ntBASIC21.12■□□□□ 0.97
LCNL1Q6ZST4 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.12■□□□□ 0.97
LCNL1Q6ZST4 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LCNL1Q6ZST4 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.1■□□□□ 0.97
LCNL1Q6ZST4 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LCNL1Q6ZST4 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LCNL1Q6ZST4 MIR762-201ENST00000390236 83 ntBASIC21.07■□□□□ 0.96
LCNL1Q6ZST4 AL162393.1-201ENST00000437852 946 ntBASIC21.07■□□□□ 0.96
LCNL1Q6ZST4 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.07■□□□□ 0.96
LCNL1Q6ZST4 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.06■□□□□ 0.96
LCNL1Q6ZST4 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LCNL1Q6ZST4 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LCNL1Q6ZST4 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC21.05■□□□□ 0.96
LCNL1Q6ZST4 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LCNL1Q6ZST4 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
LCNL1Q6ZST4 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LCNL1Q6ZST4 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LCNL1Q6ZST4 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LCNL1Q6ZST4 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.03■□□□□ 0.96
LCNL1Q6ZST4 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LCNL1Q6ZST4 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.03■□□□□ 0.96
LCNL1Q6ZST4 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LCNL1Q6ZST4 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LCNL1Q6ZST4 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
LCNL1Q6ZST4 AP006261.1-201ENST00000584783 668 ntBASIC21.02■□□□□ 0.96
LCNL1Q6ZST4 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LCNL1Q6ZST4 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
LCNL1Q6ZST4 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.01■□□□□ 0.95
LCNL1Q6ZST4 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC21■□□□□ 0.95
LCNL1Q6ZST4 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC21■□□□□ 0.95
LCNL1Q6ZST4 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LCNL1Q6ZST4 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC21■□□□□ 0.95
LCNL1Q6ZST4 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21■□□□□ 0.95
LCNL1Q6ZST4 DUX4L28-201ENST00000623687 678 ntBASIC20.99■□□□□ 0.95
LCNL1Q6ZST4 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LCNL1Q6ZST4 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LCNL1Q6ZST4 AC005559.1-201ENST00000589661 871 ntBASIC20.98■□□□□ 0.95
LCNL1Q6ZST4 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LCNL1Q6ZST4 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
LCNL1Q6ZST4 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LCNL1Q6ZST4 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LCNL1Q6ZST4 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LCNL1Q6ZST4 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.95
LCNL1Q6ZST4 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
LCNL1Q6ZST4 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LCNL1Q6ZST4 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
LCNL1Q6ZST4 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
LCNL1Q6ZST4 MIR3665-201ENST00000578708 105 ntBASIC20.94■□□□□ 0.94
LCNL1Q6ZST4 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LCNL1Q6ZST4 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
LCNL1Q6ZST4 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LCNL1Q6ZST4 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.93■□□□□ 0.94
LCNL1Q6ZST4 AL161658.1-201ENST00000623641 1967 ntBASIC20.93■□□□□ 0.94
LCNL1Q6ZST4 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LCNL1Q6ZST4 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LCNL1Q6ZST4 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LCNL1Q6ZST4 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LCNL1Q6ZST4 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
LCNL1Q6ZST4 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LCNL1Q6ZST4 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.91■□□□□ 0.94
LCNL1Q6ZST4 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
LCNL1Q6ZST4 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
LCNL1Q6ZST4 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LCNL1Q6ZST4 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LCNL1Q6ZST4 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.89■□□□□ 0.94
LCNL1Q6ZST4 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LCNL1Q6ZST4 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LCNL1Q6ZST4 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms