Protein–RNA interactions for Protein: Q6PJQ5

FOXR2, Forkhead box protein R2, humanhuman

Predictions only

Length 311 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR2Q6PJQ5 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC29.9■■■□□ 2.38
FOXR2Q6PJQ5 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
FOXR2Q6PJQ5 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
FOXR2Q6PJQ5 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC29.86■■■□□ 2.37
FOXR2Q6PJQ5 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC29.86■■■□□ 2.37
FOXR2Q6PJQ5 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC29.86■■■□□ 2.37
FOXR2Q6PJQ5 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC29.84■■■□□ 2.37
FOXR2Q6PJQ5 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC29.83■■■□□ 2.37
FOXR2Q6PJQ5 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC29.82■■■□□ 2.36
FOXR2Q6PJQ5 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC29.8■■■□□ 2.36
FOXR2Q6PJQ5 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC29.78■■■□□ 2.36
FOXR2Q6PJQ5 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC29.77■■■□□ 2.36
FOXR2Q6PJQ5 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC29.77■■■□□ 2.36
FOXR2Q6PJQ5 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC29.77■■■□□ 2.36
FOXR2Q6PJQ5 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
FOXR2Q6PJQ5 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
FOXR2Q6PJQ5 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
FOXR2Q6PJQ5 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC29.74■■■□□ 2.35
FOXR2Q6PJQ5 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
FOXR2Q6PJQ5 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
FOXR2Q6PJQ5 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
FOXR2Q6PJQ5 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC29.7■■■□□ 2.35
FOXR2Q6PJQ5 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
FOXR2Q6PJQ5 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC29.68■■■□□ 2.34
FOXR2Q6PJQ5 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC29.68■■■□□ 2.34
FOXR2Q6PJQ5 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
FOXR2Q6PJQ5 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC29.66■■■□□ 2.34
FOXR2Q6PJQ5 KLF16-203ENST00000592313 508 ntTSL 3 BASIC29.66■■■□□ 2.34
FOXR2Q6PJQ5 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC29.66■■■□□ 2.34
FOXR2Q6PJQ5 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC29.65■■■□□ 2.34
FOXR2Q6PJQ5 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
FOXR2Q6PJQ5 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
FOXR2Q6PJQ5 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC29.63■■■□□ 2.33
FOXR2Q6PJQ5 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
FOXR2Q6PJQ5 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
FOXR2Q6PJQ5 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC29.62■■■□□ 2.33
FOXR2Q6PJQ5 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
FOXR2Q6PJQ5 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC29.6■■■□□ 2.33
FOXR2Q6PJQ5 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC29.59■■■□□ 2.33
FOXR2Q6PJQ5 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
FOXR2Q6PJQ5 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC29.59■■■□□ 2.33
FOXR2Q6PJQ5 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
FOXR2Q6PJQ5 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC29.59■■■□□ 2.33
FOXR2Q6PJQ5 AL161658.1-201ENST00000623641 1967 ntBASIC29.59■■■□□ 2.33
FOXR2Q6PJQ5 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC29.58■■■□□ 2.33
FOXR2Q6PJQ5 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
FOXR2Q6PJQ5 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
FOXR2Q6PJQ5 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC29.57■■■□□ 2.32
FOXR2Q6PJQ5 AL133380.1-201ENST00000506013 324 ntBASIC29.57■■■□□ 2.32
FOXR2Q6PJQ5 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
FOXR2Q6PJQ5 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC29.55■■■□□ 2.32
FOXR2Q6PJQ5 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
FOXR2Q6PJQ5 WASH5P-204ENST00000632292 975 ntBASIC29.54■■■□□ 2.32
FOXR2Q6PJQ5 ABCB10P1-201ENST00000614297 2181 ntBASIC29.54■■■□□ 2.32
FOXR2Q6PJQ5 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
FOXR2Q6PJQ5 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
FOXR2Q6PJQ5 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC29.51■■■□□ 2.31
FOXR2Q6PJQ5 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
FOXR2Q6PJQ5 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
FOXR2Q6PJQ5 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC29.49■■■□□ 2.31
FOXR2Q6PJQ5 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
FOXR2Q6PJQ5 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
FOXR2Q6PJQ5 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
FOXR2Q6PJQ5 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
FOXR2Q6PJQ5 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
FOXR2Q6PJQ5 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC29.46■■■□□ 2.31
FOXR2Q6PJQ5 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC29.46■■■□□ 2.31
FOXR2Q6PJQ5 ST7-AS1-201ENST00000456775 1889 ntBASIC29.45■■■□□ 2.31
FOXR2Q6PJQ5 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
FOXR2Q6PJQ5 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC29.45■■■□□ 2.3
FOXR2Q6PJQ5 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
FOXR2Q6PJQ5 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
FOXR2Q6PJQ5 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
FOXR2Q6PJQ5 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC29.44■■■□□ 2.3
FOXR2Q6PJQ5 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC29.44■■■□□ 2.3
FOXR2Q6PJQ5 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
FOXR2Q6PJQ5 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC29.43■■■□□ 2.3
FOXR2Q6PJQ5 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC29.43■■■□□ 2.3
FOXR2Q6PJQ5 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC29.42■■■□□ 2.3
FOXR2Q6PJQ5 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
FOXR2Q6PJQ5 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
FOXR2Q6PJQ5 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC29.4■■■□□ 2.3
FOXR2Q6PJQ5 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
FOXR2Q6PJQ5 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
FOXR2Q6PJQ5 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
FOXR2Q6PJQ5 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
FOXR2Q6PJQ5 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
FOXR2Q6PJQ5 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC29.37■■■□□ 2.29
FOXR2Q6PJQ5 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
FOXR2Q6PJQ5 AL135925.1-201ENST00000605920 1701 ntBASIC29.37■■■□□ 2.29
FOXR2Q6PJQ5 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC29.36■■■□□ 2.29
FOXR2Q6PJQ5 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC29.36■■■□□ 2.29
FOXR2Q6PJQ5 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
FOXR2Q6PJQ5 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
FOXR2Q6PJQ5 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC29.34■■■□□ 2.29
FOXR2Q6PJQ5 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC29.34■■■□□ 2.29
FOXR2Q6PJQ5 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC29.32■■■□□ 2.28
FOXR2Q6PJQ5 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC29.32■■■□□ 2.28
FOXR2Q6PJQ5 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
FOXR2Q6PJQ5 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC29.31■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms