Protein–RNA interactions for Protein: Q6PJ69

TRIM65, Tripartite motif-containing protein 65, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65Q6PJ69 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC29.86■■■□□ 2.37
TRIM65Q6PJ69 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
TRIM65Q6PJ69 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC29.85■■■□□ 2.37
TRIM65Q6PJ69 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
TRIM65Q6PJ69 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
TRIM65Q6PJ69 AC120057.4-201ENST00000624722 1615 ntBASIC29.84■■■□□ 2.37
TRIM65Q6PJ69 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
TRIM65Q6PJ69 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
TRIM65Q6PJ69 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC29.82■■■□□ 2.36
TRIM65Q6PJ69 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
TRIM65Q6PJ69 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC29.81■■■□□ 2.36
TRIM65Q6PJ69 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC29.81■■■□□ 2.36
TRIM65Q6PJ69 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC29.81■■■□□ 2.36
TRIM65Q6PJ69 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC29.8■■■□□ 2.36
TRIM65Q6PJ69 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
TRIM65Q6PJ69 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
TRIM65Q6PJ69 SHF-206ENST00000560471 2499 ntTSL 5 BASIC29.79■■■□□ 2.36
TRIM65Q6PJ69 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC29.78■■■□□ 2.36
TRIM65Q6PJ69 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
TRIM65Q6PJ69 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC29.77■■■□□ 2.36
TRIM65Q6PJ69 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC29.77■■■□□ 2.36
TRIM65Q6PJ69 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
TRIM65Q6PJ69 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC29.76■■■□□ 2.35
TRIM65Q6PJ69 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.35
TRIM65Q6PJ69 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
TRIM65Q6PJ69 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC29.75■■■□□ 2.35
TRIM65Q6PJ69 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
TRIM65Q6PJ69 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
TRIM65Q6PJ69 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
TRIM65Q6PJ69 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
TRIM65Q6PJ69 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
TRIM65Q6PJ69 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
TRIM65Q6PJ69 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
TRIM65Q6PJ69 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC29.68■■■□□ 2.34
TRIM65Q6PJ69 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
TRIM65Q6PJ69 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
TRIM65Q6PJ69 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC29.63■■■□□ 2.33
TRIM65Q6PJ69 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC29.63■■■□□ 2.33
TRIM65Q6PJ69 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
TRIM65Q6PJ69 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC29.61■■■□□ 2.33
TRIM65Q6PJ69 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC29.61■■■□□ 2.33
TRIM65Q6PJ69 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
TRIM65Q6PJ69 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC29.61■■■□□ 2.33
TRIM65Q6PJ69 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
TRIM65Q6PJ69 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
TRIM65Q6PJ69 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC29.6■■■□□ 2.33
TRIM65Q6PJ69 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC29.6■■■□□ 2.33
TRIM65Q6PJ69 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC29.59■■■□□ 2.33
TRIM65Q6PJ69 AC139426.1-201ENST00000568218 2529 ntBASIC29.59■■■□□ 2.33
TRIM65Q6PJ69 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC29.59■■■□□ 2.33
TRIM65Q6PJ69 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC29.59■■■□□ 2.33
TRIM65Q6PJ69 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
TRIM65Q6PJ69 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC29.57■■■□□ 2.32
TRIM65Q6PJ69 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
TRIM65Q6PJ69 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
TRIM65Q6PJ69 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC29.55■■■□□ 2.32
TRIM65Q6PJ69 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC29.54■■■□□ 2.32
TRIM65Q6PJ69 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
TRIM65Q6PJ69 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC29.53■■■□□ 2.32
TRIM65Q6PJ69 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
TRIM65Q6PJ69 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC29.52■■■□□ 2.32
TRIM65Q6PJ69 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
TRIM65Q6PJ69 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
TRIM65Q6PJ69 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
TRIM65Q6PJ69 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC29.48■■■□□ 2.31
TRIM65Q6PJ69 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC29.48■■■□□ 2.31
TRIM65Q6PJ69 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC29.47■■■□□ 2.31
TRIM65Q6PJ69 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
TRIM65Q6PJ69 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC29.47■■■□□ 2.31
TRIM65Q6PJ69 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
TRIM65Q6PJ69 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
TRIM65Q6PJ69 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
TRIM65Q6PJ69 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC29.44■■■□□ 2.3
TRIM65Q6PJ69 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC29.43■■■□□ 2.3
TRIM65Q6PJ69 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC29.43■■■□□ 2.3
TRIM65Q6PJ69 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
TRIM65Q6PJ69 AL161658.1-201ENST00000623641 1967 ntBASIC29.41■■■□□ 2.3
TRIM65Q6PJ69 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC29.39■■■□□ 2.3
TRIM65Q6PJ69 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
TRIM65Q6PJ69 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC29.36■■■□□ 2.29
TRIM65Q6PJ69 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC29.36■■■□□ 2.29
TRIM65Q6PJ69 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
TRIM65Q6PJ69 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC29.35■■■□□ 2.29
TRIM65Q6PJ69 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC29.34■■■□□ 2.29
TRIM65Q6PJ69 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC29.34■■■□□ 2.29
TRIM65Q6PJ69 KLF16-203ENST00000592313 508 ntTSL 3 BASIC29.34■■■□□ 2.29
TRIM65Q6PJ69 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
TRIM65Q6PJ69 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC29.32■■■□□ 2.28
TRIM65Q6PJ69 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
TRIM65Q6PJ69 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC29.32■■■□□ 2.28
TRIM65Q6PJ69 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC29.31■■■□□ 2.28
TRIM65Q6PJ69 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
TRIM65Q6PJ69 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC29.3■■■□□ 2.28
TRIM65Q6PJ69 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
TRIM65Q6PJ69 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
TRIM65Q6PJ69 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
TRIM65Q6PJ69 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC29.28■■■□□ 2.28
TRIM65Q6PJ69 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
TRIM65Q6PJ69 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC29.26■■■□□ 2.27
TRIM65Q6PJ69 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC29.26■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms