Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC26.25■■□□□ 1.79
SGO1Q5FBB7 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC26.25■■□□□ 1.79
SGO1Q5FBB7 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.24■■□□□ 1.79
SGO1Q5FBB7 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SGO1Q5FBB7 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SGO1Q5FBB7 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
SGO1Q5FBB7 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SGO1Q5FBB7 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC26.22■■□□□ 1.79
SGO1Q5FBB7 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SGO1Q5FBB7 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SGO1Q5FBB7 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SGO1Q5FBB7 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
SGO1Q5FBB7 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.19■■□□□ 1.78
SGO1Q5FBB7 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SGO1Q5FBB7 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
SGO1Q5FBB7 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SGO1Q5FBB7 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SGO1Q5FBB7 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC26.16■■□□□ 1.78
SGO1Q5FBB7 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.14■■□□□ 1.78
SGO1Q5FBB7 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
SGO1Q5FBB7 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.12■■□□□ 1.77
SGO1Q5FBB7 ABCB10P1-201ENST00000614297 2181 ntBASIC26.11■■□□□ 1.77
SGO1Q5FBB7 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SGO1Q5FBB7 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.11■■□□□ 1.77
SGO1Q5FBB7 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SGO1Q5FBB7 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SGO1Q5FBB7 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SGO1Q5FBB7 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
SGO1Q5FBB7 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SGO1Q5FBB7 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SGO1Q5FBB7 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC26.04■■□□□ 1.76
SGO1Q5FBB7 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
SGO1Q5FBB7 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
SGO1Q5FBB7 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC26.03■■□□□ 1.76
SGO1Q5FBB7 AL161658.1-201ENST00000623641 1967 ntBASIC26.03■■□□□ 1.76
SGO1Q5FBB7 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
SGO1Q5FBB7 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.03■■□□□ 1.76
SGO1Q5FBB7 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC26.03■■□□□ 1.76
SGO1Q5FBB7 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26.02■■□□□ 1.76
SGO1Q5FBB7 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
SGO1Q5FBB7 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
SGO1Q5FBB7 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26■■□□□ 1.75
SGO1Q5FBB7 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
SGO1Q5FBB7 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC25.98■■□□□ 1.75
SGO1Q5FBB7 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
SGO1Q5FBB7 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SGO1Q5FBB7 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SGO1Q5FBB7 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC25.97■■□□□ 1.75
SGO1Q5FBB7 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
SGO1Q5FBB7 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
SGO1Q5FBB7 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.74
SGO1Q5FBB7 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC25.95■■□□□ 1.74
SGO1Q5FBB7 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
SGO1Q5FBB7 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC25.95■■□□□ 1.74
SGO1Q5FBB7 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.74
SGO1Q5FBB7 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SGO1Q5FBB7 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
SGO1Q5FBB7 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SGO1Q5FBB7 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SGO1Q5FBB7 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC25.93■■□□□ 1.74
SGO1Q5FBB7 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC25.93■■□□□ 1.74
SGO1Q5FBB7 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
SGO1Q5FBB7 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
SGO1Q5FBB7 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
SGO1Q5FBB7 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SGO1Q5FBB7 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SGO1Q5FBB7 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC25.9■■□□□ 1.74
SGO1Q5FBB7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SGO1Q5FBB7 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SGO1Q5FBB7 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC25.89■■□□□ 1.74
SGO1Q5FBB7 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
SGO1Q5FBB7 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
SGO1Q5FBB7 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SGO1Q5FBB7 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SGO1Q5FBB7 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
SGO1Q5FBB7 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SGO1Q5FBB7 AL133380.1-201ENST00000506013 324 ntBASIC25.86■■□□□ 1.73
SGO1Q5FBB7 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC25.86■■□□□ 1.73
SGO1Q5FBB7 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SGO1Q5FBB7 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
SGO1Q5FBB7 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
SGO1Q5FBB7 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SGO1Q5FBB7 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SGO1Q5FBB7 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SGO1Q5FBB7 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SGO1Q5FBB7 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC25.82■■□□□ 1.72
SGO1Q5FBB7 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SGO1Q5FBB7 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SGO1Q5FBB7 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SGO1Q5FBB7 WASH5P-204ENST00000632292 975 ntBASIC25.81■■□□□ 1.72
SGO1Q5FBB7 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SGO1Q5FBB7 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC25.81■■□□□ 1.72
SGO1Q5FBB7 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
SGO1Q5FBB7 RARRES2P7-201ENST00000567349 469 ntBASIC25.8■■□□□ 1.72
SGO1Q5FBB7 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
SGO1Q5FBB7 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC25.8■■□□□ 1.72
SGO1Q5FBB7 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SGO1Q5FBB7 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
SGO1Q5FBB7 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
SGO1Q5FBB7 ABCB10P3-201ENST00000561950 2166 ntBASIC25.76■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms