Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC21.31■■□□□ 1
CFHR3Q02985 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC21.3■■□□□ 1
CFHR3Q02985 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CFHR3Q02985 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CFHR3Q02985 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.28■■□□□ 1
CFHR3Q02985 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.28■■□□□ 1
CFHR3Q02985 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CFHR3Q02985 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CFHR3Q02985 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.27■■□□□ 1
CFHR3Q02985 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.27■■□□□ 1
CFHR3Q02985 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CFHR3Q02985 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CFHR3Q02985 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CFHR3Q02985 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
CFHR3Q02985 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.22■□□□□ 0.99
CFHR3Q02985 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CFHR3Q02985 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CFHR3Q02985 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CFHR3Q02985 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CFHR3Q02985 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CFHR3Q02985 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CFHR3Q02985 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.19■□□□□ 0.98
CFHR3Q02985 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CFHR3Q02985 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CFHR3Q02985 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CFHR3Q02985 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CFHR3Q02985 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CFHR3Q02985 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.15■□□□□ 0.98
CFHR3Q02985 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CFHR3Q02985 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CFHR3Q02985 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CFHR3Q02985 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CFHR3Q02985 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CFHR3Q02985 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CFHR3Q02985 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CFHR3Q02985 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC21.11■□□□□ 0.97
CFHR3Q02985 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CFHR3Q02985 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CFHR3Q02985 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.1■□□□□ 0.97
CFHR3Q02985 MIR762-201ENST00000390236 83 ntBASIC21.09■□□□□ 0.97
CFHR3Q02985 AP006261.1-201ENST00000584783 668 ntBASIC21.09■□□□□ 0.97
CFHR3Q02985 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CFHR3Q02985 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC21.08■□□□□ 0.97
CFHR3Q02985 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.08■□□□□ 0.97
CFHR3Q02985 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CFHR3Q02985 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CFHR3Q02985 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CFHR3Q02985 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CFHR3Q02985 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.06■□□□□ 0.96
CFHR3Q02985 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CFHR3Q02985 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CFHR3Q02985 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
CFHR3Q02985 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CFHR3Q02985 AL162393.1-201ENST00000437852 946 ntBASIC21.04■□□□□ 0.96
CFHR3Q02985 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.04■□□□□ 0.96
CFHR3Q02985 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.04■□□□□ 0.96
CFHR3Q02985 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CFHR3Q02985 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CFHR3Q02985 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.03■□□□□ 0.96
CFHR3Q02985 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CFHR3Q02985 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CFHR3Q02985 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CFHR3Q02985 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CFHR3Q02985 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CFHR3Q02985 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CFHR3Q02985 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.01■□□□□ 0.95
CFHR3Q02985 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.01■□□□□ 0.95
CFHR3Q02985 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CFHR3Q02985 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CFHR3Q02985 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
CFHR3Q02985 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
CFHR3Q02985 MIR3665-201ENST00000578708 105 ntBASIC21■□□□□ 0.95
CFHR3Q02985 DUX4L28-201ENST00000623687 678 ntBASIC21■□□□□ 0.95
CFHR3Q02985 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21■□□□□ 0.95
CFHR3Q02985 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CFHR3Q02985 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CFHR3Q02985 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CFHR3Q02985 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CFHR3Q02985 AC005559.1-201ENST00000589661 871 ntBASIC20.99■□□□□ 0.95
CFHR3Q02985 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CFHR3Q02985 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CFHR3Q02985 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CFHR3Q02985 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.97■□□□□ 0.95
CFHR3Q02985 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CFHR3Q02985 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CFHR3Q02985 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
CFHR3Q02985 RPS2P35-201ENST00000443417 897 ntBASIC20.96■□□□□ 0.95
CFHR3Q02985 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CFHR3Q02985 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CFHR3Q02985 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CFHR3Q02985 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CFHR3Q02985 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CFHR3Q02985 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.93■□□□□ 0.94
CFHR3Q02985 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CFHR3Q02985 AL161658.1-201ENST00000623641 1967 ntBASIC20.93■□□□□ 0.94
CFHR3Q02985 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CFHR3Q02985 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CFHR3Q02985 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CFHR3Q02985 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CFHR3Q02985 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms