Protein–RNA interactions for Protein: Q01844

EWSR1, RNA-binding protein EWS, humanhuman

Known RBP eCLIP

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1Q01844 GAK-223ENST00000628912 497 ntTSL 5 BASIC17.6■□□□□ 0.411e-6■■■■■ 35.7
EWSR1Q01844 GAK-220ENST00000513935 573 ntTSL 29.95□□□□□ -0.821e-6■■■■■ 35.7
EWSR1Q01844 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.471e-9■■■■■ 35.7
EWSR1Q01844 PPP2R3B-203ENST00000445792 1998 ntTSL 221.85■■□□□ 1.093e-9■■■■■ 35.7
EWSR1Q01844 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.911e-9■■■■■ 35.7
EWSR1Q01844 PLPPR3-203ENST00000519502 782 ntTSL 218.12■□□□□ 0.491e-9■■■■■ 35.7
EWSR1Q01844 DHRSX-207ENST00000478825 679 ntTSL 216.62■□□□□ 0.251e-9■■■■■ 35.7
EWSR1Q01844 PTP4A1-203ENST00000473334 638 ntTSL 316.51■□□□□ 0.231e-9■■■■■ 35.7
EWSR1Q01844 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.181e-9■■■■■ 35.7
EWSR1Q01844 DHRSX-203ENST00000430536 490 ntTSL 215.75■□□□□ 0.111e-9■■■■■ 35.7
EWSR1Q01844 PPP2R3B-201ENST00000381625 782 ntTSL 515.24■□□□□ 0.033e-9■■■■■ 35.7
EWSR1Q01844 DHRSX-202ENST00000412516 744 ntTSL 215.17■□□□□ 0.021e-9■■■■■ 35.7
EWSR1Q01844 PNCK-226ENST00000473831 738 ntTSL 513.62□□□□□ -0.231e-9■■■■■ 35.7
EWSR1Q01844 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.311e-9■■■■■ 35.7
EWSR1Q01844 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.351e-9■■■■■ 35.7
EWSR1Q01844 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.381e-9■■■■■ 35.7
EWSR1Q01844 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.391e-9■■■■■ 35.7
EWSR1Q01844 DHRSX-205ENST00000444280 797 ntTSL 212.58□□□□□ -0.41e-9■■■■■ 35.7
EWSR1Q01844 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.41e-9■■■■■ 35.7
EWSR1Q01844 CLTCL1-207ENST00000611723 838 ntTSL 212.47□□□□□ -0.411e-9■■■■■ 35.7
EWSR1Q01844 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC11.35□□□□□ -0.591e-9■■■■■ 35.7
EWSR1Q01844 AKNA-201ENST00000223791 4414 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.611e-9■■■■■ 35.7
EWSR1Q01844 CLTCL1-210ENST00000617926 1695 ntTSL 2 BASIC11.15□□□□□ -0.621e-9■■■■■ 35.7
EWSR1Q01844 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.681e-9■■■■■ 35.7
EWSR1Q01844 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC10.58□□□□□ -0.721e-9■■■■■ 35.7
EWSR1Q01844 ZBED1-204ENST00000461691 947 ntTSL 210.32□□□□□ -0.761e-9■■■■■ 35.7
EWSR1Q01844 CLTCL1-209ENST00000617103 4859 ntTSL 1 (best)9.45□□□□□ -0.91e-9■■■■■ 35.7
EWSR1Q01844 CLTCL1-202ENST00000427926 5513 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.051e-9■■■■■ 35.7
EWSR1Q01844 CLTCL1-211ENST00000621271 5313 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.071e-9■■■■■ 35.7
EWSR1Q01844 CLTCL1-208ENST00000615606 4994 ntTSL 1 (best)8.01□□□□□ -1.131e-9■■■■■ 35.7
EWSR1Q01844 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.445e-7■■■■■ 35.6
EWSR1Q01844 ARID3A-204ENST00000585895 377 ntTSL 219.84■□□□□ 0.779e-7■■■■■ 35.4
EWSR1Q01844 PNCK-216ENST00000458354 498 ntTSL 321.17■□□□□ 0.984e-7■■■■■ 35.3
EWSR1Q01844 PNCK-231ENST00000488994 1437 ntTSL 214.73□□□□□ -0.054e-7■■■■■ 35.3
EWSR1Q01844 PNCK-209ENST00000423545 448 ntTSL 413.88□□□□□ -0.194e-7■■■■■ 35.3
EWSR1Q01844 PNCK-207ENST00000419804 561 ntTSL 413.42□□□□□ -0.264e-7■■■■■ 35.3
EWSR1Q01844 PNCK-210ENST00000425526 725 ntTSL 511.82□□□□□ -0.524e-7■■■■■ 35.3
EWSR1Q01844 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.597e-7■■■■■ 35.3
EWSR1Q01844 MED16-209ENST00000592943 1628 ntTSL 1 (best)14.37□□□□□ -0.112e-7■■■■■ 35.2
EWSR1Q01844 MED16-212ENST00000607471 2004 ntTSL 1 (best)13.69□□□□□ -0.222e-7■■■■■ 35.2
EWSR1Q01844 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.262e-7■■■■■ 35.2
EWSR1Q01844 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC13.05□□□□□ -0.322e-7■■■■■ 35.2
EWSR1Q01844 MED16-214ENST00000617672 554 ntTSL 5 BASIC12.37□□□□□ -0.432e-7■■■■■ 35.2
EWSR1Q01844 MED16-205ENST00000586017 1403 ntTSL 1 (best)10.97□□□□□ -0.652e-7■■■■■ 35.2
EWSR1Q01844 MED16-211ENST00000606828 599 ntTSL 1 (best)9.98□□□□□ -0.812e-7■■■■■ 35.2
EWSR1Q01844 SEMA4C-203ENST00000449330 839 ntTSL 310.67□□□□□ -0.71e-8■■■■■ 35.1
EWSR1Q01844 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.342e-10■■■■■ 35
EWSR1Q01844 DAZAP1-204ENST00000586579 619 ntTSL 316.61■□□□□ 0.253e-8■■■■■ 34.8
EWSR1Q01844 ARID3A-202ENST00000457152 549 ntTSL 59.85□□□□□ -0.832e-7■■■■■ 34.7
EWSR1Q01844 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.271e-8■■■■■ 34.6
EWSR1Q01844 PPP2R5C-218ENST00000556260 2013 ntTSL 3 BASIC6.93□□□□□ -1.35e-8■■■■■ 34.6
EWSR1Q01844 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.514e-7■■■■■ 34.5
EWSR1Q01844 RNASET2-204ENST00000421787 1924 ntTSL 217.04■□□□□ 0.324e-7■■■■■ 34.5
EWSR1Q01844 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC15.24■□□□□ 0.034e-7■■■■■ 34.5
EWSR1Q01844 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC14.7□□□□□ -0.064e-7■■■■■ 34.5
EWSR1Q01844 RNASET2-201ENST00000028008 1220 ntTSL 513.92□□□□□ -0.184e-7■■■■■ 34.5
EWSR1Q01844 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC13.85□□□□□ -0.194e-7■■■■■ 34.5
EWSR1Q01844 RNASET2-202ENST00000358165 2445 ntTSL 213.65□□□□□ -0.224e-7■■■■■ 34.5
EWSR1Q01844 RNASET2-207ENST00000478180 963 ntTSL 513.28□□□□□ -0.284e-7■■■■■ 34.5
EWSR1Q01844 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.364e-7■■■■■ 34.5
EWSR1Q01844 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.94e-7■■■■■ 34.5
EWSR1Q01844 PLEC-201ENST00000322810 15249 ntAPPRIS P4 TSL 1 (best) BASIC10.12□□□□□ -0.795e-7■■■■■ 34.5
EWSR1Q01844 ARID3A-205ENST00000587532 1016 ntTSL 513.68□□□□□ -0.222e-7■■■■■ 34.5
EWSR1Q01844 MGAT5-203ENST00000468758 816 ntTSL 518.26■□□□□ 0.513e-9■■■■■ 34.5
EWSR1Q01844 MGAT5-204ENST00000481801 651 ntTSL 318.26■□□□□ 0.513e-9■■■■■ 34.5
EWSR1Q01844 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC14.73□□□□□ -0.053e-9■■■■■ 34.5
EWSR1Q01844 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.5□□□□□ -0.253e-9■■■■■ 34.5
EWSR1Q01844 POFUT2-205ENST00000460932 616 ntTSL 212.06□□□□□ -0.483e-9■■■■■ 34.5
EWSR1Q01844 POFUT2-208ENST00000471540 3176 ntTSL 510.72□□□□□ -0.693e-9■■■■■ 34.5
EWSR1Q01844 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.223e-9■■■■■ 34.5
EWSR1Q01844 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.28■□□□□ 0.361e-6■■■■■ 34.3
EWSR1Q01844 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC11.53□□□□□ -0.561e-6■■■■■ 34.3
EWSR1Q01844 AGAP1-212ENST00000614409 9932 ntTSL 5 BASIC9.74□□□□□ -0.851e-6■■■■■ 34.3
EWSR1Q01844 AGAP1-207ENST00000428334 10090 ntTSL 5 BASIC8.85□□□□□ -0.991e-6■■■■■ 34.3
EWSR1Q01844 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.538e-9■■■■■ 34.3
EWSR1Q01844 GSE1-204ENST00000411612 872 ntTSL 515.88■□□□□ 0.137e-9■■■■■ 34.3
EWSR1Q01844 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.637e-9■■■■■ 34.3
EWSR1Q01844 PLEC-209ENST00000526416 583 ntTSL 312.34□□□□□ -0.434e-7■■■■■ 34.3
EWSR1Q01844 PLEC-212ENST00000527816 583 ntTSL 310.05□□□□□ -0.84e-7■■■■■ 34.3
EWSR1Q01844 UBE2D3-216ENST00000503742 1977 ntTSL 1 (best)17.71■□□□□ 0.435e-7■■■■■ 34.3
EWSR1Q01844 UBE2D3-214ENST00000503282 584 ntTSL 216.21■□□□□ 0.195e-7■■■■■ 34.3
EWSR1Q01844 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.085e-7■■■■■ 34.3
EWSR1Q01844 UBE2D3-229ENST00000510129 582 ntTSL 315.49■□□□□ 0.075e-7■■■■■ 34.3
EWSR1Q01844 UBE2D3-220ENST00000505307 743 ntTSL 514.7□□□□□ -0.065e-7■■■■■ 34.3
EWSR1Q01844 UBE2D3-215ENST00000503418 662 ntTSL 414.34□□□□□ -0.115e-7■■■■■ 34.3
EWSR1Q01844 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.335e-7■■■■■ 34.3
EWSR1Q01844 UBE2D3-213ENST00000502690 599 ntTSL 412.7□□□□□ -0.385e-7■■■■■ 34.3
EWSR1Q01844 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.465e-7■■■■■ 34.3
EWSR1Q01844 UBE2D3-228ENST00000508974 568 ntTSL 410.92□□□□□ -0.665e-7■■■■■ 34.3
EWSR1Q01844 UBE2D3-209ENST00000394804 4166 ntAPPRIS ALT1 TSL 5 BASIC10.18□□□□□ -0.785e-7■■■■■ 34.3
EWSR1Q01844 UBE2D3-208ENST00000394803 2227 ntAPPRIS ALT1 TSL 1 (best) BASIC8.73□□□□□ -1.015e-7■■■■■ 34.3
EWSR1Q01844 UBE2D3-232ENST00000514755 593 ntTSL 48.06□□□□□ -1.125e-7■■■■■ 34.3
EWSR1Q01844 UBE2D3-206ENST00000357194 660 ntTSL 2 BASIC7.64□□□□□ -1.195e-7■■■■■ 34.3
EWSR1Q01844 UBE2D3-227ENST00000508818 584 ntTSL 27.42□□□□□ -1.225e-7■■■■■ 34.3
EWSR1Q01844 UBE2D3-202ENST00000338145 896 ntAPPRIS ALT1 TSL 5 BASIC6.89□□□□□ -1.315e-7■■■■■ 34.3
EWSR1Q01844 UBE2D3-223ENST00000508249 604 ntTSL 46.89□□□□□ -1.315e-7■■■■■ 34.3
EWSR1Q01844 UBE2D3-204ENST00000349311 838 ntAPPRIS ALT1 TSL 2 BASIC6.59□□□□□ -1.355e-7■■■■■ 34.3
EWSR1Q01844 UBE2D3-222ENST00000508238 547 ntTSL 45.82□□□□□ -1.485e-7■■■■■ 34.3
EWSR1Q01844 CORO1C-205ENST00000546571 899 ntTSL 410.84□□□□□ -0.672e-11■■■■■ 34.3
EWSR1Q01844 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.57e-9■■■■■ 34.2
Retrieved 100 of 7,101 protein–RNA pairs in 48.8 ms