RNA–Protein interactions for RNA: ENST00000526416.5

PLEC-209, Transcript of plectin, humanhuman

TSL 3

Gene PLEC, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLEC-209ENST00000526416 NISCHQ9Y2I1 1504 aa41.18■■■■■ 4.18
PLEC-209ENST00000526416 CCDC180Q9P1Z9 1646 aa36.71■■■■□ 3.47
PLEC-209ENST00000526416 ABCC9O60706 1549 aa35.88■■■■□ 3.33
PLEC-209ENST00000526416 RB1CC1Q8TDY2 1594 aa34.55■■■■□ 3.12
PLEC-209ENST00000526416 NACADO15069 1562 aa34.49■■■■□ 3.11
PLEC-209ENST00000526416 ZCCHC6Q5VYS8 1495 aaKnown RBP34.33■■■■□ 3.09
PLEC-209ENST00000526416 DCAF8L2P0C7V8 631 aa34.29■■■■□ 3.08
PLEC-209ENST00000526416 MYO15BQ96JP2 1530 aa34.29■■■■□ 3.08
PLEC-209ENST00000526416 DCAF1Q9Y4B6 1507 aa34.11■■■■□ 3.05
PLEC-209ENST00000526416 UNC13AQ9UPW8 1703 aa33.78■■■■□ 3
PLEC-209ENST00000526416 BICRAQ9NZM4 1560 aa33.5■■■□□ 2.95
PLEC-209ENST00000526416 PABPN1Q86U42 306 aaKnown RBP eCLIP33.46■■■□□ 2.95
PLEC-209ENST00000526416 SCRIBQ14160 1630 aa33.45■■■□□ 2.95
PLEC-209ENST00000526416 SHROOM4Q9ULL8 1493 aa33.2■■■□□ 2.91
PLEC-209ENST00000526416 DNAJC5BQ9UF47 199 aa32.92■■■□□ 2.86
PLEC-209ENST00000526416 EIF4G1Q04637 1599 aaKnown RBP32.62■■■□□ 2.81
PLEC-209ENST00000526416 CC2D2AQ9P2K1 1620 aa32.49■■■□□ 2.79
PLEC-209ENST00000526416 CECR2Q9BXF3 1484 aa32.27■■■□□ 2.76
PLEC-209ENST00000526416 SMARCA4P51532 1647 aa32■■■□□ 2.71
PLEC-209ENST00000526416 BAZ1AQ9NRL2 1556 aaPredicted RBP31.94■■■□□ 2.7
PLEC-209ENST00000526416 ATAD2BQ9ULI0 1458 aa31.8■■■□□ 2.68
PLEC-209ENST00000526416 SMARCA2P51531 1590 aa31.8■■■□□ 2.68
PLEC-209ENST00000526416 NCAPD3P42695 1498 aa31.79■■■□□ 2.68
PLEC-209ENST00000526416 MROH2BQ7Z745 1585 aa31.73■■■□□ 2.67
PLEC-209ENST00000526416 PEG3Q9GZU2 1588 aa31.69■■■□□ 2.66
PLEC-209ENST00000526416 HMGXB3Q12766 1538 aa31.69■■■□□ 2.66
PLEC-209ENST00000526416 BAZ1BQ9UIG0 1483 aaKnown RBP31.55■■■□□ 2.64
PLEC-209ENST00000526416 WIZO95785 1651 aa31.38■■■□□ 2.61
PLEC-209ENST00000526416 RSF1Q96T23 1441 aaPredicted RBP31.32■■■□□ 2.61
PLEC-209ENST00000526416 TOP2AP11388 1531 aaKnown RBP31.08■■■□□ 2.57
PLEC-209ENST00000526416 NESP48681 1621 aa31.04■■■□□ 2.56
PLEC-209ENST00000526416 LAMC3Q9Y6N6 1575 aa31■■■□□ 2.55
PLEC-209ENST00000526416 ERCC6Q03468 1493 aa30.96■■■□□ 2.55
PLEC-209ENST00000526416 CADPSQ9ULU8 1353 aa30.84■■■□□ 2.53
PLEC-209ENST00000526416 PDS5BQ9NTI5 1447 aa30.76■■■□□ 2.51
PLEC-209ENST00000526416 KIF21AQ7Z4S6 1674 aa30.71■■■□□ 2.51
PLEC-209ENST00000526416 CUX2O14529 1486 aa30.69■■■□□ 2.5
PLEC-209ENST00000526416 CFTRP13569 1480 aa30.68■■■□□ 2.5
PLEC-209ENST00000526416 CCDC88BA6NC98 1476 aa30.66■■■□□ 2.5
PLEC-209ENST00000526416 THOC2Q8NI27 1593 aaKnown RBP30.65■■■□□ 2.5
PLEC-209ENST00000526416 FANCD2Q9BXW9 1451 aa30.52■■■□□ 2.48
PLEC-209ENST00000526416 PRDM2Q13029 1718 aa30.51■■■□□ 2.47
PLEC-209ENST00000526416 CEP164Q9UPV0 1460 aa30.5■■■□□ 2.47
PLEC-209ENST00000526416 MRC2Q9UBG0 1479 aa30.47■■■□□ 2.47
PLEC-209ENST00000526416 SUPT5HO00267 1087 aaKnown RBP30.4■■■□□ 2.46
PLEC-209ENST00000526416 WDR62O43379 1518 aa30.39■■■□□ 2.46
PLEC-209ENST00000526416 URB2Q14146 1524 aaKnown RBP30.22■■■□□ 2.43
PLEC-209ENST00000526416 TOPBP1Q92547 1522 aa30.03■■■□□ 2.4
PLEC-209ENST00000526416 ABCC8Q09428 1581 aa30.03■■■□□ 2.4
PLEC-209ENST00000526416 DNMBPQ6XZF7 1577 aa30.01■■■□□ 2.39
PLEC-209ENST00000526416 IFT140Q96RY7 1462 aa29.87■■■□□ 2.37
PLEC-209ENST00000526416 CUX1P39880 1505 aa29.78■■■□□ 2.36
PLEC-209ENST00000526416 POLA1P09884 1462 aaPredicted RBP29.77■■■□□ 2.36
PLEC-209ENST00000526416 TARBP1Q13395 1621 aaKnown RBP29.72■■■□□ 2.35
PLEC-209ENST00000526416 DNAJC5Q9H3Z4 198 aa29.72■■■□□ 2.35
PLEC-209ENST00000526416 ZNF608Q9ULD9 1512 aaPredicted RBP29.71■■■□□ 2.35
PLEC-209ENST00000526416 FGD5Q6ZNL6 1462 aa29.69■■■□□ 2.34
PLEC-209ENST00000526416 EIF4G3O43432 1585 aaKnown RBP29.64■■■□□ 2.34
PLEC-209ENST00000526416 RAD54L2Q9Y4B4 1467 aa29.61■■■□□ 2.33
PLEC-209ENST00000526416 SOGA1O94964 1423 aa29.6■■■□□ 2.33
PLEC-209ENST00000526416 WRNQ14191 1432 aaPredicted RBP eCLIP29.55■■■□□ 2.321e-6■■■■■ 58.5
PLEC-209ENST00000526416 BIVM-ERCC5R4GMW8 1640 aa29.54■■■□□ 2.32
PLEC-209ENST00000526416 WDR97A6NE52 1622 aa29.53■■■□□ 2.32
PLEC-209ENST00000526416 TOP2BQ02880 1626 aa29.53■■■□□ 2.32
PLEC-209ENST00000526416 SYNJ1O43426 1573 aa29.51■■■□□ 2.31
PLEC-209ENST00000526416 AQRO60306 1485 aaKnown RBP eCLIP29.5■■■□□ 2.313e-7■■■■□ 22.8
PLEC-209ENST00000526416 TDRD9Q8NDG6 1382 aaKnown RBP29.43■■■□□ 2.3
PLEC-209ENST00000526416 ABCA10Q8WWZ4 1543 aa29.41■■■□□ 2.3
PLEC-209ENST00000526416 ABCA5Q8WWZ7 1642 aa29.33■■■□□ 2.29
PLEC-209ENST00000526416 GRIN2BQ13224 1484 aa29.3■■■□□ 2.28
PLEC-209ENST00000526416 OSCARQ8IYS5 282 aa29.3■■■□□ 2.28
PLEC-209ENST00000526416 GAPVD1Q14C86 1478 aa29.29■■■□□ 2.28
PLEC-209ENST00000526416 SNAPC4Q5SXM2 1469 aa29.29■■■□□ 2.28
PLEC-209ENST00000526416 PBRM1Q86U86 1689 aa29.28■■■□□ 2.28
PLEC-209ENST00000526416 CHD1O14646 1710 aa29.28■■■□□ 2.28
PLEC-209ENST00000526416 MAGI1Q96QZ7 1491 aaPredicted RBP29.26■■■□□ 2.27
PLEC-209ENST00000526416 SYNJ2O15056 1496 aa29.13■■■□□ 2.25
PLEC-209ENST00000526416 FBLN2P98095 1184 aa29.12■■■□□ 2.25
PLEC-209ENST00000526416 ADAMTS12P58397 1594 aa29.06■■■□□ 2.24
PLEC-209ENST00000526416 ERICH3Q5RHP9 1530 aa29.06■■■□□ 2.24
PLEC-209ENST00000526416 CHMP7Q8WUX9 453 aaPredicted RBP29.04■■■□□ 2.24
PLEC-209ENST00000526416 CLASP1Q7Z460 1538 aa28.96■■■□□ 2.23
PLEC-209ENST00000526416 FHAD1B1AJZ9 1412 aa28.95■■■□□ 2.23
PLEC-209ENST00000526416 GRIN2AQ12879 1464 aa28.94■■■□□ 2.22
PLEC-209ENST00000526416 KIF27Q86VH2 1401 aa28.94■■■□□ 2.22
PLEC-209ENST00000526416 RIMBP3CA6NJZ7 1639 aa28.93■■■□□ 2.22
PLEC-209ENST00000526416 RIMBP3BA6NNM3 1639 aa28.93■■■□□ 2.22
PLEC-209ENST00000526416 RIMBP3Q9UFD9 1639 aa28.93■■■□□ 2.22
PLEC-209ENST00000526416 ARHGEF11O15085 1522 aa28.92■■■□□ 2.22
PLEC-209ENST00000526416 NUP160Q12769 1436 aa28.82■■■□□ 2.2
PLEC-209ENST00000526416 CUL7Q14999 1698 aa28.81■■■□□ 2.2
PLEC-209ENST00000526416 CEP170Q5SW79 1584 aa28.81■■■□□ 2.2
PLEC-209ENST00000526416 IGF1RP08069 1367 aa28.78■■■□□ 2.2
PLEC-209ENST00000526416 TRIM41Q8WV44 630 aa28.72■■■□□ 2.19
PLEC-209ENST00000526416 ARAP1Q96P48 1450 aa28.68■■■□□ 2.18
PLEC-209ENST00000526416 RUSC2Q8N2Y8 1516 aa28.64■■■□□ 2.17
PLEC-209ENST00000526416 SHROOM2Q13796 1616 aa28.63■■■□□ 2.17
PLEC-209ENST00000526416 CARMIL1Q5VZK9 1371 aa28.62■■■□□ 2.17
PLEC-209ENST00000526416 CYB5RLQ6IPT4 315 aa28.54■■■□□ 2.16
PLEC-209ENST00000526416 ERCC6L2Q5T890 1561 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms