RNA–Protein interactions for RNA: ENST00000617926.4

CLTCL1-210, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-210ENST00000617926 NISCHQ9Y2I1 1504 aa27.8■■■□□ 2.04
CLTCL1-210ENST00000617926 CCDC180Q9P1Z9 1646 aa24.72■■□□□ 1.55
CLTCL1-210ENST00000617926 ABCC9O60706 1549 aa24.13■■□□□ 1.45
CLTCL1-210ENST00000617926 RB1CC1Q8TDY2 1594 aa23.2■■□□□ 1.3
CLTCL1-210ENST00000617926 ZCCHC6Q5VYS8 1495 aaKnown RBP23.19■■□□□ 1.3
CLTCL1-210ENST00000617926 NACADO15069 1562 aa23.18■■□□□ 1.3
CLTCL1-210ENST00000617926 DCAF8L2P0C7V8 631 aa23.13■■□□□ 1.29
CLTCL1-210ENST00000617926 MYO15BQ96JP2 1530 aa23.04■■□□□ 1.28
CLTCL1-210ENST00000617926 DCAF1Q9Y4B6 1507 aa22.98■■□□□ 1.27
CLTCL1-210ENST00000617926 UNC13AQ9UPW8 1703 aa22.83■■□□□ 1.24
CLTCL1-210ENST00000617926 SCRIBQ14160 1630 aa22.59■■□□□ 1.21
CLTCL1-210ENST00000617926 BICRAQ9NZM4 1560 aa22.58■■□□□ 1.2
CLTCL1-210ENST00000617926 PABPN1Q86U42 306 aaKnown RBP eCLIP22.52■■□□□ 1.2
CLTCL1-210ENST00000617926 SHROOM4Q9ULL8 1493 aa22.5■■□□□ 1.19
CLTCL1-210ENST00000617926 DNAJC5BQ9UF47 199 aa22.11■■□□□ 1.13
CLTCL1-210ENST00000617926 SUPT5HO00267 1087 aaKnown RBP22.09■■□□□ 1.13
CLTCL1-210ENST00000617926 EIF4G1Q04637 1599 aaKnown RBP21.94■■□□□ 1.1
CLTCL1-210ENST00000617926 CC2D2AQ9P2K1 1620 aa21.85■■□□□ 1.09
CLTCL1-210ENST00000617926 CHIC1Q5VXU3 224 aa21.73■■□□□ 1.07
CLTCL1-210ENST00000617926 CECR2Q9BXF3 1484 aa21.69■■□□□ 1.06
CLTCL1-210ENST00000617926 SMARCA4P51532 1647 aa21.6■■□□□ 1.05
CLTCL1-210ENST00000617926 BAZ1AQ9NRL2 1556 aaPredicted RBP21.53■■□□□ 1.04
CLTCL1-210ENST00000617926 MROH2BQ7Z745 1585 aa21.46■■□□□ 1.03
CLTCL1-210ENST00000617926 ATAD2BQ9ULI0 1458 aa21.43■■□□□ 1.02
CLTCL1-210ENST00000617926 SMARCA2P51531 1590 aa21.38■■□□□ 1.01
CLTCL1-210ENST00000617926 NCAPD3P42695 1498 aa21.38■■□□□ 1.01
CLTCL1-210ENST00000617926 PEG3Q9GZU2 1588 aa21.36■■□□□ 1.01
CLTCL1-210ENST00000617926 HRCP23327 699 aa21.34■■□□□ 1.01
CLTCL1-210ENST00000617926 HMGXB3Q12766 1538 aa21.31■■□□□ 1
CLTCL1-210ENST00000617926 WIZO95785 1651 aa21.26■□□□□ 0.99
CLTCL1-210ENST00000617926 BAZ1BQ9UIG0 1483 aaKnown RBP21.24■□□□□ 0.99
CLTCL1-210ENST00000617926 RSF1Q96T23 1441 aaPredicted RBP21.19■□□□□ 0.98
CLTCL1-210ENST00000617926 PCGF6Q9BYE7 350 aa21.05■□□□□ 0.96
CLTCL1-210ENST00000617926 TOP2AP11388 1531 aaKnown RBP20.99■□□□□ 0.95
CLTCL1-210ENST00000617926 LOC105371045A0A1W2PR82 267 aa20.93■□□□□ 0.94
CLTCL1-210ENST00000617926 NESP48681 1621 aa20.93■□□□□ 0.94
CLTCL1-210ENST00000617926 LAMC3Q9Y6N6 1575 aa20.83■□□□□ 0.93
CLTCL1-210ENST00000617926 TRIM26Q12899 539 aaPredicted RBP20.78■□□□□ 0.92
CLTCL1-210ENST00000617926 ERCC6Q03468 1493 aa20.75■□□□□ 0.91
CLTCL1-210ENST00000617926 CADPSQ9ULU8 1353 aa20.74■□□□□ 0.91
CLTCL1-210ENST00000617926 CCDC88BA6NC98 1476 aa20.73■□□□□ 0.91
CLTCL1-210ENST00000617926 KIF21AQ7Z4S6 1674 aa20.72■□□□□ 0.91
CLTCL1-210ENST00000617926 PPARGC1BQ86YN6 1023 aaKnown RBP20.68■□□□□ 0.9
CLTCL1-210ENST00000617926 CFTRP13569 1480 aa20.67■□□□□ 0.9
CLTCL1-210ENST00000617926 TRIM41Q8WV44 630 aa20.66■□□□□ 0.9
CLTCL1-210ENST00000617926 PDS5BQ9NTI5 1447 aa20.63■□□□□ 0.89
CLTCL1-210ENST00000617926 THOC2Q8NI27 1593 aaKnown RBP20.62■□□□□ 0.89
CLTCL1-210ENST00000617926 PRDM2Q13029 1718 aa20.61■□□□□ 0.89
CLTCL1-210ENST00000617926 FANCD2Q9BXW9 1451 aa20.54■□□□□ 0.88
CLTCL1-210ENST00000617926 CUX2O14529 1486 aa20.51■□□□□ 0.87
CLTCL1-210ENST00000617926 CEP164Q9UPV0 1460 aa20.51■□□□□ 0.87
CLTCL1-210ENST00000617926 MRC2Q9UBG0 1479 aa20.46■□□□□ 0.87
CLTCL1-210ENST00000617926 ZEB1P37275 1124 aaPredicted RBP20.46■□□□□ 0.87
CLTCL1-210ENST00000617926 WDR62O43379 1518 aa20.43■□□□□ 0.86
CLTCL1-210ENST00000617926 URB2Q14146 1524 aaKnown RBP20.37■□□□□ 0.85
CLTCL1-210ENST00000617926 FAM9AQ8IZU1 332 aaPredicted RBP20.35■□□□□ 0.85
CLTCL1-210ENST00000617926 TOPBP1Q92547 1522 aa20.24■□□□□ 0.83
CLTCL1-210ENST00000617926 DNMBPQ6XZF7 1577 aa20.22■□□□□ 0.83
CLTCL1-210ENST00000617926 ABCC8Q09428 1581 aa20.16■□□□□ 0.82
CLTCL1-210ENST00000617926 CUX1P39880 1505 aa20.13■□□□□ 0.81
CLTCL1-210ENST00000617926 WRNQ14191 1432 aaPredicted RBP eCLIP20.12■□□□□ 0.81
CLTCL1-210ENST00000617926 POLA1P09884 1462 aaPredicted RBP20.08■□□□□ 0.8
CLTCL1-210ENST00000617926 EEA1Q15075 1411 aa20.06■□□□□ 0.8
CLTCL1-210ENST00000617926 IFT140Q96RY7 1462 aa20.06■□□□□ 0.8
CLTCL1-210ENST00000617926 TARBP1Q13395 1621 aaKnown RBP20.05■□□□□ 0.8
CLTCL1-210ENST00000617926 FGD5Q6ZNL6 1462 aa20.04■□□□□ 0.8
CLTCL1-210ENST00000617926 ZNF608Q9ULD9 1512 aaPredicted RBP20.03■□□□□ 0.8
CLTCL1-210ENST00000617926 EHMT2Q96KQ7 1210 aa20.03■□□□□ 0.8
CLTCL1-210ENST00000617926 RAD54L2Q9Y4B4 1467 aa20■□□□□ 0.79
CLTCL1-210ENST00000617926 SYNJ1O43426 1573 aa20■□□□□ 0.79
CLTCL1-210ENST00000617926 BIVM-ERCC5R4GMW8 1640 aa19.98■□□□□ 0.79
CLTCL1-210ENST00000617926 TNIKQ9UKE5 1360 aa19.98■□□□□ 0.79
CLTCL1-210ENST00000617926 EIF4G3O43432 1585 aaKnown RBP19.97■□□□□ 0.79
CLTCL1-210ENST00000617926 CEP162Q5TB80 1403 aa19.97■□□□□ 0.79
CLTCL1-210ENST00000617926 TOP2BQ02880 1626 aa19.96■□□□□ 0.79
CLTCL1-210ENST00000617926 SOGA1O94964 1423 aa19.94■□□□□ 0.78
CLTCL1-210ENST00000617926 WDR97A6NE52 1622 aa19.94■□□□□ 0.78
CLTCL1-210ENST00000617926 AQRO60306 1485 aaKnown RBP eCLIP19.88■□□□□ 0.77
CLTCL1-210ENST00000617926 GOLGA3Q08378 1498 aa19.85■□□□□ 0.77
CLTCL1-210ENST00000617926 TDRD9Q8NDG6 1382 aaKnown RBP19.84■□□□□ 0.77
CLTCL1-210ENST00000617926 ABCA10Q8WWZ4 1543 aa19.82■□□□□ 0.76
CLTCL1-210ENST00000617926 KIF21BO75037 1637 aa19.82■□□□□ 0.76
CLTCL1-210ENST00000617926 RUSC2Q8N2Y8 1516 aa19.82■□□□□ 0.76
CLTCL1-210ENST00000617926 ABCA5Q8WWZ7 1642 aa19.8■□□□□ 0.76
CLTCL1-210ENST00000617926 CSRNP3Q8WYN3 585 aa19.8■□□□□ 0.76
CLTCL1-210ENST00000617926 DNAJC5Q9H3Z4 198 aa19.78■□□□□ 0.76
CLTCL1-210ENST00000617926 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.78■□□□□ 0.76
CLTCL1-210ENST00000617926 PBRM1Q86U86 1689 aa19.78■□□□□ 0.76
CLTCL1-210ENST00000617926 CCER1Q8TC90 406 aaPredicted RBP19.77■□□□□ 0.76
CLTCL1-210ENST00000617926 CHD1O14646 1710 aa19.74■□□□□ 0.75
CLTCL1-210ENST00000617926 GAPVD1Q14C86 1478 aa19.73■□□□□ 0.75
CLTCL1-210ENST00000617926 SNAPC4Q5SXM2 1469 aa19.72■□□□□ 0.75
CLTCL1-210ENST00000617926 GRIN2BQ13224 1484 aa19.71■□□□□ 0.75
CLTCL1-210ENST00000617926 SCAF1Q9H7N4 1312 aaKnown RBP19.68■□□□□ 0.74
CLTCL1-210ENST00000617926 MAGI1Q96QZ7 1491 aaPredicted RBP19.66■□□□□ 0.74
CLTCL1-210ENST00000617926 UBTFP17480 764 aaKnown RBP19.61■□□□□ 0.73
CLTCL1-210ENST00000617926 OSCARQ8IYS5 282 aa19.61■□□□□ 0.73
CLTCL1-210ENST00000617926 PELP1Q8IZL8 1130 aaKnown RBP19.61■□□□□ 0.73
CLTCL1-210ENST00000617926 ADAMTS12P58397 1594 aa19.59■□□□□ 0.73
CLTCL1-210ENST00000617926 SYNJ2O15056 1496 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms