Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC19.2■□□□□ 0.66
UBE2D3P61077 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
UBE2D3P61077 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
UBE2D3P61077 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBE2D3P61077 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
UBE2D3P61077 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBE2D3P61077 AL031258.1-201ENST00000623562 325 ntBASIC19.17■□□□□ 0.66
UBE2D3P61077 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC19.16■□□□□ 0.66
UBE2D3P61077 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBE2D3P61077 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBE2D3P61077 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBE2D3P61077 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
UBE2D3P61077 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBE2D3P61077 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC19.14■□□□□ 0.65
UBE2D3P61077 AP002365.1-201ENST00000603448 772 ntBASIC19.14■□□□□ 0.65
UBE2D3P61077 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBE2D3P61077 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBE2D3P61077 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBE2D3P61077 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2D3P61077 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
UBE2D3P61077 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2D3P61077 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2D3P61077 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2D3P61077 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UBE2D3P61077 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UBE2D3P61077 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UBE2D3P61077 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UBE2D3P61077 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UBE2D3P61077 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UBE2D3P61077 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC19.08■□□□□ 0.65
UBE2D3P61077 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBE2D3P61077 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC19.07■□□□□ 0.64
UBE2D3P61077 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UBE2D3P61077 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
UBE2D3P61077 SHF-206ENST00000560471 2499 ntTSL 5 BASIC19.05■□□□□ 0.64
UBE2D3P61077 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
UBE2D3P61077 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBE2D3P61077 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBE2D3P61077 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UBE2D3P61077 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
UBE2D3P61077 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
UBE2D3P61077 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
UBE2D3P61077 ABCB10P3-201ENST00000561950 2166 ntBASIC19.02■□□□□ 0.63
UBE2D3P61077 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBE2D3P61077 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
UBE2D3P61077 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC19■□□□□ 0.63
UBE2D3P61077 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
UBE2D3P61077 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC18.99■□□□□ 0.63
UBE2D3P61077 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBE2D3P61077 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBE2D3P61077 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
UBE2D3P61077 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
UBE2D3P61077 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBE2D3P61077 ABCB10P1-201ENST00000614297 2181 ntBASIC18.98■□□□□ 0.63
UBE2D3P61077 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBE2D3P61077 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC18.98■□□□□ 0.63
UBE2D3P61077 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
UBE2D3P61077 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE2D3P61077 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE2D3P61077 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
UBE2D3P61077 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC18.95■□□□□ 0.62
UBE2D3P61077 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
UBE2D3P61077 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UBE2D3P61077 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC18.94■□□□□ 0.62
UBE2D3P61077 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBE2D3P61077 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBE2D3P61077 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBE2D3P61077 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
UBE2D3P61077 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
UBE2D3P61077 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBE2D3P61077 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
UBE2D3P61077 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBE2D3P61077 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBE2D3P61077 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UBE2D3P61077 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC18.91■□□□□ 0.62
UBE2D3P61077 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UBE2D3P61077 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC18.9■□□□□ 0.62
UBE2D3P61077 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBE2D3P61077 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
UBE2D3P61077 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
UBE2D3P61077 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC18.89■□□□□ 0.61
UBE2D3P61077 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC18.89■□□□□ 0.61
UBE2D3P61077 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBE2D3P61077 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
UBE2D3P61077 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBE2D3P61077 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
UBE2D3P61077 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
UBE2D3P61077 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC18.87■□□□□ 0.61
UBE2D3P61077 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBE2D3P61077 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
UBE2D3P61077 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBE2D3P61077 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBE2D3P61077 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UBE2D3P61077 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UBE2D3P61077 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
UBE2D3P61077 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBE2D3P61077 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBE2D3P61077 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBE2D3P61077 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
UBE2D3P61077 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms