Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CDKN1AP38936 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDKN1AP38936 DENR-202ENST00000455982 1052 ntTSL 5 BASIC23.25■■□□□ 1.31
CDKN1AP38936 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDKN1AP38936 MIR7108-201ENST00000614319 87 ntBASIC23.24■■□□□ 1.31
CDKN1AP38936 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDKN1AP38936 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDKN1AP38936 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC23.22■■□□□ 1.31
CDKN1AP38936 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
CDKN1AP38936 MLEC-202ENST00000412616 841 ntTSL 3 BASIC23.21■■□□□ 1.31
CDKN1AP38936 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CDKN1AP38936 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDKN1AP38936 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CDKN1AP38936 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDKN1AP38936 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC23.17■■□□□ 1.3
CDKN1AP38936 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.17■■□□□ 1.3
CDKN1AP38936 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDKN1AP38936 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CDKN1AP38936 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
CDKN1AP38936 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
CDKN1AP38936 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
CDKN1AP38936 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC23.13■■□□□ 1.29
CDKN1AP38936 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CDKN1AP38936 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDKN1AP38936 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC23.11■■□□□ 1.29
CDKN1AP38936 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC23.11■■□□□ 1.29
CDKN1AP38936 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
CDKN1AP38936 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CDKN1AP38936 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.11■■□□□ 1.29
CDKN1AP38936 RPS2-209ENST00000529806 993 ntTSL 3 BASIC23.11■■□□□ 1.29
CDKN1AP38936 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDKN1AP38936 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC23.11■■□□□ 1.29
CDKN1AP38936 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CDKN1AP38936 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CDKN1AP38936 BOD1-206ENST00000480951 814 ntTSL 2 BASIC23.1■■□□□ 1.29
CDKN1AP38936 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CDKN1AP38936 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC23.09■■□□□ 1.29
CDKN1AP38936 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CDKN1AP38936 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.08■■□□□ 1.29
CDKN1AP38936 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.08■■□□□ 1.29
CDKN1AP38936 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CDKN1AP38936 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CDKN1AP38936 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.07■■□□□ 1.28
CDKN1AP38936 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
CDKN1AP38936 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CDKN1AP38936 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.06■■□□□ 1.28
CDKN1AP38936 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDKN1AP38936 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDKN1AP38936 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CDKN1AP38936 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CDKN1AP38936 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CDKN1AP38936 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CDKN1AP38936 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
CDKN1AP38936 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC23.02■■□□□ 1.28
CDKN1AP38936 ZNRF2P2-203ENST00000454624 420 ntBASIC23.01■■□□□ 1.27
CDKN1AP38936 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC23.01■■□□□ 1.27
CDKN1AP38936 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CDKN1AP38936 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC23■■□□□ 1.27
CDKN1AP38936 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC23■■□□□ 1.27
CDKN1AP38936 HLA-V-202ENST00000446817 847 ntBASIC23■■□□□ 1.27
CDKN1AP38936 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CDKN1AP38936 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CDKN1AP38936 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CDKN1AP38936 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC22.99■■□□□ 1.27
CDKN1AP38936 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CDKN1AP38936 MBP-237ENST00000579129 1052 ntTSL 5 BASIC22.98■■□□□ 1.27
CDKN1AP38936 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CDKN1AP38936 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC22.97■■□□□ 1.27
CDKN1AP38936 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
CDKN1AP38936 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC22.96■■□□□ 1.27
CDKN1AP38936 HGH1-207ENST00000628266 258 ntTSL 5 BASIC22.96■■□□□ 1.27
CDKN1AP38936 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CDKN1AP38936 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
CDKN1AP38936 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CDKN1AP38936 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC22.95■■□□□ 1.26
CDKN1AP38936 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
CDKN1AP38936 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC22.94■■□□□ 1.26
CDKN1AP38936 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CDKN1AP38936 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CDKN1AP38936 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC22.93■■□□□ 1.26
CDKN1AP38936 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC22.92■■□□□ 1.26
CDKN1AP38936 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CDKN1AP38936 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC22.92■■□□□ 1.26
CDKN1AP38936 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CDKN1AP38936 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CDKN1AP38936 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CDKN1AP38936 DUX4L29-201ENST00000425409 679 ntBASIC22.9■■□□□ 1.26
CDKN1AP38936 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
CDKN1AP38936 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CDKN1AP38936 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
CDKN1AP38936 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC22.88■■□□□ 1.25
CDKN1AP38936 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC22.88■■□□□ 1.25
CDKN1AP38936 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CDKN1AP38936 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CDKN1AP38936 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CDKN1AP38936 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC22.86■■□□□ 1.25
CDKN1AP38936 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CDKN1AP38936 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
CDKN1AP38936 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC22.85■■□□□ 1.25
CDKN1AP38936 CIB2-204ENST00000557846 934 ntTSL 3 BASIC22.85■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms