Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 WASH5P-204ENST00000632292 975 ntBASIC32.56■■■□□ 2.8
APPP05067 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC32.55■■■□□ 2.8
APPP05067 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
APPP05067 EBPL-202ENST00000378268 680 ntTSL 3 BASIC32.53■■■□□ 2.8
APPP05067 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
APPP05067 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
APPP05067 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
APPP05067 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC32.5■■■□□ 2.79
APPP05067 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC32.5■■■□□ 2.79
APPP05067 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
APPP05067 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
APPP05067 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
APPP05067 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
APPP05067 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
APPP05067 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC32.45■■■□□ 2.78
APPP05067 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
APPP05067 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
APPP05067 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC32.44■■■□□ 2.78
APPP05067 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC32.44■■■□□ 2.78
APPP05067 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
APPP05067 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
APPP05067 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
APPP05067 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC32.42■■■□□ 2.78
APPP05067 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC32.41■■■□□ 2.78
APPP05067 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
APPP05067 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC32.4■■■□□ 2.78
APPP05067 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
APPP05067 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC32.37■■■□□ 2.77
APPP05067 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
APPP05067 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
APPP05067 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC32.35■■■□□ 2.77
APPP05067 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
APPP05067 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC32.34■■■□□ 2.77
APPP05067 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC32.34■■■□□ 2.77
APPP05067 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
APPP05067 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
APPP05067 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
APPP05067 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
APPP05067 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
APPP05067 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
APPP05067 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC32.29■■■□□ 2.76
APPP05067 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC32.26■■■□□ 2.75
APPP05067 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC32.25■■■□□ 2.75
APPP05067 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC32.25■■■□□ 2.75
APPP05067 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC32.23■■■□□ 2.75
APPP05067 DENR-202ENST00000455982 1052 ntTSL 5 BASIC32.22■■■□□ 2.75
APPP05067 HNRNPLP2-201ENST00000568980 1570 ntBASIC32.22■■■□□ 2.75
APPP05067 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
APPP05067 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
APPP05067 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC32.19■■■□□ 2.74
APPP05067 MIR762-201ENST00000390236 83 ntBASIC32.19■■■□□ 2.74
APPP05067 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
APPP05067 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
APPP05067 CHML-205ENST00000638160 705 ntTSL 3 BASIC32.16■■■□□ 2.74
APPP05067 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
APPP05067 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
APPP05067 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC32.14■■■□□ 2.74
APPP05067 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
APPP05067 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC32.13■■■□□ 2.73
APPP05067 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC32.12■■■□□ 2.73
APPP05067 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
APPP05067 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
APPP05067 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
APPP05067 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
APPP05067 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
APPP05067 AL161658.1-201ENST00000623641 1967 ntBASIC32.09■■■□□ 2.73
APPP05067 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC32.09■■■□□ 2.73
APPP05067 AP006261.1-201ENST00000584783 668 ntBASIC32.09■■■□□ 2.73
APPP05067 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
APPP05067 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC32.09■■■□□ 2.73
APPP05067 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
APPP05067 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC32.08■■■□□ 2.73
APPP05067 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC32.08■■■□□ 2.73
APPP05067 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
APPP05067 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
APPP05067 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC32.06■■■□□ 2.72
APPP05067 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC32.06■■■□□ 2.72
APPP05067 AC005559.1-201ENST00000589661 871 ntBASIC32.06■■■□□ 2.72
APPP05067 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC32.06■■■□□ 2.72
APPP05067 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC32.05■■■□□ 2.72
APPP05067 AL162393.1-201ENST00000437852 946 ntBASIC32.05■■■□□ 2.72
APPP05067 NRG1-221ENST00000614767 762 ntTSL 5 BASIC32.05■■■□□ 2.72
APPP05067 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC32.05■■■□□ 2.72
APPP05067 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
APPP05067 RPS2P35-201ENST00000443417 897 ntBASIC32.04■■■□□ 2.72
APPP05067 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC32.04■■■□□ 2.72
APPP05067 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
APPP05067 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
APPP05067 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
APPP05067 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC32.03■■■□□ 2.72
APPP05067 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC32.03■■■□□ 2.72
APPP05067 MIR3665-201ENST00000578708 105 ntBASIC32.02■■■□□ 2.72
APPP05067 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
APPP05067 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC32.01■■■□□ 2.72
APPP05067 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
APPP05067 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC32■■■□□ 2.71
APPP05067 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
APPP05067 DUX4L28-201ENST00000623687 678 ntBASIC31.99■■■□□ 2.71
APPP05067 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
APPP05067 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC31.98■■■□□ 2.71
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms